EY705685

Overview
NameEY705685
Unique NameEY705685
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length863
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY705685 vs. ExPASy Swiss-Prot
Match: PP420_ARATH (Pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Arabidopsis thaliana GN=At5g46580 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.231e-12
Identity = 40/153 (26.14%), Postives = 76/153 (49.67%), Query Frame = 3
Query:   12 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 470
            R+++L  E+   M + G   D   Y T+I    +     +A ++ E+M   G+  D V+Y+ ++++Y K GK+E    L +     G++ D    ++L     +AG+  G R  L+ M  +    N+  YN +++ +G+ GK   A ++F  M
Sbjct:  200 RQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEM 352          
BLAST of EY705685 vs. ExPASy Swiss-Prot
Match: PP269_ARATH (Pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Arabidopsis thaliana GN=At3g48250 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.231e-12
Identity = 46/159 (28.93%), Postives = 79/159 (49.69%), Query Frame = 3
Query:   33 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE----AYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYS 497
            EI  AM+  GY  D   Y  ++    K  RL+EA   ++QM   G   DI ++  LI  +CK  +L+ A      M ++GF+ D     +LIDG       +GA + L  M K   ++N++     Y  ++D+L K  K + A+++ + M+ ++   Y+
Sbjct:  391 EITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVK---NANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNYPAYA 546          
BLAST of EY705685 vs. ExPASy Swiss-Prot
Match: PPR5_ARATH (Putative pentatricopeptide repeat-containing protein At1g02420 OS=Arabidopsis thaliana GN=At1g02420 PE=3 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.075e-11
Identity = 41/111 (36.94%), Postives = 65/111 (58.56%), Query Frame = 3
Query:  126 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN------CIVDRLGKDGKI 440
            +EA  + E+M   G++ D+V+YN+LI++YCK+ ++E AY L+D+M ++    D  T+T +I GL   G    AR  L+ M + G   ++ AYN      CI  RLG   K+
Sbjct:  228 EEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKL 338          
BLAST of EY705685 vs. ExPASy Swiss-Prot
Match: PP328_ARATH (Pentatricopeptide repeat-containing protein At4g20740 OS=Arabidopsis thaliana GN=At4g20740 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.404e-11
Identity = 40/145 (27.59%), Postives = 73/145 (50.34%), Query Frame = 3
Query:   30 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 464
            LEIL  M+      D F Y  +I   V  G L  +    ++M  D ++ D+++Y TL+   CK+G++E  Y L  EM+ +    D+  + +LI+G    G ++ A    E +   G+ +++  YN ++  L    ++D A  +F+
Sbjct:  283 LEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQ 427          

HSP 2 Score: 70.0922 bits (170), Expect = 1.834e-11
Identity = 44/177 (24.86%), Postives = 84/177 (47.46%), Query Frame = 3
Query:   18 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNK-IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKR 530
            + L L +    K  G   +   +  ++    K GR++E  + +++M  +  + D+ +Y  +I     EG L+A+  + DEM +   + D   +  L+ GLCK G + +G  L +E   K I  D   E Y  +++    DGK+  A N++E +     + D   Y++++  LC   +
Sbjct:  244 FDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDR--EIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQ 418          
BLAST of EY705685 vs. ExPASy Swiss-Prot
Match: PP160_ARATH (Pentatricopeptide repeat-containing protein At2g17525, mitochondrial OS=Arabidopsis thaliana GN=At2g17525 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.404e-11
Identity = 42/163 (25.77%), Postives = 75/163 (46.01%), Query Frame = 3
Query:   60 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF------TYSSMVHNLCKAKR 530
            G+  D      V+      GR+ EA + +E++ + G ++D+V+ NTL+  YC  GK+  A     EME++G+  +  T+ +LI G C  G +  A      M       N   +N ++  L   G+ D  + + E M+  D+        Y+ +++   K  R
Sbjct:  278 GFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENR 440          
BLAST of EY705685 vs. ExPASy Swiss-Prot
Match: PP117_ARATH (Pentatricopeptide repeat-containing protein At1g73400, mitochondrial OS=Arabidopsis thaliana GN=At1g73400 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.404e-11
Identity = 44/158 (27.85%), Postives = 74/158 (46.84%), Query Frame = 3
Query:    6 RPRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT---LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 470
            R R  K  +++L  M   G+  + F YC  I  F + G + EA D  + M+T G  +   +  T   +I    K  K E  + L+  M   G   D  T+  +I+G+C A  +  A   L+ M+  G+  ++  YNC +  L ++ K D A+ ++  M
Sbjct:  280 RVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRM 437          
BLAST of EY705685 vs. ExPASy Swiss-Prot
Match: PP417_ARATH (Pentatricopeptide repeat-containing protein At5g44230 OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.395e-11
Identity = 42/150 (28.00%), Postives = 74/150 (49.33%), Query Frame = 3
Query:   72 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD--SNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 515
            D   +  +IAA+ ++G ++ A +  E + T     D+V++  ++  + +  K + A    D MEK G   D+ T    I    + G  K A   ++   K G+    ++   + ++D   K G ++ A+NVF SM  K+ FTYSSM+  L
Sbjct:  214 DVISWTELIAAYARVGNMECAAELFESLPTK----DMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGL 359          
BLAST of EY705685 vs. ExPASy Swiss-Prot
Match: PP380_ARATH (Pentatricopeptide repeat-containing protein At5g14080 OS=Arabidopsis thaliana GN=At5g14080 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.395e-11
Identity = 49/167 (29.34%), Postives = 83/167 (49.70%), Query Frame = 3
Query:   33 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT-----YSSMVHNLC 518
            E+LS+   KGY  +   Y  +I+   K GR++E+   +++M  +G+  D+  YN LI   CK   +  A  L DEM  +G + +  T+ +LI  L + G  + +    + M + G + +   Y  +++ L K+ KI+ A+ VF     +D  T      S  V NLC
Sbjct:  386 ELLSS---KGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTRRVLSEFVLNLC 549          
BLAST of EY705685 vs. ExPASy Swiss-Prot
Match: PPR79_ARATH (Putative pentatricopeptide repeat-containing protein At1g53330 OS=Arabidopsis thaliana GN=At1g53330 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.128e-11
Identity = 43/165 (26.06%), Postives = 80/165 (48.48%), Query Frame = 3
Query:   36 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---VKDSFTYSSMVHNLCK 521
            IL  M  KG   D   Y  +I  F      + A   +++MV  G++ D++SYN ++ ++ +  K E A  L ++M ++G   D  ++ I+ DGLC+    + A + L+ M   G+    +     + +L + GK++    V  S+      D+  +S M+  +CK
Sbjct:  280 ILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSLHRGIAGDADVWSVMIPTMCK 444          
BLAST of EY705685 vs. ExPASy Swiss-Prot
Match: PP383_ARATH (Pentatricopeptide repeat-containing protein At5g15010, mitochondrial OS=Arabidopsis thaliana GN=At5g15010 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.335e-11
Identity = 47/158 (29.75%), Postives = 75/158 (47.47%), Query Frame = 3
Query:   63 YTFDGFGYCTVIAAFVK-IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM-NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKR 530
            Y FD   +  V+  +   IG  +EA     +M   GV+ D+VSY+++I+ Y K G L     L D M+K+  E D+  +  ++  L KA  +  AR  ++ M  + G + N+  YN ++  L K  K + A  VF+ M  K  F      H   +  R
Sbjct:  262 YPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILR 419          
The following BLAST results are available for this feature:
BLAST of EY705685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 136
Match NameE-valueIdentityDescription
PP420_ARATH8.231e-1226.14Pentatricopeptide repeat-containing protein At5g46... [more]
PP269_ARATH8.231e-1228.93Pentatricopeptide repeat-containing protein At3g48... [more]
PPR5_ARATH1.075e-1136.94Putative pentatricopeptide repeat-containing prote... [more]
PP328_ARATH1.404e-1127.59Pentatricopeptide repeat-containing protein At4g20... [more]
PP160_ARATH1.404e-1125.77Pentatricopeptide repeat-containing protein At2g17... [more]
PP117_ARATH1.404e-1127.85Pentatricopeptide repeat-containing protein At1g73... [more]
PP417_ARATH2.395e-1128.00Pentatricopeptide repeat-containing protein At5g44... [more]
PP380_ARATH2.395e-1129.34Pentatricopeptide repeat-containing protein At5g14... [more]
PPR79_ARATH3.128e-1126.06Putative pentatricopeptide repeat-containing prote... [more]
PP383_ARATH5.335e-1129.75Pentatricopeptide repeat-containing protein At5g15... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-046-F04-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY705685 ID=EY705685; Name=EY705685; organism=Citrus sinensis; type=EST; length=863bp
CCACGCGTCCGAGGAAGTATAAACTGGGACTTGAGATATTATCTGCAATG
AAAAGAAAAGGGTATACATTTGATGGTTTTGGTTACTGTACTGTCATAGC
TGCATTTGTTAAGATTGGTAGGTTAAAAGAGGCAACTGATTACATGGAGC
AAATGGTGACAGATGGTGTCCAGCTTGATATTGTGTCTTACAACACACTA
ATTAATTTATACTGTAAAGAAGGTAAACTGGAAGCTGCCTATTTGTTGTT
GGATGAGATGGAGAAACAAGGGTTTGAATGTGATAAGTATACCCACACAA
TTTTGATTGATGGACTGTGCAAGGCAGGTAATATCAAGGGGGCACGGTTA
CATTTGGAGTACATGAATAAGATTGGCTTTGACTCAAACTTGGAAGCTTA
CAACTGTATTGTTGATAGGTTGGGTAAAGATGGTAAGATAGATCATGCAA
TTAATGTTTTTGAATCGATGGAGGTAAAGGATTCATTTACCTACTCTTCC
ATGGTGCACAACCTTTGCAAGGCCAAAAGGCTCCCCTCTGCATCCAAGCT
CCTACTATCTTGTTTAAAAAGTGGTGTGAGAATTCTGAAGTCTNGCTCAA
AAGCTGTTGTTGATGGCCTTCGCCATTCAGGTTGTAAAAGAGAAGCGAAG
AAGAATTCAGTCTAAATCCGTATGGCCAAAATATCACATTAGTTGGATGG
GTTTGGGAATACTTGCTGAAATTTTGTGGGTTAAGAGGCTCCCTTTGAGG
TCTAAAATAAAACAAGTCCTAAAAAGATAATATCACTGAATTGTGTGTAA
ATGAATCTCCAAAAATATTTGAATGCTTCTAAAAGGGAATTTTTCTGGAG
CTCCTATTTTCTG
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