EY705684
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY705684 vs. ExPASy Swiss-Prot
Match: LDL2_ARATH (Lysine-specific histone demethylase 1 homolog 2 OS=Arabidopsis thaliana GN=LDL2 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.759e-12 Identity = 52/152 (34.21%), Postives = 78/152 (51.32%), Query Frame = 3 Query: 9 PKVFWPN-VEFLGVVSDTSYGCSYFLNL---HKATGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKI-------LPDASSPIQYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPVDN-LFFAGEATSMSYPGSVHGAFSTGLMAA 428 P VFW + ++ G ++++S F H +G LV + AG+ A+ E + +L+ I +PD PIQ + + WG+D S GSYS+ VG S Y+ L V N LFFAGEAT+ +P ++HGA+ +GL A Sbjct: 442 PSVFWGDELDTFGCLNESSINRGEFFLFYAYHTVSGGPALVALVAGEAAQRFECTEPSVLLHRVLKKLRGIYGPKGVVVPD---PIQTVCTRWGSDPLSYGSYSHVRVGSSGVDYDILAESVSNRLFFAGEATTRQHPATMHGAYLSGLREA 590
BLAST of EY705684 vs. ExPASy Swiss-Prot
Match: KDM1_MOUSE (Lysine-specific histone demethylase 1 OS=Mus musculus GN=Kdm1 PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 6.413e-12 Identity = 53/158 (33.54%), Postives = 76/158 (48.10%), Query Frame = 3 Query: 12 KVFW-PNVEFLGVVSDTSYGCS---YFLNLHKATGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILPDAS--SPIQYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPVD-------------NLFFAGEATSMSYPGSVHGAFSTGLMAA 428 +VFW P+V G V T+ F NL+KA +L+ + AG+ A +E +SD+ LK I ++ P + +VS W D + GSYSY G S + Y+ + P+ LFFAGE T +YP +VHGA +GL A Sbjct: 669 RVFWDPSVNLFGHVGSTTASRGELFLFWNLYKAP---ILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREA 823
BLAST of EY705684 vs. ExPASy Swiss-Prot
Match: KDM1_HUMAN (Lysine-specific histone demethylase 1 OS=Homo sapiens GN=KDM1 PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 6.413e-12 Identity = 53/158 (33.54%), Postives = 76/158 (48.10%), Query Frame = 3 Query: 12 KVFW-PNVEFLGVVSDTSYGCS---YFLNLHKATGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILPDAS--SPIQYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPVD-------------NLFFAGEATSMSYPGSVHGAFSTGLMAA 428 +VFW P+V G V T+ F NL+KA +L+ + AG+ A +E +SD+ LK I ++ P + +VS W D + GSYSY G S + Y+ + P+ LFFAGE T +YP +VHGA +GL A Sbjct: 668 RVFWDPSVNLFGHVGSTTASRGELFLFWNLYKAP---ILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREA 822 The following BLAST results are available for this feature:
BLAST of EY705684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >EY705684 ID=EY705684; Name=EY705684; organism=Citrus sinensis; type=EST; length=874bpback to top |