EY660088
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY660088 vs. ExPASy Swiss-Prot
Match: GLYM_YEAST (Serine hydroxymethyltransferase, mitochondrial OS=Saccharomyces cerevisiae GN=SHM1 PE=1 SV=2) HSP 1 Score: 314.694 bits (805), Expect = 4.499e-85 Identity = 156/262 (59.54%), Postives = 196/262 (74.81%), Query Frame = 3 Query: 12 QWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDT-KKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVEEITXQGXEC-FMIMKKK*SSCLSWTPGGPH 791 Q + LIPSENFTS +VM +GS + NKYSEGYPG RYYGGNE ID +ESLCQ RALE + LDP KWGVNVQ LSG+P+N VY+A++ +R+M LDLP GGHLSHGYQ + IS +S +F++MPY ++ +TG IDYD L+ A FRPK+IVAG SAY+RL DY R +++ A +++DMAHISGLVAA V+PSPFE++D+VTTTTHKSLRGPRGAMIFFRKG++ +T +G E + + KK S GGPH Sbjct: 51 QKHSITLIPSENFTSKAVMDLLGSELQNKYSEGYPGERYYGGNEIIDKSESLCQARALELYGLDPAKWGVNVQPLSGAPANLYVYSAIMNVGERLMGLDLPDGGHLSHGYQLKSGTPISFISKYFQSMPYHVDHTTGLIDYDNLQVLAKAFRPKVIVAGTSAYSRLIDYARFKEISQGCGAYLMSDMAHISGLVAANVVPSPFEHSDIVTTTTHKSLRGPRGAMIFFRKGIKSVTKKGKEIPYELEKKINFSVFPGHQGGPH 312
BLAST of EY660088 vs. ExPASy Swiss-Prot
Match: GLYC_ENCCU (Serine hydroxymethyltransferase, cytosolic OS=Encephalitozoon cuniculi GN=SHMT-1 PE=3 SV=2) HSP 1 Score: 271.166 bits (692), Expect = 4.720e-73 Identity = 130/230 (56.52%), Postives = 171/230 (74.35%), Query Frame = 3 Query: 12 QWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGV 701 Q K + LI SEN+ S M+A GSV+TNKYSEG G RYYGG ++D E LCQKRALE F LDP+ WGVNVQ SGSP+NF +YTA++ P RIM LDLP GGHL+HGY+T T+KISA S++F++ PY + S G IDY+ LEK+ T F P +++ G SAY+R DY+R++ + + A + AD++HIS LVA+G++ SPFE+ D+V TTT K LRGPRGA+IF+R+ V Sbjct: 32 QKKTINLIASENYAHQSAMEACGSVLTNKYSEGRVGERYYGGTHWVDRIELLCQKRALELFGLDPDVWGVNVQPYSGSPANFAIYTAVVPPGGRIMGLDLPSGGHLTHGYKTKTRKISASSVYFDSRPYTVG-SNGLIDYEGLEKTFTDFLPHILICGYSAYSRDIDYKRLQSIAGRNGAFLFADISHISPLVASGLMNSPFEHCDIVMTTTQKGLRGPRGALIFYRRAV 260 HSP 2 Score: 25.7942 bits (55), Expect = 4.720e-73 Identity = 14/39 (35.90%), Postives = 22/39 (56.41%), Query Frame = 2 Query: 785 PTHHTITGLAXAL----NRHYSEY--KAIRSKSEQCSKL 883 P +HTI G+A AL ++EY + + + E CS+L Sbjct: 285 PHNHTIAGIASALLHAGTPEFAEYTRRVVENSRELCSRL 323
BLAST of EY660088 vs. ExPASy Swiss-Prot
Match: GLYA_DESAA (Serine hydroxymethyltransferase OS=Desulfatibacillum alkenivorans (strain AK-01) GN=glyA PE=3 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 2.034e-61 Identity = 125/225 (55.56%), Postives = 152/225 (67.56%), Query Frame = 3 Query: 24 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKG 698 LELI SEN S +VM A GSVMTNKY+EGYPG RYYGG E++D+AE+L + RA E F+ D NVQ SGS +N VY ALL+P D ++ +DL HGGHL+HG +S F + Y + E TG IDYDQL A +PKLIVAGASAY R+ D+ + K+ + A ++ DMAHI+GLVAAG PSP YADVVTTTTHK+LRGPRG MI KG Sbjct: 28 LELIASENIASPAVMAAQGSVMTNKYAEGYPGHRYYGGCEFVDVAENLARDRAKELFQADY----ANVQPHSGSQANMGVYFALLEPGDTVLGMDLSHGGHLTHG-----SPVSFSGRIFNFIHYGVKEKTGTIDYDQLRSLAKEHKPKLIVAGASAYPRIIDFPELEKIARETGAYLMVDMAHIAGLVAAGEHPSPLPYADVVTTTTHKTLRGPRGGMILSNKG 243
BLAST of EY660088 vs. ExPASy Swiss-Prot
Match: GLYA_THETN (Serine hydroxymethyltransferase OS=Thermoanaerobacter tengcongensis GN=glyA PE=3 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 1.009e-60 Identity = 117/224 (52.23%), Postives = 157/224 (70.09%), Query Frame = 3 Query: 24 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRK 695 +ELI SENF S +VM+A+G+ +TNKY+EGYPG RYYGG EY+DMAE L ++R + F + NVQ SG+ +N Y ALLKP D ++ +DL HGGHL+HG K++ + + Y + E TGYIDYDQ+E A +PKLIVAGASAY R+ D+++ R++ +K A ++ DMAHI+GLVAAG+ P+P YADVVTTTTHK+LRGPRG I ++ Sbjct: 28 IELIASENFVSRAVMEAMGTPLTNKYAEGYPGRRYYGGCEYVDMAEELARERLKKLFGAEH----ANVQPHSGAQANMAAYFALLKPGDTVLGMDLAHGGHLTHG-----SKVNFSGQIYNFVSYGVREDTGYIDYDQVEDLAKKHKPKLIVAGASAYPRIIDFKKFREIADKVGAYLMVDMAHIAGLVAAGLHPNPVPYADVVTTTTHKTLRGPRGGAILCKQ 242
BLAST of EY660088 vs. ExPASy Swiss-Prot
Match: GLYA_NITSB (Serine hydroxymethyltransferase OS=Nitratiruptor sp. (strain SB155-2) GN=glyA PE=3 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 1.318e-60 Identity = 121/220 (55.00%), Postives = 160/220 (72.73%), Query Frame = 3 Query: 24 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMI 683 LE+I SENFTS +VM+A+GSV TNKY+EGYPG RYYGG EY D E L +RA E F + VNVQ SGS +N VY ALLKP+D+I+ +DL HGGHL+HG K++A +++ Y +N+ G+IDYD++ A + +PKLIV GASAY R+ D+++ R++ ++ A+++AD+AHI+GLVAAG PSPF Y DVVTTTTHK+LRGPRG MI Sbjct: 26 LEMIASENFTSPAVMEAMGSVFTNKYAEGYPGKRYYGGCEYADAIEELAIQRAKELFGCE----FVNVQPHSGSQANQGVYLALLKPYDKILGMDLSHGGHLTHG-----AKVNASGKIYQSFFYGVNDE-GWIDYDRVLDIAKIVKPKLIVCGASAYPRVIDFKKFREIADEVGALLMADIAHIAGLVAAGEHPSPFPYCDVVTTTTHKTLRGPRGGMI 235
BLAST of EY660088 vs. ExPASy Swiss-Prot
Match: GLYA_THEPX (Serine hydroxymethyltransferase OS=Thermoanaerobacter sp. (strain X514) GN=glyA PE=3 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 5.009e-60 Identity = 115/224 (51.34%), Postives = 157/224 (70.09%), Query Frame = 3 Query: 24 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRK 695 +ELI SENF S +VM+A+GS +TNKY+EGYP RYYGG EY+D+AE L ++R + F + NVQ SG+ +N Y AL+KP D ++ +DL HGGHL+HG K++ + + Y + E TGYIDYD++E+ A +PKLIVAGASAY R+ D++R R++ +K A ++ DMAHI+GLVAAG+ P+P YADVVTTTTHK+LRGPRG I ++ Sbjct: 28 IELIASENFVSRAVMEAMGSPLTNKYAEGYPNKRYYGGCEYVDIAEELARERLKKLFGAEH----ANVQPHSGAQANMAAYFALIKPGDTVLGMDLAHGGHLTHG-----SKVNFSGQIYNFVSYGVREDTGYIDYDEVERVAKKHKPKLIVAGASAYPRIIDFKRFREIADKVGAYLMVDMAHIAGLVAAGLHPNPVPYADVVTTTTHKTLRGPRGGAILCKE 242
BLAST of EY660088 vs. ExPASy Swiss-Prot
Match: GLYA_THEP3 (Serine hydroxymethyltransferase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=glyA PE=3 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 5.009e-60 Identity = 115/224 (51.34%), Postives = 157/224 (70.09%), Query Frame = 3 Query: 24 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRK 695 +ELI SENF S +VM+A+GS +TNKY+EGYP RYYGG EY+D+AE L ++R + F + NVQ SG+ +N Y AL+KP D ++ +DL HGGHL+HG K++ + + Y + E TGYIDYD++E+ A +PKLIVAGASAY R+ D++R R++ +K A ++ DMAHI+GLVAAG+ P+P YADVVTTTTHK+LRGPRG I ++ Sbjct: 28 IELIASENFVSRAVMEAMGSPLTNKYAEGYPNKRYYGGCEYVDIAEELARERLKKLFGAEH----ANVQPHSGAQANMAAYFALIKPGDTVLGMDLAHGGHLTHG-----SKVNFSGQIYNFVSYGVREDTGYIDYDEVERVAKKHKPKLIVAGASAYPRIIDFKRFREIADKVGAYLMVDMAHIAGLVAAGLHPNPVPYADVVTTTTHKTLRGPRGGAILCKE 242
BLAST of EY660088 vs. ExPASy Swiss-Prot
Match: GLYA_BAUCH (Serine hydroxymethyltransferase OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=glyA PE=3 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 8.544e-60 Identity = 126/259 (48.65%), Postives = 167/259 (64.48%), Query Frame = 3 Query: 12 QWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVEEITXQGXECFMIMKKK*SSCLSWTPGGP 788 Q + +ELI SEN+TS VMQA GS++TNKY+EGY G RYYGG Y+D E+L RA F D NVQ SGS +NF VYTALLKP D I+ ++L HGGHL+HG ++ + + Y +N++ GYIDY+QL K AT+ +PK+I+ G SAY+R+ D++ +R+V + KA + DMAHI+GLVAAGV P+P YADVVTTTTHK+L GPRG +I + G +E + KK S+ GGP Sbjct: 26 QEEHIELIASENYTSPRVMQAQGSILTNKYAEGYSGKRYYGGCVYVDQVETLAIDRAKALFECDY----ANVQPHSGSQANFAVYTALLKPGDTILGMNLAHGGHLTHG-----ASVNFSGKMYNVISYGVNKN-GYIDYEQLNKLATMHKPKMIIGGFSAYSRVVDWDIMRQVADSIKAFLFVDMAHIAGLVAAGVYPNPVPYADVVTTTTHKTLAGPRGGLILAQGGSKE----------MYKKLDSAVFPGAQGGP 264
BLAST of EY660088 vs. ExPASy Swiss-Prot
Match: GLYA_ACIBL (Serine hydroxymethyltransferase OS=Acidobacteria bacterium (strain Ellin345) GN=glyA PE=3 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 1.903e-59 Identity = 119/245 (48.57%), Postives = 162/245 (66.12%), Query Frame = 3 Query: 6 RPQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIF----FRKGVEEITXQGXE 728 R Q +GLELI SENF S +V+QA GSV TNKY+EGYPG RYYGG EY D+ E+L + RA E F + NVQ SGS +N + Y A+L+P D I+ L+L HGGHL+HG+ + + ++ +PY + + T IDYD+LEK A PK+IV G SAY R++D++R+R++ +K A+ + DMAH +GLVA G PSP +A VVTTTTHK+LRGPR MI F ++++T G + Sbjct: 25 RRQHEGLELIASENFVSEAVLQAAGSVFTNKYAEGYPGKRYYGGCEYADVVENLARDRAKELFGAEH----ANVQPHSGSSANMEAYGAILQPGDTILGLNLAHGGHLTHGHPLNFSGKT-----YKIVPYGVTKETETIDYDELEKLALEHHPKVIVGGGSAYPRIFDFKRMREIADKAGALFMVDMAHFAGLVAGGAHPSPVPHAHVVTTTTHKTLRGPRAGMILSKQEFAAAIDKVTFPGMQ 260
BLAST of EY660088 vs. ExPASy Swiss-Prot
Match: GLYA_LEGPH (Serine hydroxymethyltransferase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=glyA PE=3 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 5.538e-59 Identity = 126/261 (48.28%), Postives = 165/261 (63.22%), Query Frame = 3 Query: 6 RPQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVEEITXQGXECFMIMKKK*SSCLSWTPGGP 788 R Q + +ELI SEN+ S V++A GSV+TNKY+EGYPG RYYGG E++D+AE L RA F VNVQ SGS +N V ALL P D M + LPHGGHL+HG K++ + ++ Y ++ +TG IDYD LEK A +PKLI+AG SAY+R+ D+ R R++ +K A ++AD+AH++GLVA G+ PSP YADVVTTTTHK+LRGPRG +I ++ E I KK SS GGP Sbjct: 24 RRQEEHIELIASENYVSPRVLEAQGSVLTNKYAEGYPGKRYYGGCEFVDVAEELAISRAKLLFGAHY----VNVQPHSGSQANAAVMMALLSPGDTFMGMALPHGGHLTHG-----SKVNFSGKLYHSVEYGVDSNTGLIDYDALEKLALQHKPKLIIAGFSAYSRILDWARFREIADKVGAYLMADIAHVAGLVAVGLYPSPVPYADVVTTTTHKTLRGPRGGLILCKENEE-----------IEKKLNSSVFPGMQGGP 264 The following BLAST results are available for this feature:
BLAST of EY660088 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY660088 ID=EY660088; Name=EY660088; organism=Citrus sinensis; type=EST; length=891bpback to top |