EY660088
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660088 vs. ExPASy Swiss-Prot
Match: GLYA_CHLP8 (Serine hydroxymethyltransferase OS=Chlorobaculum parvum (strain NCIB 8327) GN=glyA PE=3 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 2.104e-58 Identity = 125/268 (46.64%), Postives = 171/268 (63.81%), Query Frame = 3 Query: 3 TRPQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRK------GVEEITXQGXECFMIMKKK*SSCLSWTPGGP 788 TR Q + LELI SENFTS +VM+A GSVMTNKY+EGYPG RYYGG E++D+AE+L + RA + F + VNVQ SGS +N V A+LKP D IM LDL HGGHL+HG K++ FF+ Y +++ TG ID + +E+ A +PKLI+ GASAY++ +D++ R++ +K A ++AD+AH +GLVAAG+ +P + VTTTTHK+LRGPRG MI K G+ T G M+ + + + GGP Sbjct: 21 TRRQTETLELIASENFTSTAVMEACGSVMTNKYAEGYPGKRYYGGCEFVDVAENLARDRAKKLFGCEY----VNVQPHSGSSANMAVLFAVLKPGDSIMGLDLSHGGHLTHG-----SKVNFSGQFFDAHSYGVDKETGIIDMNAVEEMALKVKPKLIITGASAYSQGFDFKAFREIADKVGAFLMADIAHPAGLVAAGLSANPVPHCHFVTTTTHKTLRGPRGGMIMMGKDFENPMGITVNTKNGPRVKMMSEVIDAEVMPGIQGGP 279
BLAST of EY660088 vs. ExPASy Swiss-Prot
Match: GLYA_SOLUE (Serine hydroxymethyltransferase OS=Solibacter usitatus (strain Ellin6076) GN=glyA PE=3 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 3.590e-58 Identity = 115/224 (51.34%), Postives = 156/224 (69.64%), Query Frame = 3 Query: 24 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRK 695 LELI SENFTS +V++A GSV TNKY+EGYPG RYYGG EY D+ E+L ++RA + F + VNVQ SGS +N Y A++ P D +M L+L HGGHL+HG+ + + ++ +PY + + IDYD++EK A +PK+I+AGASAY R+ D+ R RK+ + A+ L DMAHISGLVAAGV P+P E+AD+VT+TTHK+LRGPR +I R+ Sbjct: 33 LELIASENFTSEAVLEATGSVFTNKYAEGYPGKRYYGGCEYTDVVENLARERASKLFGAEY----VNVQPHSGSQANQAAYGAVVSPGDTVMGLNLAHGGHLTHGHALNFSGKT-----YKIVPYNVRKEDELIDYDEVEKLAREHQPKMIIAGASAYPRIIDFARFRKIADAVGAVFLVDMAHISGLVAAGVHPNPCEFADIVTSTTHKTLRGPRAGIILARE 247
BLAST of EY660088 vs. ExPASy Swiss-Prot
Match: GLYA_GEOMG (Serine hydroxymethyltransferase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=glyA PE=3 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 3.590e-58 Identity = 117/231 (50.65%), Postives = 157/231 (67.97%), Query Frame = 3 Query: 3 TRPQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRK 695 T Q LELI SENF S +VM+A GSV+TNKY+EGYPG RYYGG ++D+ E+L +RA E F D NVQ SGS +N VY ++LKP D I+ ++L HGGHL+HG ++ FF +PY +++ T ID++++E+ A +PKLIV GASAY R+ D+ R + +K A+++ DMAHI+GLVAAG+ PSP YA+ VTTTTHK+LRGPRG MI R+ Sbjct: 19 TERQEYNLELIASENFVSEAVMEAQGSVLTNKYAEGYPGKRYYGGCHHVDVVENLAIERAKELFGADH----ANVQPHSGSQANMAVYFSVLKPGDTILGMNLSHGGHLTHG-----SPVNFSGRFFNVVPYGVSQETETIDFNEVERLALEHKPKLIVVGASAYPRVLDFAAFRAIADKVGALVMVDMAHIAGLVAAGLHPSPVPYAEFVTTTTHKTLRGPRGGMILCRE 240
BLAST of EY660088 vs. ExPASy Swiss-Prot
Match: GLYA_DESAP (Serine hydroxymethyltransferase OS=Desulforudis audaxviator (strain MP104C) GN=glyA PE=3 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 3.590e-58 Identity = 119/220 (54.09%), Postives = 150/220 (68.18%), Query Frame = 3 Query: 24 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMI 683 LELI SENF S +V++A GSV+TNKY+EGYPGARYYGG EY+D+ ES+ +RA E F NVQ SG+ +N Y A L+P D IM + L HGGHL+HG KI+ +F +PY + E TG IDYD++ A RPKLIV GASAY R D+ R+R + + A+++ DMAHI+GL+AAG+ SP YADVVTTTTHK+LRGPRG MI Sbjct: 29 LELIASENFVSRAVLEAQGSVLTNKYAEGYPGARYYGGCEYVDIVESVAIRRAKEIFGAGH----ANVQPHSGAQANMAAYFAFLEPGDTIMGMRLAHGGHLTHG-----AKINFSGRYFRYVPYGVEEETGRIDYDRMHAIAREHRPKLIVGGASAYPRELDFARMRAIADDVGALLMIDMAHIAGLIAAGLHMSPVPYADVVTTTTHKTLRGPRGGMI 239
BLAST of EY660088 vs. ExPASy Swiss-Prot
Match: GLYA_PARD8 (Serine hydroxymethyltransferase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=glyA PE=3 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 4.688e-58 Identity = 112/231 (48.48%), Postives = 158/231 (68.40%), Query Frame = 3 Query: 12 QWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVE 704 Q KG+ELI SENF S VMQA+GS +TNKY+EGYPG RYYGG E +D +E++ +R + F + W NVQ SG+ +N V+ A+L P D + L+L HGGHLSHG +++ + + Y + E TG +DYDQ+E+ A +PKLIV G SAY+R +DY+R+R++ +K A+++ DMAH +GL+AAG++ +P EYA +VT+TTHK+LRGPRG +I K E Sbjct: 18 QLKGIELIASENFVSDQVMQAMGSCLTNKYAEGYPGKRYYGGCEVVDQSETIAIERLKKLFNAE---WA-NVQPHSGAQANAAVFFAVLNPGDTFLGLNLSHGGHLSHG-----SPVNSSGVLYHATEYNVKEDTGRVDYDQMEEVALREKPKLIVGGGSAYSRDWDYKRMREIADKVGALLMIDMAHPAGLIAAGLLNNPLEYAHIVTSTTHKTLRGPRGGIILLGKDFE 239
BLAST of EY660088 vs. ExPASy Swiss-Prot
Match: GLYA_CHLPB (Serine hydroxymethyltransferase OS=Chlorobium phaeobacteroides (strain BS1) GN=glyA PE=3 SV=2) HSP 1 Score: 224.942 bits (572), Expect = 4.688e-58 Identity = 126/267 (47.19%), Postives = 169/267 (63.30%), Query Frame = 3 Query: 6 RPQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRK------GVEEITXQGXECFMIMKKK*SSCLSWTPGGP 788 R Q + LELI SENF S +VM+A GSVMTNKY+EGYPG RYYGG E++D+AE+L + RA + F D VNVQ SGS +N V A+LKP DRIM LDL HGGHL+HG K++ FE Y ++ TG ID +++E+ A RPKLI+ GASAY++ +D++ R V +K A ++AD+AH +GL+AAG++ P + VTTTTHK+LRGPRG MI K G+ T +G M+ + + + GGP Sbjct: 22 RRQTETLELIASENFASRAVMEACGSVMTNKYAEGYPGKRYYGGCEFVDIAENLARDRAKKLFGCDY----VNVQPHSGSSANMGVLFAVLKPGDRIMGLDLSHGGHLTHG-----SKVNFSGQLFEAHSYGVDRETGCIDMNKVEEMALEVRPKLIICGASAYSQGFDFKAFRDVADKVGAFLMADIAHPAGLIAAGLLNDPMPHCHFVTTTTHKTLRGPRGGMIMMGKDFENPLGITVKTKKGSRTKMMSEVIDAEIMPGIQGGP 279
BLAST of EY660088 vs. ExPASy Swiss-Prot
Match: GLYA_BACV8 (Serine hydroxymethyltransferase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=glyA PE=3 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 4.688e-58 Identity = 113/228 (49.56%), Postives = 156/228 (68.42%), Query Frame = 3 Query: 12 QWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRK 695 Q KG+ELI SENF S VMQA+GS +TNKY+EGYPG RYYGG E +D +E + R + F + W NVQ SG+ +N V+ A+L P D+ M L+L HGGHLSHG +T I + Y LN+ TG +DYDQ+E+ A +PK+I+ G SAY+R +DY+R+R++ +K AI++ DMAH +GL+AAG++ +P +YA +VT+TTHK+LRGPRG +I K Sbjct: 18 QLKGIELIASENFVSDQVMQAMGSCLTNKYAEGYPGKRYYGGCEVVDQSEQIAIDRLKQIFGAE---WA-NVQPHSGAQANAAVFLAVLNPGDKFMGLNLAHGGHLSHGSLVNTS-----GIIYTPCEYNLNKETGRVDYDQMEEIALREKPKMIIGGGSAYSREWDYKRMREIADKVGAILMIDMAHPAGLIAAGLLDNPVKYAHIVTSTTHKTLRGPRGGVIMMGK 236
BLAST of EY660088 vs. ExPASy Swiss-Prot
Match: GLYA2_PSEF5 (Serine hydroxymethyltransferase 2 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=glyA2 PE=3 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 4.688e-58 Identity = 117/229 (51.09%), Postives = 157/229 (68.56%), Query Frame = 3 Query: 24 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVEEI 710 +ELI SEN+TS VMQA GS +TNKY+EGYPG RYYGG E++D E+L +RA + F D NVQ SGS +N +VY ALL+ D I+ + L HGGHL+HG K+S+ + + Y ++ TG IDYD++E+ A +PK+IVAG SAY++ D+ R R++ +K A++ DMAH++GLVAAG+ P+P YADVVTTTTHK+LRGPRG +I K EEI Sbjct: 30 IELIASENYTSKRVMQAQGSGLTNKYAEGYPGKRYYGGCEHVDKVEALAIERAKQLFGADY----ANVQPHSGSSANSEVYLALLQAGDTILGMSLAHGGHLTHG-----AKVSSSGKLYNAVQYGIDTRTGLIDYDEVERLAVEHKPKMIVAGFSAYSKTLDFPRFRQIADKVGALLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTLRGPRGGLI-LAKANEEI 248
BLAST of EY660088 vs. ExPASy Swiss-Prot
Match: GLYA_GEOSM (Serine hydroxymethyltransferase OS=Geobacter sp. (strain M21) GN=glyA PE=3 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 6.123e-58 Identity = 116/231 (50.22%), Postives = 156/231 (67.53%), Query Frame = 3 Query: 3 TRPQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRK 695 T Q LELI SENF S +V++A GSV+TNKY+EGYPG RYYGG +D+ E+L RA E F D VNVQ SGS +N VY ++LKP D ++ ++L HGGHL+HG ++ F +PY +++ T IDY++ E+ A +PK+IV GASAY R+ D+E R++ +K A+++ DMAHI+GLVAAG+ PSP YA+ VTTTTHK+LRGPRG MI R+ Sbjct: 19 TERQEYNLELIASENFVSPAVLEAQGSVLTNKYAEGYPGKRYYGGCHCVDVVENLAIDRAKELFGADH----VNVQPHSGSQANMAVYFSVLKPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLFNIVPYGVSKETQTIDYEETERLALEHKPKMIVVGASAYPRIIDFEAFRRIADKVGAVVMVDMAHIAGLVAAGLHPSPVPYAEFVTTTTHKTLRGPRGGMIMCRE 240
BLAST of EY660088 vs. ExPASy Swiss-Prot
Match: GLYA_GEOBB (Serine hydroxymethyltransferase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=glyA PE=3 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 6.123e-58 Identity = 116/231 (50.22%), Postives = 156/231 (67.53%), Query Frame = 3 Query: 3 TRPQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRK 695 T Q LELI SENF S +V++A GSV+TNKY+EGYPG RYYGG +D+ E+L RA E F D VNVQ SGS +N VY ++LKP D ++ ++L HGGHL+HG ++ F +PY +++ T IDY++ E+ A +PK+IV GASAY R+ D+E R++ +K A+++ DMAHI+GLVAAG+ PSP YA+ VTTTTHK+LRGPRG MI R+ Sbjct: 19 TERQEYNLELIASENFVSPAVLEAQGSVLTNKYAEGYPGKRYYGGCHCVDVVENLAIDRAKELFGADH----VNVQPHSGSQANMAVYFSVLKPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLFNIVPYGVSKETQTIDYEETERLALEHKPKMIVVGASAYPRIIDFEAFRRIADKVGAVVMVDMAHIAGLVAAGLHPSPVPYAEFVTTTTHKTLRGPRGGMIMCRE 240 The following BLAST results are available for this feature:
BLAST of EY660088 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY660088 ID=EY660088; Name=EY660088; organism=Citrus sinensis; type=EST; length=891bpback to top |