EY660088
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY660088 vs. ExPASy Swiss-Prot
Match: GLYA_PELLD (Serine hydroxymethyltransferase OS=Pelodictyon luteolum (strain DSM 273) GN=glyA PE=3 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 1.044e-57 Identity = 121/265 (45.66%), Postives = 169/265 (63.77%), Query Frame = 3 Query: 12 QWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRK------GVEEITXQGXECFMIMKKK*SSCLSWTPGGP 788 Q + LELI SENFTS +VMQA GSVMTNKY+EGYPG RYYGG E++D+AE L ++RA + F + VNVQ SGS +N V ++LKP DRIM LDL HGGHL+HG ++ F+ Y ++ TG ID +++E+ A F+P+LI+ GASAY++ +D++ R++ +K A ++AD+AH +GL+AAG++ P + VTTTTHK+LRGPRG MI K G+ T G M+ + + + GGP Sbjct: 24 QMETLELIASENFTSRAVMQACGSVMTNKYAEGYPGKRYYGGCEFVDIAEDLARERARKLFGCEY----VNVQPHSGSSANMAVLFSVLKPGDRIMGLDLSHGGHLTHG-----SSVNFSGQMFDARSYGVDRETGIIDMNKVEEMALDFKPRLIICGASAYSQGFDFKAFREIADKVGAFLMADIAHPAGLIAAGLLTDPMPHCHFVTTTTHKTLRGPRGGMIMMGKDFENPMGITIKTKNGPRVKMMSEVMDAEVMPGIQGGP 279
BLAST of EY660088 vs. ExPASy Swiss-Prot
Match: GLYA_METCA (Serine hydroxymethyltransferase OS=Methylococcus capsulatus GN=glyA PE=3 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 1.044e-57 Identity = 115/233 (49.36%), Postives = 155/233 (66.52%), Query Frame = 3 Query: 6 RPQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVE 704 R Q +ELI SEN+ S V+QA G+V+TNKY+EGYPG RYYGG EY+D+ E+L +RA F D NVQ SGS +N VY ALLKP D ++ + L HGGHL+HG K++ + + Y LN TG IDYDQ+++ A RPK+IVAG SAY+++ D++R R + + A ++ DMAH++GL+AAG+ PSP + ADV TTTTHK+LRGPRG +I + E Sbjct: 24 RRQEDHIELIASENYASPRVLQAQGTVLTNKYAEGYPGKRYYGGCEYVDIVETLAIERAKRLFGADY----ANVQPHSGSQANAAVYMALLKPGDTVLGMSLAHGGHLTHG-----AKVNFSGKIYNAVQYGLNPETGEIDYDQVDELAREHRPKMIVAGFSAYSQVVDWQRFRAIADSVGAWLMVDMAHVAGLIAAGLYPSPVQIADVTTTTTHKTLRGPRGGLILAKANPE 247
BLAST of EY660088 vs. ExPASy Swiss-Prot
Match: GLYA_CLOAB (Serine hydroxymethyltransferase OS=Clostridium acetobutylicum GN=glyA PE=3 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 1.044e-57 Identity = 114/228 (50.00%), Postives = 156/228 (68.42%), Query Frame = 3 Query: 12 QWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRK 695 Q +ELI SENFTS +VM+A+GS +TNKY+EGYPG RYYGG +D E L ++RA + F+ + NVQ SGS +N VY A+LKP D IM ++L GGHL+HG ++ F + Y +++ T IDY+ K A +PK+IV+GASAY+R+ D+++IR++C++ A M+ DMAHI+GLVAAG+ PSP YAD VTTTTHK+LRGPRG IF ++ Sbjct: 24 QENNIELIASENFTSKAVMEAMGSYLTNKYAEGYPGKRYYGGCYVVDKVEELARERAKKLFKAEH----ANVQPHSGSQANMAVYFAVLKPGDTIMGMNLTDGGHLTHG-----SPVNFSGKLFNIIAYGVSDETEQIDYEAFRKKALECKPKMIVSGASAYSRIIDFKKIREICDEVGAYMMVDMAHIAGLVAAGLHPSPIPYADFVTTTTHKTLRGPRGGAIFCKE 242
BLAST of EY660088 vs. ExPASy Swiss-Prot
Match: GLYA3_PSEPF (Serine hydroxymethyltransferase 3 OS=Pseudomonas fluorescens (strain Pf0-1) GN=glyA3 PE=3 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 1.044e-57 Identity = 117/229 (51.09%), Postives = 156/229 (68.12%), Query Frame = 3 Query: 24 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVEEI 710 +ELI SEN+TS VMQA GS +TNKY+EGYPG RYYGG E++D E+L +RA + F D NVQ SGS +N VY ALL+ D I+ + L HGGHL+HG K+S+ + + Y ++ TG IDYD++E+ A +PK+IVAG SAY++ D+ R R++ +K A++ DMAH++GLVAAG+ P+P YADVVTTTTHK+LRGPRG +I K EEI Sbjct: 30 IELIASENYTSKRVMQAQGSGLTNKYAEGYPGKRYYGGCEHVDKVEALAIERAKQLFGADY----ANVQPHSGSSANSAVYLALLQAGDTILGMSLAHGGHLTHG-----AKVSSSGKLYNAVQYGIDTKTGLIDYDEVERLAVECKPKMIVAGFSAYSKTLDFPRFRQIADKVGALLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTLRGPRGGLI-LAKANEEI 248
BLAST of EY660088 vs. ExPASy Swiss-Prot
Match: GLYA1_PSEAE (Serine hydroxymethyltransferase 1 OS=Pseudomonas aeruginosa GN=glyA1 PE=3 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 1.044e-57 Identity = 123/255 (48.24%), Postives = 159/255 (62.35%), Query Frame = 3 Query: 24 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVEEITXQGXECFMIMKKK*SSCLSWTPGGP 788 LELI SEN+TS VMQA GS +TNKY+EGYPG RYYGG E++D E L RA + F D NVQ SGS +N VY ALL D I+ + L HGGHL+HG K+S+ + + Y L+ +TG IDYD++E+ A +PK+IVAG SAY++ D+ R R + +K A++ DMAH++GLVAAG+ P+P +ADVVTTTTHK+LRGPRG +I R E I KK S+ GGP Sbjct: 30 LELIASENYTSKRVMQAQGSGLTNKYAEGYPGKRYYGGCEHVDKVERLAIDRARQLFGADY----ANVQPHSGSSANAAVYLALLNAGDTILGMSLAHGGHLTHG-----AKVSSSGKLYNAVQYGLDTATGLIDYDEVERLAVEHKPKMIVAGFSAYSKTLDFPRFRAIADKVGALLFVDMAHVAGLVAAGLYPNPIPFADVVTTTTHKTLRGPRGGLILARANEE-----------IEKKLNSAVFPGAQGGP 264
BLAST of EY660088 vs. ExPASy Swiss-Prot
Match: GLYA1_HAHCH (Serine hydroxymethyltransferase 1 OS=Hahella chejuensis (strain KCTC 2396) GN=glyA1 PE=3 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 1.044e-57 Identity = 117/233 (50.21%), Postives = 153/233 (65.67%), Query Frame = 3 Query: 6 RPQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVE 704 R Q + +ELI SEN+ S VM+A G V+TNKY+EGYPG RYYGG E++D+AE L RA + F D NVQ SGS +N VY AL KP D I+ + L HGGHL+HG K + F + Y LN TG IDYDQ+E+ A +PKL++AG SAY+R+ D++R R + + A ++ DMAH++GLVAAG+ PSP + ADV TTTTHK+LRGPRG +I + E Sbjct: 24 RRQEEHIELIASENYVSPRVMEAQGGVLTNKYAEGYPGKRYYGGCEHVDVAEQLAIDRAKQLFGADY----ANVQPHSGSQANAGVYLALAKPGDTILGMSLDHGGHLTHG-----AKPNFSGKIFNAVQYGLNPETGEIDYDQVERLAKEHKPKLVIAGFSAYSRVVDWQRFRDIADSVGAYLIVDMAHVAGLVAAGLYPSPVQIADVTTTTTHKTLRGPRGGLILAKSNPE 247
BLAST of EY660088 vs. ExPASy Swiss-Prot
Match: GLYA_GEOSL (Serine hydroxymethyltransferase OS=Geobacter sulfurreducens GN=glyA PE=3 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 1.364e-57 Identity = 116/231 (50.22%), Postives = 156/231 (67.53%), Query Frame = 3 Query: 3 TRPQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRK 695 T Q LELI SENF S +V++A GSVMTNKY+EGYPG RYYGG ++D+ E+L +RA E F D NVQ SGS +N VY ++LKP D I+ ++L HGGHL+HG ++ FF +PY +++ T ID++++E+ A +PK+IV GASAY R D+ R + +K A+++ DMAHI+GLVAAG+ PSP YA+ VTTTTHK+LRGPRG MI R+ Sbjct: 19 TERQEYNLELIASENFVSEAVLEAQGSVMTNKYAEGYPGKRYYGGCHHVDVVENLAIERAKELFGADH----ANVQPHSGSQANMAVYFSVLKPGDTILGMNLSHGGHLTHG-----SPVNFSGRFFNVVPYGVSQETETIDFNEVERLALEHKPKMIVVGASAYPRTIDFAAFRIIADKVGAVIMVDMAHIAGLVAAGLHPSPVPYAEFVTTTTHKTLRGPRGGMILCRE 240
BLAST of EY660088 vs. ExPASy Swiss-Prot
Match: GLYA_THEAB (Serine hydroxymethyltransferase OS=Thermosipho africanus (strain TCF52B) GN=glyA PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.782e-57 Identity = 110/221 (49.77%), Postives = 153/221 (69.23%), Query Frame = 3 Query: 21 GLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMI 683 GLELI SENF S++V++A+GSV+TNKY+EGYPG RYYGG E++D+AE L + RA E F + NVQ SGS +N Y A+ +P D IM + L HGGHL+HG ++ + +PY +N T IDYD++ A +PK+IVAG SAY+R+ D+++ R++ ++ A ++ DMAH +GLVAAG+ P+P EYA +VT+TTHK+LRGPRG MI Sbjct: 26 GLELIASENFASLAVIEAMGSVLTNKYAEGYPGRRYYGGCEWVDVAEKLARDRAKELFNVKY----ANVQPHSGSQANMGAYFAVSEPGDTIMGMSLSHGGHLTHG-----ASVNFSGRIYNVVPYGVNPETEVIDYDEVRDLALKHKPKIIVAGGSAYSRIIDFKKFREIADEVGAYLIVDMAHFAGLVAAGIYPNPAEYAHIVTSTTHKTLRGPRGGMI 237
BLAST of EY660088 vs. ExPASy Swiss-Prot
Match: GLYA_CLOBL (Serine hydroxymethyltransferase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=glyA PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.782e-57 Identity = 116/239 (48.54%), Postives = 161/239 (67.36%), Query Frame = 3 Query: 24 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIF----FRKGVEEITXQGXE 728 +ELI SENFTS+SVM+A+GS++TNKY+EGYP RYYGG E++D E L ++R + F + NVQ SGS +N VY ++L+ D I+ +DL HGGHL+HG ++ + + Y +++ T IDYDQL+K A RPK+IV+GASAY R+ D+E+IR++C++ A M+ DMAHI+GLVA G+ PSP YAD VTTTTHK+LRGPRG I + K V++ G + Sbjct: 28 IELIASENFTSLSVMEAMGSLLTNKYAEGYPHKRYYGGCEFVDEVEDLARERLKKLFAAEH----ANVQPHSGSQANMAVYMSVLQTGDTILGMDLSHGGHLTHG-----SPVNFSGKLYNFISYGVDKETETIDYDQLKKIALENRPKMIVSGASAYPRIIDFEKIREICDEIDAYMMVDMAHIAGLVATGLHPSPVPYADFVTTTTHKTLRGPRGGAILCKEKYAKAVDKAIFPGIQ 257
BLAST of EY660088 vs. ExPASy Swiss-Prot
Match: GLYA_CLOBK (Serine hydroxymethyltransferase OS=Clostridium botulinum (strain Okra / Type B1) GN=glyA PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.782e-57 Identity = 116/239 (48.54%), Postives = 161/239 (67.36%), Query Frame = 3 Query: 24 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIF----FRKGVEEITXQGXE 728 +ELI SENFTS+SVM+A+GS++TNKY+EGYP RYYGG E++D E L ++R + F + NVQ SGS +N VY ++L+ D I+ +DL HGGHL+HG ++ + + Y +++ T IDYDQL+K A RPK+IV+GASAY R+ D+E+IR++C++ A M+ DMAHI+GLVA G+ PSP YAD VTTTTHK+LRGPRG I + K V++ G + Sbjct: 28 IELIASENFTSLSVMEAMGSLLTNKYAEGYPHKRYYGGCEFVDEVEDLARERLKKLFVAEH----ANVQPHSGSQANMAVYMSVLQTGDTILGMDLSHGGHLTHG-----SPVNFSGKLYNFISYGVDKETETIDYDQLKKIALENRPKMIVSGASAYPRIIDFEKIREICDEIDAYMMVDMAHIAGLVATGIHPSPVPYADFVTTTTHKTLRGPRGGAILCKEKYAKAVDKAIFPGIQ 257 The following BLAST results are available for this feature:
BLAST of EY660088 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY660088 ID=EY660088; Name=EY660088; organism=Citrus sinensis; type=EST; length=891bpback to top |