EY660087
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660087 vs. ExPASy Swiss-Prot
Match: LBD12_ARATH (LOB domain-containing protein 12 OS=Arabidopsis thaliana GN=LBD12 PE=2 SV=2) HSP 1 Score: 142.51 bits (358), Expect = 3.267e-33 Identity = 67/103 (65.05%), Postives = 82/103 (79.61%), Query Frame = 2 Query: 32 SSSCAACKLLKRKCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMIELQQDLAVARARL 340 SS CA+CKLL+R+C CIFAPYF D+P KFA VHKVFGASNVSK+L E+P QR D VNSL +EA AR+RDPVYGC+GAI+ LQ ++ +LQ LAVA+A + Sbjct: 6 SSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVNSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEI 108
BLAST of EY660087 vs. ExPASy Swiss-Prot
Match: LBD15_ARATH (LOB domain-containing protein 15 OS=Arabidopsis thaliana GN=LBD15 PE=2 SV=2) HSP 1 Score: 137.887 bits (346), Expect = 8.047e-32 Identity = 64/103 (62.14%), Postives = 77/103 (74.76%), Query Frame = 2 Query: 41 CAACKLLKRKCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMIELQQDLAVARARLARY 349 CAACKLL+R+C C F+PYF EP KFA VHKVFGASNVSK+L EVPE QR D NSL YEA RLRDPVYGC+GAI+ LQ+++ LQ +L R+ + +Y Sbjct: 46 CAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKY 148
BLAST of EY660087 vs. ExPASy Swiss-Prot
Match: LBD4_ARATH (LOB domain-containing protein 4 OS=Arabidopsis thaliana GN=LBD4 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.373e-31 Identity = 62/104 (59.62%), Postives = 85/104 (81.73%), Query Frame = 2 Query: 29 SSSSCAACKLLKRKCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMIELQQDLAVARARL 340 ++S CAACKLL+R+C C+F+PYF +DEP+KFA VH+VFGASNV+K+L E+P QR D V+S+ YEA AR+RDPVYGC+GAI+ LQ+++ LQ LA+A+A + Sbjct: 10 AASPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEV 113
BLAST of EY660087 vs. ExPASy Swiss-Prot
Match: LBD13_ARATH (LOB domain-containing protein 13 OS=Arabidopsis thaliana GN=LBD13 PE=2 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 3.381e-30 Identity = 64/116 (55.17%), Postives = 78/116 (67.24%), Query Frame = 2 Query: 41 CAACKLLKRKCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMIELQQDLAVARARLARYTTPAASSCAVLND 388 CAACKLL+R+C C F+PYF EP KFA VHKVFGASNVSK+L EV E QR D NSL YEA RLRDP+YGC+GAI+ LQ + LQ +L R + R+ A++ L + Sbjct: 53 CAACKLLRRRCAEECPFSPYFSPHEPHKFAAVHKVFGASNVSKMLLEVGESQRGDAANSLVYEANLRLRDPIYGCMGAISALQHHIQSLQSELTTVRTEILRHKYQEATTITSLQN 168
BLAST of EY660087 vs. ExPASy Swiss-Prot
Match: LBD3_ARATH (LOB domain-containing protein 3 OS=Arabidopsis thaliana GN=LBD3 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.285e-29 Identity = 63/116 (54.31%), Postives = 82/116 (70.69%), Query Frame = 2 Query: 11 GGHEPRSSSSCAACKLLKRKCIP-TCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMIELQQDLAVARARLARYTT 355 G R+ S CA CKLL+RKC+ +C+FAPYF + EP KFA VHK+FGASNV+K+L E+ E R D V+S+ YEA AR++DPVYGC+G I+ L R++ LQ LA A+A L T Sbjct: 5 GHRHGRTVSPCAGCKLLRRKCVKDSCVFAPYFPAKEPYKFAIVHKIFGASNVNKMLQELSENHRSDAVDSMVYEANARIQDPVYGCVGTISSLHRQLETLQTQLAFAQAELIHIRT 120
BLAST of EY660087 vs. ExPASy Swiss-Prot
Match: LBD1_ARATH (LOB domain-containing protein 1 OS=Arabidopsis thaliana GN=LBD1 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 2.192e-29 Identity = 60/102 (58.82%), Postives = 74/102 (72.55%), Query Frame = 2 Query: 35 SSCAACKLLKRKCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMIELQQDLAVARARL 340 S CAACK+L+R+C C+ APYF +P KF H+VFGASN+ K L E+PE QR D VNS+ YEAEAR+RDPVYGC GAI LQR++ ELQ LA A+ + Sbjct: 32 SPCAACKILRRRCAERCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQRQVSELQAQLAKAQVEM 133
BLAST of EY660087 vs. ExPASy Swiss-Prot
Match: LBD11_ARATH (LOB domain-containing protein 11 OS=Arabidopsis thaliana GN=LBD11 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 2.423e-28 Identity = 59/102 (57.84%), Postives = 72/102 (70.59%), Query Frame = 2 Query: 35 SSCAACKLLKRKCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMIELQQDLAVARARL 340 S CAACK+L+R+C C+ APYF +P KF H+VFGASN+ K L E+PE QR D VNS+ YEA AR+RDPVYGC GAI LQR++ ELQ LA + L Sbjct: 51 SPCAACKILRRRCADKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAGARMRDPVYGCAGAIYHLQRQVSELQAQLAKTQVEL 152
BLAST of EY660087 vs. ExPASy Swiss-Prot
Match: LBD30_ARATH (LOB domain-containing protein 30 OS=Arabidopsis thaliana GN=LBD30 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 4.133e-28 Identity = 64/123 (52.03%), Postives = 82/123 (66.67%), Query Frame = 2 Query: 8 SGGHEPRSSSS-----CAACKLLKRKCIPTCIFAPYFRSDE-PKKFAKVHKVFGASNVSKILTEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMIELQQDLAVARARLARYTTP 358 S P SSS C ACK L+RKC+ CIFAPYF S++ FA VHKVFGASNVSK+L VPE +R D V S+ +EA+ARLRDP+YGC+ I LQ++++ LQ +L+ +A LA P Sbjct: 2 SSSGNPSSSSGGGGGPCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLHHVPEHKRPDAVVSICFEAQARLRDPIYGCVSHIVSLQQQVVSLQTELSYLQAHLATLELP 124
BLAST of EY660087 vs. ExPASy Swiss-Prot
Match: LBD18_ARATH (LOB domain-containing protein 18 OS=Arabidopsis thaliana GN=LBD18 PE=2 SV=2) HSP 1 Score: 122.865 bits (307), Expect = 2.679e-27 Identity = 56/107 (52.34%), Postives = 77/107 (71.96%), Query Frame = 2 Query: 41 CAACKLLKRKCIPTCIFAPYFRSDEPKK-FAKVHKVFGASNVSKILTEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMIELQQDLAVARARLARYTTP 358 C ACK L+RKC+P CIFAPYF S++ FA VHKVFGASNVSK+L +P +R D V ++ YEA+AR+RDP+YGC+ I LQ++++ LQ +++ +A LA P Sbjct: 38 CGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVFGASNVSKLLLHIPVHRRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEVSYLQAHLASLELP 144
BLAST of EY660087 vs. ExPASy Swiss-Prot
Match: LBD20_ARATH (LOB domain-containing protein 20 OS=Arabidopsis thaliana GN=LBD20 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.018e-26 Identity = 56/105 (53.33%), Postives = 79/105 (75.24%), Query Frame = 2 Query: 29 SSSSCAACKLLKRKCIPTCIFAPYFRSDE-PKKFAKVHKVFGASNVSKILTEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMIELQQDLAVARARL 340 ++S C ACK L+RKC+ CIFAP+F SD+ +FA VHKVFGASNVSK+L +P +R D V +++YEA+ARL DPVYGC+ I LQ+++ LQ +L+V +++L Sbjct: 48 TASPCGACKFLRRKCVSGCIFAPHFGSDQGAARFAAVHKVFGASNVSKLLHHIPVNRRHDAVVTISYEAQARLSDPVYGCVSTILALQQQVASLQAELSVVQSQL 152 The following BLAST results are available for this feature:
BLAST of EY660087 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
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Sequences
The
following sequences are available for this feature:
EST sequence >EY660087 ID=EY660087; Name=EY660087; organism=Citrus sinensis; type=EST; length=932bpback to top |