EY705681

Overview
NameEY705681
Unique NameEY705681
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length863
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY705681 vs. ExPASy Swiss-Prot
Match: CB21_SILPR (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene pratensis PE=2 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 2.384e-27
Identity = 73/157 (46.50%), Postives = 91/157 (57.96%), Query Frame = 3
Query:  264 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLHYFGKNIPINLVFA--VIA----EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPWG 710
            WYGPDR  +L        + P YLTGE PGDYG+D  GLS  P+ F+K +  E+IH RWAMLGA G + PE   K G   G EAVWFK G+ +     L Y G     NLV A  ++A    ++VL+G  E YR+  G   E  D+L+PGG FDP G
Sbjct:   48 WYGPDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKFG-EAVWFKAGSQIFQEGGLDYLGNP---NLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDQLYPGGAFDPLG 197          
BLAST of EY705681 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.113e-27
Identity = 69/154 (44.81%), Postives = 88/154 (57.14%), Query Frame = 3
Query:  264 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLHYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPWG 710
            WYGPDR  +L        E P YLTGE PGDYG+D  GLS  P  F+K +  E+IH RW MLGA G + PE F + G   G EAVWFK G+ +     L Y G    +    + A+ A ++VL+G  E YR+  G   ++ D L+PGG FDP G
Sbjct:   50 WYGPDRVKYLGPF---SGEAPSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPELFARNGVKFG-EAVWFKAGSQIFKEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLG 199          
BLAST of EY705681 vs. ExPASy Swiss-Prot
Match: CB23_POLMU (Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.066e-27
Identity = 68/154 (44.16%), Postives = 92/154 (59.74%), Query Frame = 3
Query:  264 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLHYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPWG 710
            WYG DR ++L  G    S  P YL+GE PGDYG+D  GLS  P+ F+K +  E+IH+RWAMLGA G + PE   K G   G EAVWFK G+ +     L Y G    +    + A+ A +++L+G  E YR+  G   ++ED ++PGG FDP G
Sbjct:   49 WYGSDRPLYL--GPFSGSP-PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFG-EAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLG 198          
BLAST of EY705681 vs. ExPASy Swiss-Prot
Match: CB2_CHLRE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 6.935e-27
Identity = 70/155 (45.16%), Postives = 88/155 (56.77%), Query Frame = 3
Query:  261 KWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLHYFGKNIPI---NLVFAVIAEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPWG 710
            ++YGP+R  +L  G    +  P YLTGE PGDYG+D  GLS  P+ F +Y+  ELIHARWAMLGA G   PE   K G   G EAVWFK GA +     L Y G    +   N+V     +++L+G  E YR+  G   E  D L+PG  FDP G
Sbjct:   35 EFYGPNRAKWL--GPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAMLGALGCQTPELLAKSGTKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQNIVATSAVQVILMGLIEGYRVNGGPAGEGLDPLYPGESFDPLG 186          
BLAST of EY705681 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 6.935e-27
Identity = 69/154 (44.81%), Postives = 89/154 (57.79%), Query Frame = 3
Query:  264 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLHYFGKNIPI---NLVFAVIAEIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPWG 710
            WYG DR ++L  G L   E P YLTGE PGDYG+D  GLS  P+ F+K +  E+IH RWAMLGA G + PE   + G   G EA WFK G+ +     L Y G    +   +L+     ++VL+G  E YRI  G   ++ D L+PGG FDP G
Sbjct:   50 WYGSDRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAGWFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWACQVVLMGAVEGYRIAGGPLGEIVDPLYPGGSFDPLG 199          
BLAST of EY705681 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 6.935e-27
Identity = 75/157 (47.77%), Postives = 91/157 (57.96%), Query Frame = 3
Query:  264 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLHYFGKNIPINLVFA--VIA----EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPWG 710
            WYG DR  FL        + P YLTGE PGDYG+D  GLS  P+ F+K +  E+IH+RWAMLGA G I PE  +K G   G EAVWFK GA +     L Y G     NLV A  ++A    ++VL+G  E YR+  G   E  D L+PGG FDP G
Sbjct:   48 WYGADRPKFLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFG-EAVWFKAGAQIFSEGGLDYLGNP---NLVHAQSILAIWATQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLG 197          
BLAST of EY705681 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 9.058e-27
Identity = 68/154 (44.16%), Postives = 88/154 (57.14%), Query Frame = 3
Query:  264 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLHYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPWG 710
            WYGPDR  +L        E P YLTGE PGDYG+D   LS  P+ F+K +  E+IH RWAMLGA G + PE   + G   G EAVWFK G+ +     L Y G    +    + A+ A ++VL+G  E YR+  G   ++ D L+PGG FDP G
Sbjct:   51 WYGPDRVKYLGPF---SGEAPSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLG 200          
BLAST of EY705681 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 9.058e-27
Identity = 68/154 (44.16%), Postives = 88/154 (57.14%), Query Frame = 3
Query:  264 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLHYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPWG 710
            WYGPDR  +L        E P YLTGE PGDYG+D  GLS  P+ F+K +  E+IH RWAMLGA G + PE F + G   G EAVW K G+ +     L Y G    +    + A+ A +++L+G  E YR+  G    + D L+PGG FDP G
Sbjct:   51 WYGPDRVKYLGPF---SGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFG-EAVWLKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVLLMGAVEGYRVAGGPLGVVVDPLYPGGSFDPLG 200          
BLAST of EY705681 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 9.058e-27
Identity = 71/154 (46.10%), Postives = 89/154 (57.79%), Query Frame = 3
Query:  264 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLHYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPWG 710
            WYGPDR  +L        +IP YLTGE PGDYG+D  GLS  P+ F++ +  E+IH+RWAMLGA G   PE   K G   G EAVWFK G+ +     L Y G    I    + A+ A ++VL+G  E YR+  G   E  D L+PGG FDP G
Sbjct:   49 WYGPDRPKYLGPF---SEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFG-EAVWFKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYRVGGGPLGEGLDPLYPGGAFDPLG 198          
BLAST of EY705681 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.183e-26
Identity = 69/154 (44.81%), Postives = 89/154 (57.79%), Query Frame = 3
Query:  264 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLHYFGKN--IPINLVFAV-IAEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPWG 710
            WYG DR  +L        + P YLTGE PGDYG+D  GLS  P+ F++ +  E+IH RWAMLGA G + PE  +K G   G EAVWFK G+ +     L Y G    I    + A+  A++VL+G  E YR+  G   E  DK++PGG FDP G
Sbjct:   49 WYGEDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLG 198          
The following BLAST results are available for this feature:
BLAST of EY705681 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
CB21_SILPR2.384e-2746.50Chlorophyll a-b binding protein, chloroplastic (Fr... [more]
CB21_PETSP3.113e-2744.81Chlorophyll a-b binding protein 13, chloroplastic ... [more]
CB23_POLMU4.066e-2744.16Chlorophyll a-b binding protein type 1 member F3, ... [more]
CB2_CHLRE6.935e-2745.16Chlorophyll a-b binding protein of LHCII type I, c... [more]
CB21_WHEAT6.935e-2744.81Chlorophyll a-b binding protein, chloroplastic OS=... [more]
CB21_LEMGI6.935e-2747.77Chlorophyll a-b binding protein of LHCII type I, c... [more]
CB25_PETSP9.058e-2744.16Chlorophyll a-b binding protein 91R, chloroplastic... [more]
CB22_PETSP9.058e-2744.16Chlorophyll a-b binding protein 22L, chloroplastic... [more]
CB215_PEA9.058e-2746.10Chlorophyll a-b binding protein 215, chloroplastic... [more]
CB26_PETSP1.183e-2644.81Chlorophyll a-b binding protein 37, chloroplastic ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-046-E10-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY705681 ID=EY705681; Name=EY705681; organism=Citrus sinensis; type=EST; length=863bp
CCACGCGTCCGCAAAGAAGCATCAGCAGCAACACTCTGAAGATGGCTTCA
TTGGCAGCATCGTCCACTCCTGCTGCCTCCATTGGAGCTAAGGAGATGCT
TGGCAACCCTCTCAATGTCAGCAGTGCTGTTAGGACTTCAGCTCCAGGTG
CATCAAACCCTTCTACTTTCAAGCCCGTTGCTCTCTTCTCCAAGAAGAAA
GCCGCCCCTCCTGCCAAGTCTAAGCCCGTCGCCGTCTCCCCCGTTAACGA
AGAGCTCGCCAAGTGGTATGGTCCTGACCGAAGAATTTTCTTGCCCGAGG
GTCTCTTGGACAGATCTGAGATCCCTGAGTACTTGACCGGAGAAGTTCCC
GGAGACTATGGTTACGATCCTTTTGGTCTCAGCAAGAAACCAGACGACTT
CAGCAAATATCAGGCATATGAATTGATTCATGCCAGATGGGCCATGCTTG
GTGCTGCTGGTTTCATCATTCCTGAAGCCTTTAACAAGTTTGGTGCTAAC
TGTGGTCCTGAAGCTGTCTGGTTCAAGACTGGAGCTCTACTTCTTGATGG
AAACACATTGCACTACTTCGGAAAGAACATCCCAATCAACCTTGTTTTTG
CTGTCATTGCTGAGATTGTTCTTGTAGGTGGTGCTGAATATTATAGAATC
ACCAACGGTTTGGATTTGGAGGACAAGCTTCACCCAGGTGGTCCATTTGA
CCCCTGGGGATAACAAAGGATCCTGACCATTTGCATTGCTAAAGTGAAGA
AATCAAGAATGAAAGATTGGCATGTTTGCCATGGTTGGTTTCTTCTCAAG
CTTATGTCCAAGGGGAAGTCCAGTTGAAACCTTGCCTAAACTCTCAATGA
TCTTTTTGCAACA
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