EY660065

Overview
NameEY660065
Unique NameEY660065
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660065 vs. ExPASy Swiss-Prot
Match: PHB2_CHICK (Prohibitin-2 OS=Gallus gallus GN=PHB2 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.587e-21
Identity = 79/267 (29.59%), Postives = 124/267 (46.44%), Query Frame = 3
Query:   33 DKVPKMPGG--GANSALIKVAVIGGLGLYAATHTLYNGQGGHKALMFNPIDDVN-DNDYPEVTPLMIPWFEKTVIYDVHALPNLEHSTTGSHDLHMVKIGLTVLTRPEADHLPTIYPTLDQNYDERCLPSIIHETLTTVV*SLQCQPTHHTAL*VGKFARF*L-RRQTISTXXXXXXXXXXXXXXXNVHVPLKLYRLPSKDTQMARSIVERTEHDLIRAIIRALGVCTSAQLIEQA-SAEPSMYTLTKDASATELLHYLQSSTCVLY 818
            D   ++P G  G  +AL K+ +  G   Y    +++  +GG +A+ FN I  V  D    E     IPWF+  +IYD+ A P    S TGS DL MV I L VLTRP A  LP++Y  L  +Y+ER LPSI++E L +VV              V    R  L  R    +                    ++  ++  ++ Q A+ +VE+ + +  + I++A G  T+A+++ +A S  P    L K  +A  +   +  S   +Y
Sbjct:    7 DLAGRLPAGPRGVGTAL-KLLLGAGALAYGVRESVFIVEGGQRAIFFNRIGGVQQDTILAEGLHFRIPWFQYPIIYDIRARPRKISSPTGSKDLQMVNISLRVLTRPNAAELPSMYQRLGLDYEERVLPSIVNEVLKSVVAKFNASQLITQRAQVSLLIRRELTERAKDFSLILDDVAITELSFSREYTAAVEAKQVAQQEAQRAQFLVEKAKQEQKQKIVQAEGEATAAKMLGEALSRNPGYIKLRKIRAAQNISKTIAGSQNRVY 272          
BLAST of EY660065 vs. ExPASy Swiss-Prot
Match: PHB1_DICDI (Prohibitin-1, mitochondrial OS=Dictyostelium discoideum GN=phbA PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.992e-21
Identity = 74/257 (28.79%), Postives = 121/257 (47.08%), Query Frame = 3
Query:   75 LIKVAVIGGLGLYAATHTLYNGQGGHKALMFNPIDDVNDNDYPEVTPLMIPWFEKTVIYDVHALPNLEHSTTGSHDLHMVKIGLTVLTRPEADHLPTIYPTLDQNYDERCLPSIIHETLTTVV*SLQCQPTHHTAL*VGKFARF*L-RRQTISTXXXXXXXXXXXXXXXNVHVPLKLYRLPSKDTQMARSIVERTEHDLIRAIIRALGVCTSAQLIEQASAEPSMY-TLTKDASATELLHYLQSSTCVLYAMISAEL 839
            LI +A+  G GL  A  ++Y   GG +A++F+ I  V +    E T  ++PW +K +I+D+ + P    S TGS DL  V + + VL RP+ +HLP+I+  L  +YDER LPS+ +E L +VV              V K  R  L +R                    +    ++  ++  ++ + ++ IV + E +    IIRA G   +A+LI QA    + +  L +  +  ++   L  S  V Y   S  L
Sbjct:    8 LIPLALTVGTGLSLAQSSMYTVDGGQRAVIFDRISGVKEKSVGEGTHFIMPWLQKPIIFDIRSSPRNIKSDTGSKDLQTVSVTVRVLFRPDVEHLPSIFSKLGLDYDERILPSLGNEVLKSVVAQYDATELITQREVVSKEIRESLMKRAKEFNLLLDDVSITHLSFSQDFTNAIEHKQVAQQEAERSKYIVMKNEQEKKANIIRAEGEAEAAKLIGQAMGNSAAFIELRRIEAYKDITESLSKSKQVTYVPTSGNL 264          
BLAST of EY660065 vs. ExPASy Swiss-Prot
Match: L2CC_DROME (Protein l(2)37Cc OS=Drosophila melanogaster GN=l(2)37Cc PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 3.966e-20
Identity = 71/248 (28.63%), Postives = 116/248 (46.77%), Query Frame = 3
Query:   84 VAVIGGLGLYAATHTLYNGQGGHKALMFNPIDDVNDNDYPEVTPLMIPWFEKTVIYDVHALPNLEHSTTGSHDLHMVKIGLTVLTRPEADHLPTIYPTLDQNYDERCLPSIIHETLTTVV*SLQC-QPTHHTAL*VGKFARF*LRRQTISTXXXXXXXXXXXXXXXNVHVPLKLYRLPSKDTQMARSIVERTEHDLIRAIIRALGVCTSAQLIEQASAE--PSMYTLTKDASATELLHYLQSSTCVLY 818
            VAV+GG+        LYN +GGH+A++F+    + +N   E T   IPW ++ +I+D+ + P      TGS DL  V I L +L RP  D LP IY  L Q+YDER LPSI  E L  VV      +      +   + ++    R                       + +++ ++  ++ + AR +VE+ E   + +II A G   +A L+ ++  E    +  L +  +A ++ + L  S  V Y
Sbjct:   16 VAVLGGV----VNSALYNVEGGHRAVIFDRFTGIKENVVGEGTHFFIPWVQRPIIFDIRSQPRNVPVITGSKDLQNVNITLRILYRPIPDQLPKIYTILGQDYDERVLPSIAPEVLKAVVAQFDAGELITQREMVSQRVSQELTVRAKQFGFILDDISLTHLTFGREFTLAVEMKQVAQQEAEKARFVVEKAEQQKLASIISAEGDAEAAGLLAKSFGEAGDGLVELRRIEAAEDIAYQLSRSRGVAY 259          
BLAST of EY660065 vs. ExPASy Swiss-Prot
Match: PHB1_SCHPO (Prohibitin-1 OS=Schizosaccharomyces pombe GN=phb1 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.836e-20
Identity = 64/217 (29.49%), Postives = 105/217 (48.39%), Query Frame = 3
Query:   81 KVAVIGGLGLYAATHTLYNGQGGHKALMFNPIDDVNDNDYPEVTPLMIPWFEKTVIYDVHALPNLEHSTTGSHDLHMVKIGLTVLTRPEADHLPTIYPTLDQNYDERCLPSIIHETLTTVV*SLQ-CQPTHHTAL*VGKFARF*LRRQTISTXXXXXXXXXXXXXXXNVHVPLKLYRLPSKDTQMARSIVERTEHDLIRAIIRALGVCTSAQLIEQA 728
            + A+  G+G      ++Y+  GG +A++F+ +  V      E T  +IPW +K ++YDV   P    +TTGS DL MV + L VL RPE   LP IY  L  +YDER LPSI +E L +VV      +      +   K  +  ++R T                       ++  ++  ++ + AR +VE++E +    +IRA G   +A ++ +A
Sbjct:   10 RYAIPIGIGFTLLQSSIYDVPGGKRAVLFDRLSGVQKQVVQEGTHFLIPWLQKAIVYDVRTRPRNIATTTGSKDLQMVSLTLRVLHRPEVGMLPQIYQNLGLDYDERVLPSIGNEILKSVVAQFDAAELITQREVVSAKIRQELVQRATEFGIRLEDVSITHMTFGKEFTKAVERKQIAQQEAERARFLVEQSEQERQANVIRAEGEAEAADIVSKA 226          
BLAST of EY660065 vs. ExPASy Swiss-Prot
Match: PHB1_YEAST (Prohibitin-1 OS=Saccharomyces cerevisiae GN=PHB1 PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.154e-19
Identity = 69/256 (26.95%), Postives = 124/256 (48.44%), Query Frame = 3
Query:   75 LIKVAVIGGLGLYAATHTLYNGQGGHKALMFNPIDDVNDNDYPEVTPLMIPWFEKTVIYDVHALPNLEHSTTGSHDLHMVKIGLTVLTRPEADHLPTIYPTLDQNYDERCLPSIIHETLTTVV*SLQCQPTHHTAL*VGKFARF*LRRQTISTXXXXXXXXXXXXXXXNVHV------PLKLYRLPSKDTQMARSIVERTEHDLIRAIIRALGVCTSAQLIEQASAE--PSMYTLTKDASATELLHYLQSSTCVLY 818
            + KVA+  G+      +++Y+ +GG + ++F+ I+ V      E T  ++PW +K +IYDV   P    + TG+ DL MV + L VL RPE   LP IY  L  +YDER LPSI +E L ++V              + +       R+ +ST               ++         ++  ++  +D + A+ +VE+ E +   ++IRA G   SA+ I +A A+    +  + +  ++ ++   L +S+ V+Y
Sbjct:   11 ITKVALPIGIIASGIQYSMYDVKGGSRGVIFDRINGVKQQVVGEGTHFLVPWLQKAIIYDVRTKPKSIATNTGTKDLQMVSLTLRVLHRPEVLQLPAIYQNLGLDYDERVLPSIGNEVLKSIVAQFDAAELITQREIISQKI-----RKELSTRANEFGIKLEDVSITHMTFGPEFTKAVEQKQIAQQDAERAKFLVEKAEQERQASVIRAEGEAESAEFISKALAKVGDGLLLIRRLEASKDIAQTLANSSNVVY 261          
BLAST of EY660065 vs. ExPASy Swiss-Prot
Match: PHB1_CAEEL (Mitochondrial prohibitin complex protein 1 OS=Caenorhabditis elegans GN=phb-1 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.507e-19
Identity = 71/250 (28.40%), Postives = 114/250 (45.60%), Query Frame = 3
Query:   78 IKVAVIGGLGLYAATHTLYNGQGGHKALMFNPIDDVNDNDYPEVTPLMIPWFEKTVIYDVHALPNLEHSTTGSHDLHMVKIGLTVLTRPEADHLPTIYPTLDQNYDERCLPSIIHETLTTVV*SLQCQPTHHTAL*VGKFARF*LRRQTISTXXXXXXXXXXXXXXXNVHV-PLKLYRLPSKDTQMARSIVERTEHDLIRAIIRALGVCTSAQLIEQ--ASAEPSMYTLTKDASATELLHYLQSSTCVLY 818
            + +++ GG+    A   LYN  GG +A++F+    V +    E T  +IPW +K +I+D+ + P    + TGS DL  V I L +L RP  D LP IY  +  +Y ER LPSI +E L  VV              V + A   LR +                         +++ ++  ++ + AR +VE+ E   I A+  A G   +A+L+ +  ASA   +  L K  +A E+   +  +  V Y
Sbjct:   17 VGLSIAGGI----AQTALYNVDGGQRAVIFDRFSGVKNEVVGEGTHFLIPWVQKPIIFDIRSTPRAVTTITGSKDLQNVNITLRILHRPSPDRLPNIYLNIGLDYAERVLPSITNEVLKAVVAQFDAHEMITQREVVSQRASVALRERAAQFGLLLDDIAITHLNFGREFTEAVEMKQVAQQEAEKARYLVEKAEQMKIAAVTTAEGDAQAAKLLAKAFASAGDGLVELRKIEAAEEIAERMAKNKNVTY 262          
BLAST of EY660065 vs. ExPASy Swiss-Prot
Match: PHB_RAT (Prohibitin OS=Rattus norvegicus GN=Phb PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.842e-18
Identity = 73/250 (29.20%), Postives = 112/250 (44.80%), Query Frame = 3
Query:   78 IKVAVIGGLGLYAATHTLYNGQGGHKALMFNPIDDVNDNDYPEVTPLMIPWFEKTVIYDVHALPNLEHSTTGSHDLHMVKIGLTVLTRPEADHLPTIYPTLDQNYDERCLPSIIHETLTTVV*SLQCQPTHHTAL*VGKFARF*LRRQTISTXXXXXXXXXXXXXXXNVHV-PLKLYRLPSKDTQMARSIVERTEHDLIRAIIRALGVCTSAQLIEQ--ASAEPSMYTLTKDASATELLHYLQSSTCVLY 818
            + +AV GG+        LYN   GH+A++F+    V D    E T  +IPW +K +I+D  + P      TGS DL  V I L +L RP A  LP IY ++ ++YDER LPSI  E L +VV              V +     L  +  +                      ++  ++  ++ + AR +VE+ E     AII A G   +A+LI    A+A   +  L K  +A ++ + L  S  + Y
Sbjct:   14 LALAVAGGV----VNSALYNVDAGHRAVIFDRFRGVQDIVVGEGTHFLIPWVQKPIIFDCRSRPRNVPVITGSKDLQNVNITLRILFRPVASQLPRIYTSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSDDLTERAATFGLILDDVSLTHLTFGKEFTEAVEAKQVAQQEAERARFVVEKAEQQKKAAIISAEGDSKAAELIANSLATAGDGLIELRKLEAAEDIAYQLSRSRNITY 259          
BLAST of EY660065 vs. ExPASy Swiss-Prot
Match: PHB_MOUSE (Prohibitin OS=Mus musculus GN=Phb PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.842e-18
Identity = 73/250 (29.20%), Postives = 112/250 (44.80%), Query Frame = 3
Query:   78 IKVAVIGGLGLYAATHTLYNGQGGHKALMFNPIDDVNDNDYPEVTPLMIPWFEKTVIYDVHALPNLEHSTTGSHDLHMVKIGLTVLTRPEADHLPTIYPTLDQNYDERCLPSIIHETLTTVV*SLQCQPTHHTAL*VGKFARF*LRRQTISTXXXXXXXXXXXXXXXNVHV-PLKLYRLPSKDTQMARSIVERTEHDLIRAIIRALGVCTSAQLIEQ--ASAEPSMYTLTKDASATELLHYLQSSTCVLY 818
            + +AV GG+        LYN   GH+A++F+    V D    E T  +IPW +K +I+D  + P      TGS DL  V I L +L RP A  LP IY ++ ++YDER LPSI  E L +VV              V +     L  +  +                      ++  ++  ++ + AR +VE+ E     AII A G   +A+LI    A+A   +  L K  +A ++ + L  S  + Y
Sbjct:   14 LALAVAGGV----VNSALYNVDAGHRAVIFDRFRGVQDIVVGEGTHFLIPWVQKPIIFDCRSRPRNVPVITGSKDLQNVNITLRILFRPVASQLPRIYTSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSDDLTERAATFGLILDDVSLTHLTFGKEFTEAVEAKQVAQQEAERARFVVEKAEQQKKAAIISAEGDSKAAELIANSLATAGDGLIELRKLEAAEDIAYQLSRSRNITY 259          
BLAST of EY660065 vs. ExPASy Swiss-Prot
Match: PHB_HUMAN (Prohibitin OS=Homo sapiens GN=PHB PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.270e-18
Identity = 72/250 (28.80%), Postives = 112/250 (44.80%), Query Frame = 3
Query:   78 IKVAVIGGLGLYAATHTLYNGQGGHKALMFNPIDDVNDNDYPEVTPLMIPWFEKTVIYDVHALPNLEHSTTGSHDLHMVKIGLTVLTRPEADHLPTIYPTLDQNYDERCLPSIIHETLTTVV*SLQCQPTHHTAL*VGKFARF*LRRQTISTXXXXXXXXXXXXXXXNVHV-PLKLYRLPSKDTQMARSIVERTEHDLIRAIIRALGVCTSAQLIEQ--ASAEPSMYTLTKDASATELLHYLQSSTCVLY 818
            + +AV GG+        LYN   GH+A++F+    V D    E T  +IPW +K +I+D  + P      TGS DL  V I L +L RP A  LP I+ ++ ++YDER LPSI  E L +VV              V +     L  +  +                      ++  ++  ++ + AR +VE+ E     AII A G   +A+LI    A+A   +  L K  +A ++ + L  S  + Y
Sbjct:   14 LALAVAGGV----VNSALYNVDAGHRAVIFDRFRGVQDIVVGEGTHFLIPWVQKPIIFDCRSRPRNVPVITGSKDLQNVNITLRILFRPVASQLPRIFTSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSDDLTERAATFGLILDDVSLTHLTFGKEFTEAVEAKQVAQQEAERARFVVEKAEQQKKAAIISAEGDSKAAELIANSLATAGDGLIELRKLEAAEDIAYQLSRSRNITY 259          
BLAST of EY660065 vs. ExPASy Swiss-Prot
Match: PHB_CHICK (Prohibitin OS=Gallus gallus GN=PHB PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.270e-18
Identity = 72/247 (29.15%), Postives = 110/247 (44.53%), Query Frame = 3
Query:   99 GLGLYAA----THTLYNGQGGHKALMFNPIDDVNDNDYPEVTPLMIPWFEKTVIYDVHALPNLEHSTTGSHDLHMVKIGLTVLTRPEADHLPTIYPTLDQNYDERCLPSIIHETLTTVV*SLQC-QPTHHTAL*VGKFARF*LRRQTISTXXXXXXXXXXXXXXXNVHVPLKLYRLPSKDTQMARSIVERTEHDLIRAIIRALGVCTSAQLIEQ--ASAEPSMYTLTKDASATELLHYLQSSTCVLY 818
            GLGL  A       LYN   GH+A++F+    V D    E T  +IPW +K +I+D  + P      TGS DL  V I L +L RP    LP I+ ++ ++YDER LPSI  E L +VV      +      L   + +     R                         +++ ++  ++ + AR IVE+ E     A+I A G   +A+LI    A+A   +  L K  +A ++ + L  S  + Y
Sbjct:   13 GLGLAVAGGVVNSALYNVDAGHRAVIFDRFRGVQDTVVGEGTHFLIPWVQKPIIFDCRSRPRNIPVITGSKDLQNVNITLRILFRPVTAQLPRIFTSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSEDLTERAATFGLILDDVSLTHLTFGKEFTEAVEMKQVAQQEAERARFIVEKAEQQKKAAVISAEGDSKAAELIANSLATAGDGLIELRKLEAAEDIAYQLSRSRNITY 259          
The following BLAST results are available for this feature:
BLAST of EY660065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
PHB2_CHICK3.587e-2129.59Prohibitin-2 OS=Gallus gallus GN=PHB2 PE=2 SV=1[more]
PHB1_DICDI7.992e-2128.79Prohibitin-1, mitochondrial OS=Dictyostelium disco... [more]
L2CC_DROME3.966e-2028.63Protein l(2)37Cc OS=Drosophila melanogaster GN=l(2... [more]
PHB1_SCHPO8.836e-2029.49Prohibitin-1 OS=Schizosaccharomyces pombe GN=phb1 ... [more]
PHB1_YEAST1.154e-1926.95Prohibitin-1 OS=Saccharomyces cerevisiae GN=PHB1 P... [more]
PHB1_CAEEL1.507e-1928.40Mitochondrial prohibitin complex protein 1 OS=Caen... [more]
PHB_RAT2.842e-1829.20Prohibitin OS=Rattus norvegicus GN=Phb PE=1 SV=1[more]
PHB_MOUSE2.842e-1829.20Prohibitin OS=Mus musculus GN=Phb PE=1 SV=1[more]
PHB_HUMAN8.270e-1828.80Prohibitin OS=Homo sapiens GN=PHB PE=1 SV=1[more]
PHB_CHICK8.270e-1829.15Prohibitin OS=Gallus gallus GN=PHB PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-018-B06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660065 ID=EY660065; Name=EY660065; organism=Citrus sinensis; type=EST; length=903bp
CCACGCGTCCGGGAAAAATGTACTTCAACAATGACAAAGTTCCCAAGATG
CCGGGCGGTGGCGCAAACTCTGCTCTAATTAAGGTGGCGGTTATTGGCGG
GCTTGGTTTGTACGCTGCTACTCATACTCTCTACAATGGCCAGGGAGGAC
ATAAGGCCCTTATGTTCAACCCCATAGATGATGTCAATGATAATGATTAT
CCCGAAGTGACACCTCTTATGATTCCATGGTTTGAGAAGACTGTCATCTA
TGATGTTCATGCTCTACCCAACTTAGAGCATAGTACTACTGGTAGCCATG
ATCTTCATATGGTTAAGATTGGGCTTACGGTGCTCACTCGACCTGAGGCT
GACCACTTGCCTACAATTTATCCAACCCTTGATCAGAACTACGATGAAAG
GTGTCTGCCTTCTATCATTCATGAAACTTTAACAACTGTGGTATGATCTC
TACAATGCCAGCCAACTCATCACACAGCACTGTAAGTAGGGAAATTCGCA
AGATTCTGACTGAGAAGGCAGACTATTTCAACATTGCTCTCGATGATGTC
TCCATTACTAGCCTTACTGTTGGCCATGAATGTACATGTGCCATTGAAGC
TATACAGGCTCCCGTCAAAAGATACACAGATGGCTAGATCTATTGTGGAG
AGAACCGAGCACGACTTGATACGTGCTATCATTAGAGCACTCGGAGTATG
CACTAGTGCTCAGCTGATTGAGCAGGCATCTGCAGAACCCAGCATGTATA
CACTGACGAAGGATGCATCAGCTACAGAATTGCTCCACTATCTCCAGTCA
TCAACATGTGTACTCTATGCAATGATCTCTGCTGAACTTCAGGAATTGAG
TGGGTCACAGCCATGAAACATCCATTCTTTNNCTTGGTGGATACTACTTG
AGC
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