EY660058

Overview
NameEY660058
Unique NameEY660058
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length765
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660058 vs. ExPASy Swiss-Prot
Match: PLAS_VICFA (Plastocyanin OS=Vicia faba GN=PETE PE=1 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 9.165e-41
Identity = 79/99 (79.80%), Postives = 85/99 (85.86%), Query Frame = 1
Query:  265 IEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNFVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 561
            +EVLLG  DG LAFVP+SF VS+G+ IVFKNNAGFPHN VFDEDEIPSGVD +KISM  EDLLN PGETY+V L  KGTY FYCSPHQGAGMVGQVTVN
Sbjct:    1 VEVLLGASDGGLAFVPNSFEVSAGDTIVFKNNAGFPHNVVFDEDEIPSGVDAAKISMPEEDLLNAPGETYSVKLDAKGTYKFYCSPHQGAGMVGQVTVN 99          
BLAST of EY660058 vs. ExPASy Swiss-Prot
Match: PLAS_FRIAG (Plastocyanin, chloroplastic OS=Fritillaria agrestis GN=PETE PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.197e-40
Identity = 85/154 (55.19%), Postives = 102/154 (66.23%), Query Frame = 1
Query:  103 GLKAGATPARVVGSTMKASASAVPKLSIKATLKD-VGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNFVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 561
            GLKAG  P     S    +  +    S+KA+ K+ +G                  +EVLLGG DGSLAFVPS+  V++GE +VFKNNAGFPHN +FDEDE+P GVD   ISM  EDLLN PGET++VTL EKGTYS YCSPHQGAGM G++TVN
Sbjct:   16 GLKAGRAPTTPSTSIKPPTPMS---FSVKASFKEAIGTALVATAAGAVLASNALAVEVLLGGSDGSLAFVPSNIEVAAGETVVFKNNAGFPHNVLFDEDEVPKGVDAGAISMKEEDLLNAPGETFSVTLKEKGTYSIYCSPHQGAGMAGKITVN 166          
BLAST of EY660058 vs. ExPASy Swiss-Prot
Match: PLAS_GINBI (Plastocyanin OS=Ginkgo biloba GN=PETE PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.797e-36
Identity = 68/99 (68.69%), Postives = 81/99 (81.82%), Query Frame = 1
Query:  265 IEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNFVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 561
            +EVL+GG  G LAF+P+   V++GE+IVFKNNAGFPHN +FDED +P+GVDVS ISMS EDLLN PGETY V L +KGTY F+C+PHQG GM G VTVN
Sbjct:    1 VEVLMGGSGGELAFIPNELQVNAGEQIVFKNNAGFPHNVIFDEDAVPAGVDVSSISMSEEDLLNAPGETYVVKLDKKGTYRFFCAPHQGIGMSGIVTVN 99          
BLAST of EY660058 vs. ExPASy Swiss-Prot
Match: PLAS_PETCR (Plastocyanin A/B OS=Petroselinum crispum GN=PETE PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 9.814e-35
Identity = 70/98 (71.43%), Postives = 78/98 (79.59%), Query Frame = 1
Query:  268 EVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNFVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 561
            EV LG DDG L F PSSF+V++GEKI FKNNAGFPHN VFDEDE+P+GV+  KIS    + LNG GETY VTLTEKGTY FYC PH GAGM G+VTVN
Sbjct:    2 EVKLGSDDGGLVFSPSSFTVAAGEKITFKNNAGFPHNIVFDEDEVPAGVNAEKISQ--PEYLNGAGETYEVTLTEKGTYKFYCEPHAGAGMKGEVTVN 97          
BLAST of EY660058 vs. ExPASy Swiss-Prot
Match: PLAS_DAUCA (Plastocyanin OS=Daucus carota GN=PETE PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.282e-34
Identity = 71/97 (73.20%), Postives = 79/97 (81.44%), Query Frame = 1
Query:  268 EVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNFVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTV 558
            EV LG DDG+L F PSSFSV+ GE I FKNNAGFPHN VFDEDE+P+GVDVSKIS   ED L+G GE++ VTLTEKGTY FYC PH GAGM G+VTV
Sbjct:    2 EVKLGADDGALVFSPSSFSVAKGEGISFKNNAGFPHNIVFDEDEVPAGVDVSKISQ--EDYLDGAGESFTVTLTEKGTYKFYCEPHAGAGMKGEVTV 96          
BLAST of EY660058 vs. ExPASy Swiss-Prot
Match: PLAS_ORYSJ (Plastocyanin, chloroplastic OS=Oryza sativa subsp. japonica GN=PETE PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.417e-33
Identity = 69/98 (70.41%), Postives = 77/98 (78.57%), Query Frame = 1
Query:  268 EVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNFVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 561
            EVLLG + G L F P+ F+V SGE I FKNNAGFPHN VFDED +PSGVDVSKIS   E+ LN PGET++VTLT  GTY FYC PH GAGMVG+VTVN
Sbjct:   59 EVLLGANGGVLVFEPNDFTVKSGETITFKNNAGFPHNVVFDEDAVPSGVDVSKISQ--EEYLNAPGETFSVTLTVPGTYGFYCEPHAGAGMVGKVTVN 154          
BLAST of EY660058 vs. ExPASy Swiss-Prot
Match: PLAS_ORYSI (Plastocyanin, chloroplastic OS=Oryza sativa subsp. indica GN=PETE PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.417e-33
Identity = 69/98 (70.41%), Postives = 77/98 (78.57%), Query Frame = 1
Query:  268 EVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNFVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 561
            EVLLG + G L F P+ F+V SGE I FKNNAGFPHN VFDED +PSGVDVSKIS   E+ LN PGET++VTLT  GTY FYC PH GAGMVG+VTVN
Sbjct:   59 EVLLGANGGVLVFEPNDFTVKSGETITFKNNAGFPHNVVFDEDAVPSGVDVSKISQ--EEYLNAPGETFSVTLTVPGTYGFYCEPHAGAGMVGKVTVN 154          
BLAST of EY660058 vs. ExPASy Swiss-Prot
Match: PLAS_HORVU (Plastocyanin, chloroplastic OS=Hordeum vulgare GN=PETE PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.954e-32
Identity = 66/98 (67.35%), Postives = 76/98 (77.55%), Query Frame = 1
Query:  268 EVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNFVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 561
            +VLLG + G L F P+ FSV +GE I FKNNAG+PHN VFDED +PSGVDVSKIS   E+ L  PGET++VTLT  GTY FYC PH GAGMVG+VTVN
Sbjct:   60 DVLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQ--EEYLTAPGETFSVTLTVPGTYGFYCEPHAGAGMVGKVTVN 155          
BLAST of EY660058 vs. ExPASy Swiss-Prot
Match: PLAS_PHYPA (Plastocyanin, chloroplastic OS=Physcomitrella patens GN=PETE PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.718e-29
Identity = 69/155 (44.52%), Postives = 87/155 (56.13%), Query Frame = 1
Query:  103 GLKAG--ATPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNFVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 561
            GLKA   A PAR+  +++   A  V   +    LK VG                    V +GGDDG+L F P   SV++GE + F NN GFPHN VFDED +P+GV    I  + ED LNGP E++++T    GTY FYC PHQGAGM G VTV+
Sbjct:   16 GLKAETKAAPARLSSTSVVRMAPVVRASASSDALKTVGKALLAASSSLLLVASANAATVKMGGDDGALGFYPKDISVAAGESVTFVNNKGFPHNVVFDEDAVPAGVKTEDI--NHEDYLNGPNESFSITFKTPGTYEFYCEPHQGAGMKGVVTVS 168          
BLAST of EY660058 vs. ExPASy Swiss-Prot
Match: PLAS_CHLRE (Plastocyanin, chloroplastic OS=Chlamydomonas reinhardtii GN=PETE PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.162e-27
Identity = 58/96 (60.42%), Postives = 69/96 (71.88%), Query Frame = 1
Query:  271 VLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNFVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTV 558
            V LG D G+L FVP + ++ SGE + F NNAGFPHN VFDED IPSGV+   I  S +D LN PGETY+V LT  G Y +YC PHQGAGMVG++ V
Sbjct:   51 VKLGADSGALEFVPKTLTIKSGETVNFVNNAGFPHNIVFDEDAIPSGVNADAI--SRDDYLNAPGETYSVKLTAAGEYGYYCEPHQGAGMVGKIIV 144          
The following BLAST results are available for this feature:
BLAST of EY660058 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
PLAS_VICFA9.165e-4179.80Plastocyanin OS=Vicia faba GN=PETE PE=1 SV=1[more]
PLAS_FRIAG1.197e-4055.19Plastocyanin, chloroplastic OS=Fritillaria agresti... [more]
PLAS_GINBI6.797e-3668.69Plastocyanin OS=Ginkgo biloba GN=PETE PE=1 SV=1[more]
PLAS_PETCR9.814e-3571.43Plastocyanin A/B OS=Petroselinum crispum GN=PETE P... [more]
PLAS_DAUCA1.282e-3473.20Plastocyanin OS=Daucus carota GN=PETE PE=1 SV=1[more]
PLAS_ORYSJ2.417e-3370.41Plastocyanin, chloroplastic OS=Oryza sativa subsp.... [more]
PLAS_ORYSI2.417e-3370.41Plastocyanin, chloroplastic OS=Oryza sativa subsp.... [more]
PLAS_HORVU5.954e-3267.35Plastocyanin, chloroplastic OS=Hordeum vulgare GN=... [more]
PLAS_PHYPA4.718e-2944.52Plastocyanin, chloroplastic OS=Physcomitrella pate... [more]
PLAS_CHLRE1.162e-2760.42Plastocyanin, chloroplastic OS=Chlamydomonas reinh... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-018-A11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660058 ID=EY660058; Name=EY660058; organism=Citrus sinensis; type=EST; length=765bp
TTCCTCGACCCACGCGTCCGCAAAAAGAATTACACCAGAACCCCATTTAC
AGTTACAATGGCTACTGTCACCTCTGCAGCTGTCACCGTCCCAACTTTCA
CCGGCCTTAAAGCCGGTGCAACACCAGCCAGAGTTGTTGGTTCCACCATG
AAGGCCTCAGCCTCTGCTGTCCCAAAGCTCAGCATCAAGGCCACACTCAA
AGATGTTGGAGTGGCCGTTGCGGCCACAGCTGCCAGCGCAATGCTTGCTA
GCAATGCCATGGCCATTGAGGTTTTGCTTGGTGGTGATGATGGGTCCTTG
GCTTTTGTTCCAAGCTCTTTCTCTGTCAGCTCCGGTGAAAAGATTGTGTT
CAAGAACAATGCTGGGTTCCCACACAACTTTGTTTTCGATGAAGATGAGA
TTCCGAGTGGTGTTGATGTTTCAAAAATCTCCATGTCTACAGAAGACCTT
CTCAATGGTCCTGGAGAGACTTATGCTGTTACTCTGACTGAAAAAGGCAC
TTACTCTTTCTACTGTTCCCCTCACCAAGGAGCTGGCATGGTTGGACAAG
TGACTGTTAATTAAGTTCACATTCAGACTTTGTTTGCCTCATCTCATTGG
TTATCGTTCTCTTCTTTTTGCATTTTATGAGTATCATACATATTTTCATT
TGGTGAGAGAGAATGTTATGTGGTGAGACACTTCAACCAAGCCAATAAAC
CTCTGTATTTTCCATTTATTTCAAATGCAGAATTGTGATGTAACTAATTA
AAAAAAAAAAAAAAA
back to top