EY660058

Overview
NameEY660058
Unique NameEY660058
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length765
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660058 vs. ExPASy Swiss-Prot
Match: PLAS_ENTPR (Plastocyanin OS=Enteromorpha prolifera GN=PETE PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 6.376e-26
Identity = 58/96 (60.42%), Postives = 66/96 (68.75%), Query Frame = 1
Query:  271 VLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNFVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTV 558
            V LGGDDGSLAFVP++ +V +GE I F NNAGFPHN VFDED +P+GVD   I  S ED LN  G+T    LT  GTY  YC PH GAGM   +TV
Sbjct:    4 VKLGGDDGSLAFVPNNITVGAGESIEFINNAGFPHNIVFDEDAVPAGVDADAI--SAEDYLNSKGQTVVRKLTTPGTYGVYCDPHSGAGMKMTITV 97          
BLAST of EY660058 vs. ExPASy Swiss-Prot
Match: PLAS_CHLFU (Plastocyanin OS=Chlorella fusca GN=petE PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.088e-25
Identity = 52/98 (53.06%), Postives = 68/98 (69.39%), Query Frame = 1
Query:  265 IEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNFVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTV 558
            + V LG D G+L F PSS ++ +GE + + NNAGFPHN VFDEDE+PSG +    ++S ED LN PGE+Y+      GTY ++C PHQGAGM G +TV
Sbjct:    2 VTVKLGADSGALVFEPSSVTIKAGETVTWVNNAGFPHNIVFDEDEVPSGANAE--ALSHEDYLNAPGESYSAKFDTAGTYGYFCEPHQGAGMKGTITV 97          
BLAST of EY660058 vs. ExPASy Swiss-Prot
Match: PLAS_ULVPE (Plastocyanin OS=Ulva pertusa GN=PETE PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.423e-25
Identity = 58/96 (60.42%), Postives = 65/96 (67.71%), Query Frame = 1
Query:  271 VLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNFVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTV 558
            V LGGDDGSLAFVPS  SV++GE I F NNAGFPHN VFDED +P+GVD   IS   +D LN  GET    L+  G Y  YC PH GAGM   +TV
Sbjct:    4 VKLGGDDGSLAFVPSKISVAAGEAIEFVNNAGFPHNIVFDEDAVPAGVDADAISY--DDYLNSKGETVVRKLSTPGVYGVYCEPHAGAGMKMTITV 97          
BLAST of EY660058 vs. ExPASy Swiss-Prot
Match: PLAS_ULVAR (Plastocyanin OS=Ulva arasakii GN=PETE PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.398e-25
Identity = 57/96 (59.38%), Postives = 65/96 (67.71%), Query Frame = 1
Query:  271 VLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNFVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTV 558
            V LGGDDG+LAFVPS  SV++GE I F NNAGFPHN VFDED +P+GVD   IS   +D LN  GET    L+  G Y  YC PH GAGM   +TV
Sbjct:    4 VKLGGDDGALAFVPSKISVAAGEAIEFVNNAGFPHNIVFDEDAVPAGVDADAISY--DDYLNSKGETVVRKLSTPGVYGVYCEPHAGAGMKMTITV 97          
BLAST of EY660058 vs. ExPASy Swiss-Prot
Match: PLAS_SCEOB (Plastocyanin, chloroplastic OS=Scenedesmus obliquus GN=PETE PE=1 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 5.398e-25
Identity = 59/150 (39.33%), Postives = 82/150 (54.67%), Query Frame = 1
Query:  109 KAGATPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNFVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTV 558
            KA   PA+   +T+KASAS          L+ V                     V LG D G+L F P++ ++ +G+ + + NNAGFPHN VFDED +P+GV+    ++S +D LN PGE+Y       G Y ++C PHQGAGMVG+V V
Sbjct:    7 KAAVAPAKATRTTVKASAS----------LQRVAQAAGVAVAGFSLALSANAANVKLGADSGALVFEPATVTIKAGDSVTWTNNAGFPHNIVFDEDAVPAGVNAD--ALSHDDYLNAPGESYTAKFDTAGEYGYFCEPHQGAGMVGKVIV 144          
BLAST of EY660058 vs. ExPASy Swiss-Prot
Match: PLAS_CYAP7 (Plastocyanin OS=Cyanothece sp. (strain PCC 7424) GN=petE PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.894e-18
Identity = 42/96 (43.75%), Postives = 59/96 (61.46%), Query Frame = 1
Query:  271 VLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNFVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTV 558
            V +G D G L F P   ++ +G+ + + NN   PHN VFD  ++P  V  +KIS     L+  PGE++  T  E GTY++YC PH+GAGMVG +TV
Sbjct:   33 VKMGSDQGLLKFDPPQLTIKAGDTVKWVNNKLAPHNAVFDNSKVPDSVSATKISHKA--LVFSPGESFTTTFDEPGTYTYYCEPHRGAGMVGTITV 126          
BLAST of EY660058 vs. ExPASy Swiss-Prot
Match: PLAS_SYNY3 (Plastocyanin OS=Synechocystis sp. (strain PCC 6803) GN=petE PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.507e-16
Identity = 43/97 (44.33%), Postives = 61/97 (62.89%), Query Frame = 1
Query:  271 VLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNFVFDEDEIPSGVDVSKIS-MSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTV 558
            V +G D G+L F PS+ ++ +GE++ + NN   PHN VF  D    GVD    + +S + L    GE++  T TE GTY++YC PH+GAGMVG+V V
Sbjct:   33 VKMGSDSGALVFEPSTVTIKAGEEVKWVNNKLSPHNIVFAAD----GVDADTAAKLSHKGLAFAAGESFTSTFTEPGTYTYYCEPHRGAGMVGKVVV 125          
BLAST of EY660058 vs. ExPASy Swiss-Prot
Match: PLAS_PHOLA (Plastocyanin OS=Phormidium laminosum GN=petE PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.580e-16
Identity = 39/99 (39.39%), Postives = 61/99 (61.62%), Query Frame = 1
Query:  271 VLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNFVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTE---KGTYSFYCSPHQGAGMVGQVTV 558
            V +G D G L F P++ +V  G+ + + NN   PHN +FD+ ++P         +S   L+  PGE+Y +T +     GTY++YC+PH+GAGMVG++TV
Sbjct:   39 VKMGADSGLLQFEPANVTVHPGDTVKWVNNKLPPHNILFDDKQVPGASKELADKLSHSQLMFSPGESYEITFSSDFPAGTYTYYCAPHRGAGMVGKITV 137          
BLAST of EY660058 vs. ExPASy Swiss-Prot
Match: PLAS_SYNP6 (Plastocyanin OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=petE PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.740e-15
Identity = 38/98 (38.78%), Postives = 59/98 (60.20%), Query Frame = 1
Query:  265 IEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNFVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTV 558
            + + +G D+G LAF PS+  + +G+ + + NN   PHN V +           +  +S +DL   PGET+  T +E GTY++YC PH+GAGMVG++ V
Sbjct:   37 VAIKMGADNGMLAFEPSTIEIQAGDTVQWVNNKLAPHNVVVE----------GQPELSHKDLAFSPGETFEATFSEPGTYTYYCEPHRGAGMVGKIVV 124          
BLAST of EY660058 vs. ExPASy Swiss-Prot
Match: PLAS_SYNE7 (Plastocyanin OS=Synechococcus elongatus (strain PCC 7942) GN=petE PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.740e-15
Identity = 38/98 (38.78%), Postives = 59/98 (60.20%), Query Frame = 1
Query:  265 IEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNFVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTV 558
            + + +G D+G LAF PS+  + +G+ + + NN   PHN V +           +  +S +DL   PGET+  T +E GTY++YC PH+GAGMVG++ V
Sbjct:   37 VAIKMGADNGMLAFEPSTIEIQAGDTVQWVNNKLAPHNVVVE----------GQPELSHKDLAFSPGETFEATFSEPGTYTYYCEPHRGAGMVGKIVV 124          
The following BLAST results are available for this feature:
BLAST of EY660058 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
PLAS_ENTPR6.376e-2660.42Plastocyanin OS=Enteromorpha prolifera GN=PETE PE=... [more]
PLAS_CHLFU1.088e-2553.06Plastocyanin OS=Chlorella fusca GN=petE PE=1 SV=1[more]
PLAS_ULVPE2.423e-2560.42Plastocyanin OS=Ulva pertusa GN=PETE PE=1 SV=1[more]
PLAS_ULVAR5.398e-2559.38Plastocyanin OS=Ulva arasakii GN=PETE PE=1 SV=1[more]
PLAS_SCEOB5.398e-2539.33Plastocyanin, chloroplastic OS=Scenedesmus obliquu... [more]
PLAS_CYAP74.894e-1843.75Plastocyanin OS=Cyanothece sp. (strain PCC 7424) G... [more]
PLAS_SYNY33.507e-1644.33Plastocyanin OS=Synechocystis sp. (strain PCC 6803... [more]
PLAS_PHOLA4.580e-1639.39Plastocyanin OS=Phormidium laminosum GN=petE PE=1 ... [more]
PLAS_SYNP61.740e-1538.78Plastocyanin OS=Synechococcus sp. (strain ATCC 271... [more]
PLAS_SYNE71.740e-1538.78Plastocyanin OS=Synechococcus elongatus (strain PC... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-018-A11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660058 ID=EY660058; Name=EY660058; organism=Citrus sinensis; type=EST; length=765bp
TTCCTCGACCCACGCGTCCGCAAAAAGAATTACACCAGAACCCCATTTAC
AGTTACAATGGCTACTGTCACCTCTGCAGCTGTCACCGTCCCAACTTTCA
CCGGCCTTAAAGCCGGTGCAACACCAGCCAGAGTTGTTGGTTCCACCATG
AAGGCCTCAGCCTCTGCTGTCCCAAAGCTCAGCATCAAGGCCACACTCAA
AGATGTTGGAGTGGCCGTTGCGGCCACAGCTGCCAGCGCAATGCTTGCTA
GCAATGCCATGGCCATTGAGGTTTTGCTTGGTGGTGATGATGGGTCCTTG
GCTTTTGTTCCAAGCTCTTTCTCTGTCAGCTCCGGTGAAAAGATTGTGTT
CAAGAACAATGCTGGGTTCCCACACAACTTTGTTTTCGATGAAGATGAGA
TTCCGAGTGGTGTTGATGTTTCAAAAATCTCCATGTCTACAGAAGACCTT
CTCAATGGTCCTGGAGAGACTTATGCTGTTACTCTGACTGAAAAAGGCAC
TTACTCTTTCTACTGTTCCCCTCACCAAGGAGCTGGCATGGTTGGACAAG
TGACTGTTAATTAAGTTCACATTCAGACTTTGTTTGCCTCATCTCATTGG
TTATCGTTCTCTTCTTTTTGCATTTTATGAGTATCATACATATTTTCATT
TGGTGAGAGAGAATGTTATGTGGTGAGACACTTCAACCAAGCCAATAAAC
CTCTGTATTTTCCATTTATTTCAAATGCAGAATTGTGATGTAACTAATTA
AAAAAAAAAAAAAAA
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