EY660040

Overview
NameEY660040
Unique NameEY660040
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660040 vs. ExPASy Swiss-Prot
Match: PR4_PRUPE (Pathogenesis-related protein PR-4 (Fragment) OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.504e-44
Identity = 77/103 (74.76%), Postives = 87/103 (84.47%), Query Frame = 1
Query:  328 WDLNAVSAYCSTWDANKPLSWRRKYGWTAFCGPVGPRGQASCGKCLRVTNRATRAQATVRIVDQCSNGGLDLDAGVFRQLDTDGRGNAQGHLMVDYQFVNCGD 636
            WDL   S +C+TWDA+KPLSWR KYGWTAFCGPVGP GQ SCGKCL VTN  T A+ TVRIVDQCSNGGLDLD  VF Q+DT+G+GNAQGHL+V+Y FV+CGD
Sbjct:    5 WDLRTASVFCATWDADKPLSWRSKYGWTAFCGPVGPTGQDSCGKCLLVTNTGTGAKVTVRIVDQCSNGGLDLDVNVFNQIDTNGQGNAQGHLIVNYDFVDCGD 107          
BLAST of EY660040 vs. ExPASy Swiss-Prot
Match: WIN_SOYBN (Wound-induced protein (Fragment) OS=Glycine max GN=WIN PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 4.587e-36
Identity = 67/87 (77.01%), Postives = 74/87 (85.06%), Query Frame = 1
Query:  376 KPLSWRRKYGWTAFCGPVGPRGQASCGKCLRVTNRATRAQATVRIVDQCSNGGLDLDAGVFRQLDTDGRGNAQGHLMVDYQFVNCGD 636
            KP SWR KYGWTAFCGPVGPRG+ SCGKCLRVTN  T A   VRIVDQCSNGGLDLD GVF ++DTDGRG  QGHL+V+YQFV+CG+
Sbjct:    1 KPYSWRSKYGWTAFCGPVGPRGRDSCGKCLRVTNTGTGANTIVRIVDQCSNGGLDLDVGVFNRIDTDGRGYQQGHLIVNYQFVDCGN 87          
BLAST of EY660040 vs. ExPASy Swiss-Prot
Match: CHAL_BRARA (Chitin-binding allergen Bra r 2 (Fragments) OS=Brassica rapa PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.276e-35
Identity = 73/125 (58.40%), Postives = 79/125 (63.20%), Query Frame = 1
Query:  133 QAGGRTCANNLCCSQYGYCGSTDEYCSPSKNCQSNCRPXXXXXXXXXXXXNVRATYHFYNPEQNGWDLNAVSAYCSTWDANKPLSWRRKYGWTAFCGPVGPRGQASCGKCLRVTNRATRAQATVR 507
            QAGG+TCA N+CCSQYGYCG+T +YCSP  NCQ                    ATYH+YNP QN WDL AVSAYCSTWDA+KP SWR  YGWTAFCGP GPR       CLR     T A  TVR
Sbjct:    1 QAGGQTCAGNICCSQYGYCGTTADYCSPDNNCQ--------------------ATYHYYNPAQNNWDLRAVSAYCSTWDADKPYSWR--YGWTAFCGPAGPR-------CLR-----TNAAVTVR 91          
BLAST of EY660040 vs. ExPASy Swiss-Prot
Match: HEVP_HEVBR (Pseudo-hevein OS=Hevea brasiliensis PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.812e-16
Identity = 33/40 (82.50%), Postives = 38/40 (95.00%), Query Frame = 1
Query:  124 CGRQAGGRTCANNLCCSQYGYCGSTDEYCSPSKNCQSNCR 243
            CGRQAGG+ C NNLCCSQYG+CGS+D+YCSPSKNCQSNC+
Sbjct:    3 CGRQAGGKLCPNNLCCSQYGWCGSSDDYCSPSKNCQSNCK 42          
BLAST of EY660040 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.755e-11
Identity = 26/52 (50.00%), Postives = 34/52 (65.38%), Query Frame = 1
Query:   85 LLICSMTIAAAHPCGRQAGGRTCANNLCCSQYGYCGSTDEYCSPSKNCQSNC 240
            L +  + + +A  CGRQAGG  C   LCCSQ+G+CG+TD+YC     CQS C
Sbjct:   11 LFLSYLILGSAEQCGRQAGGALCPGGLCCSQFGWCGNTDDYCKKENGCQSQC 62          
BLAST of EY660040 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.670e-11
Identity = 31/57 (54.39%), Postives = 40/57 (70.18%), Query Frame = 1
Query:   70 SLCMVLLICSMTIAAAHPCGRQAGGRTCANNLCCSQYGYCGSTDEYCSPSKNCQSNC 240
            SL   LL+ S   A+A  CG QAGG  CA+ LCCS++G+CG+T++YC P  NCQS C
Sbjct:   11 SLLFSLLLLS---ASAEQCGSQAGGARCASGLCCSKFGWCGNTNDYCGPG-NCQSQC 63          
BLAST of EY660040 vs. ExPASy Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.711e-11
Identity = 27/44 (61.36%), Postives = 34/44 (77.27%), Query Frame = 1
Query:  109 AAAHPCGRQAGGRTCANNLCCSQYGYCGSTDEYCSPSKNCQSNC 240
            A+A  CG QAGG  CA+ LCCS++G+CG+T+EYC P  NCQS C
Sbjct:   20 ASAEQCGSQAGGALCASGLCCSKFGWCGNTNEYCGPG-NCQSQC 62          
The following BLAST results are available for this feature:
BLAST of EY660040 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
PR4_PRUPE3.504e-4474.76Pathogenesis-related protein PR-4 (Fragment) OS=Pr... [more]
WIN_SOYBN4.587e-3677.01Wound-induced protein (Fragment) OS=Glycine max GN... [more]
CHAL_BRARA2.276e-3558.40Chitin-binding allergen Bra r 2 (Fragments) OS=Bra... [more]
HEVP_HEVBR1.812e-1682.50Pseudo-hevein OS=Hevea brasiliensis PE=1 SV=1[more]
CHI1_THECC1.755e-1150.00Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 S... [more]
CHI2_TOBAC6.670e-1154.39Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1... [more]
CHIC_SOLLC8.711e-1161.36Basic 30 kDa endochitinase OS=Solanum lycopersicum... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-017-H05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660040 ID=EY660040; Name=EY660040; organism=Citrus sinensis; type=EST; length=834bp
ACTGGACGCCTGCGGTACCGGTCCGGATTCCTTCAAAACACCCCGCGTCC
GATTAAAAATTGTCCAAAAAGCTTGTGCATGGTGTTGCTAATTTGTTCAA
TGACTATCGCCGCTGCACACCCATGCGGCCGGCAAGCCGGTGGCCGGACT
TGTGCCAACAACCTATGTTGCAGCCAGTATGGTTATTGTGGCTCAACTGA
TGAGTATTGCTCGCCTTCTAAGAATTGTCAAAGTAATTGTAGGCCCGGCA
GCAGCAGCAGCGGTGGTGGCGAAAGTGCTTCTAATGTTAGAGCAACTTAT
CACTTTTACAATCCTGAACAGAATGGATGGGACTTGAATGCTGTGAGTGC
TTACTGCTCAACATGGGATGCAAACAAGCCCTTGTCTTGGCGTAGGAAAT
ATGGATGGACTGCCTTCTGTGGACCCGTTGGGCCTCGTGGACAAGCTTCT
TGTGGCAAGTGCTTAAGGGTGACTAACAGAGCCACAAGAGCTCAAGCAAC
TGTGAGAATTGTTGATCAGTGCAGCAATGGAGGTTTAGATTTGGACGCTG
GTGTTTTCCGGCAGCTGGATACTGACGGAAGAGGCAATGCTCAAGGTCAC
CTCATGGTGGACTACCAGTTCGTTAACTGTGGAGATTGAATCTTATTAAA
TTATGATATGAATAAAATAAATAGACATTATAANTTATACAATTGATGAA
ATGTTTATTGAATAAGAAATGTGATTAATAAATTAATTTAGAACGTGAAA
AGTATGANGTGATAATGACTCTGTTCATGTTGGGATCTCATTGAAATAAA
TAAATTACAGATCCTTTAATTAAAAAAAAAAAAA
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