EY660036

Overview
NameEY660036
Unique NameEY660036
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY660036_ssr245 microsatellite EY660036_ssr245:245..256. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY660036 vs. ExPASy Swiss-Prot
Match: XTH25_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis thaliana GN=XTH25 PE=2 SV=2)

HSP 1 Score: 192.586 bits (488), Expect = 2.521e-48
Identity = 95/201 (47.26%), Postives = 129/201 (64.18%), Query Frame = 2
Query:  191 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRXYKNSGRAPFQ*TNPWGCIRRCGKQMTGHQKWSR-----EIDWSKLLFML-LRDFDIEAC 775
            TF  +F +TW D   + +  G  + L LD+ SG GF +K++YLFG++ M++KLVPG+SAGTVTA+Y+ S  +   DE+DFEFLGN TG PYT+ TN+Y  GKGDREQ+ +LWFDP AD+H Y++LWN HHIVF VDD+P+R +KN      Q   P     R    +    +W+      + DWSK  F    R+F  +AC
Sbjct:   29 TFDTEFDITWGDGRGKVLNNGELLTLSLDRASGSGFQTKKEYLFGKIDMQLKLVPGNSAGTVTAYYLKSKGDTW-DEIDFEFLGNLTGDPYTMHTNVYTQGKGDREQQFHLWFDPTADFHTYSVLWNPHHIVFMVDDIPVREFKNLQHMGIQ--YPKLQPMRLYSSLWNADQWATRGGLVKTDWSKAPFTASYRNFRADAC 226          
BLAST of EY660036 vs. ExPASy Swiss-Prot
Match: XTH_WHEAT (Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum GN=XTH PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.293e-48
Identity = 99/200 (49.50%), Postives = 127/200 (63.50%), Query Frame = 2
Query:  194 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRXYKNSG----RAPFQ*TNPWGCIRRCGKQMTGHQKWSRE-IDWSKLLFML-LRDFDIEAC 775
            F +++  TW+  H+  + GGR +QL LD+ +G GF ++  YLFG  SM IKLV GDSAGTVTAFY++S      DE+DFEFLGNRTGQPY +QTN+++ GKGDREQR+ LWFDP  DYH Y++LWN + I F+VDD PIR +KNS     R PF    P               +  RE  DWSK  F+   R F ++ C
Sbjct:   32 FDKNYVPTWAQDHIHYVNGGREVQLSLDKTTGTGFQTRGSYLFGHFSMHIKLVGGDSAGTVTAFYLSSQNSE-HDEIDFEFLGNRTGQPYILQTNVFSGGKGDREQRIYLWFDPTKDYHSYSVLWNLYMIAFFVDDTPIRVFKNSKDLGVRYPFD--QPMKLYSSLWNADDWATRGGREKTDWSKAPFVASYRGFHVDGC 228          
BLAST of EY660036 vs. ExPASy Swiss-Prot
Match: XTH8_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 8 OS=Arabidopsis thaliana GN=XTH8 PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 9.581e-48
Identity = 97/203 (47.78%), Postives = 124/203 (61.08%), Query Frame = 2
Query:  191 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTEN--VRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRXYKNSGRAPFQ*TNPWGCIRRCGKQMTGHQKWS-----REIDWSKLLFM-LLRDFDIEAC 775
            +F ++F + WS+ H    + G    L LD ++GCGF +K  Y FG  SMK+KLV GDSAG VTA+YM S       RDE+DFEFLGNRTGQPY +QTN+Y NG G+RE R +LWFDP  DYH Y+ILWN+H +VF+VD VPIR YKNS + P     P          +     W+      + DW K  F+   +DF +E C
Sbjct:   24 SFEDNFNIMWSENHFTTSDDGEIWNLSLDNDTGCGFQTKHMYRFGWFSMKLKLVGGDSAGVVTAYYMCSENGAGPERDEIDFEFLGNRTGQPYIIQTNVYKNGTGNREMRHSLWFDPTKDYHTYSILWNNHQLVFFVDRVPIRVYKNSDKVPNNDFFPNQKPMYLFSSIWNADDWATRGGLEKTDWKKAPFVSSYKDFAVEGC 226          
BLAST of EY660036 vs. ExPASy Swiss-Prot
Match: XTH_SOYBN (Probable xyloglucan endotransglucosylase/hydrolase (Fragment) OS=Glycine max GN=XTH PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.251e-47
Identity = 98/200 (49.00%), Postives = 128/200 (64.00%), Query Frame = 2
Query:  194 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRXYKNSGRAPFQ*TNPWGCIRRCGKQMTGHQKWS-----REIDWSKLLFM-LLRDFDIEAC 775
            F  ++  TW+  H++   GG  IQL LD+ +G GF SK  YLFG  SM IK+VPGDSAGTVTAFY++S      DE+DFEFLGNRTGQPY +QTN++  GKGDREQR+ LWFDP  +YH Y+ILWN + IVF+VD+VPIR +KNS     +   P+    +    +     W+      + DWSK  F+   + F I+ C
Sbjct:   33 FGRNYVPTWAFDHIKYFNGGSDIQLHLDKYTGTGFQSKGSYLFGHFSMYIKMVPGDSAGTVTAFYLSSQNAE-HDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEYHRYSILWNLYQIVFFVDEVPIRVFKNSKDLGVK--FPFDQPMKIYNSLWNADDWATRGGLEKTDWSKAPFIAAYKGFHIDGC 229          
BLAST of EY660036 vs. ExPASy Swiss-Prot
Match: XTH13_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 13 OS=Arabidopsis thaliana GN=XTH13 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 1.407e-47
Identity = 77/146 (52.74%), Postives = 108/146 (73.97%), Query Frame = 2
Query:  191 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRXYKNS 628
            +F ++F +TW +     +E G+ +   LD+ SG GF SK++YLFG++ MK+KLV G+SAGTVTA+Y++S  E   DE+DFEFLGN TGQPY + TN++  GKG+RE +  LWFDP AD+H YT+LWN  +I+F VD +PIR +KN+
Sbjct:   25 SFYDNFDITWGNGRANIVESGQLLTCTLDKISGSGFQSKKEYLFGKIDMKMKLVAGNSAGTVTAYYLSSKGETW-DEIDFEFLGNVTGQPYVLHTNVFTGGKGNREMQFYLWFDPTADFHTYTVLWNPLNIIFLVDGIPIRVFKNN 169          

HSP 2 Score: 34.6538 bits (78), Expect = 1.407e-47
Identity = 12/19 (63.16%), Postives = 16/19 (84.21%), Query Frame = 1
Query:  649 NQPMGVYPTLWEADDWAPE 705
            +QPM +Y +LWEADDWA +
Sbjct:  179 SQPMKIYSSLWEADDWATQ 197          
BLAST of EY660036 vs. ExPASy Swiss-Prot
Match: XTH21_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 21 OS=Arabidopsis thaliana GN=XTH21 PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.058e-47
Identity = 82/144 (56.94%), Postives = 101/144 (70.14%), Query Frame = 2
Query:  194 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRXYKN 625
            F +D  +TW D     +  G  + L LDQ+SG GF SK +YL+G+V M+IKLVPG+SAGTVT FY+ S      DE+DFEFLGN +G PY V TN+Y  GKGDREQ+  LWFDP A +H Y+ILWN  HIVFY+D  PIR +KN
Sbjct:   28 FNQDIDITWGDGRGNILNNGTLLNLGLDQSSGSGFQSKAEYLYGKVDMQIKLVPGNSAGTVTTFYLKSQGLTW-DEIDFEFLGNVSGDPYIVHTNVYTQGKGDREQQFYLWFDPTAAFHNYSILWNPSHIVFYIDGKPIREFKN 170          

HSP 2 Score: 33.8834 bits (76), Expect = 4.058e-47
Identity = 16/34 (47.06%), Postives = 20/34 (58.82%), Query Frame = 1
Query:  649 NQPMGVYPTLWEADDWAPE-VV*RNRLEQAPFYA 747
            NQPM +Y +LW ADDWA    + +    Q PF A
Sbjct:  181 NQPMRMYGSLWNADDWATRGGLVKTNWSQGPFVA 214          
BLAST of EY660036 vs. ExPASy Swiss-Prot
Match: XTH10_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 10 OS=Arabidopsis thaliana GN=XTH10 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 4.025e-46
Identity = 100/223 (44.84%), Postives = 134/223 (60.09%), Query Frame = 2
Query:  194 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRXYKNSGR--APFQ*TNPWGCIRRCGKQMTGHQKWSR-----EIDWSKLLFML-LRDFDIEACPVLNHKL---GLNPSNWGEAN 829
            F +DF VTWS  H+     GR+  L LDQ SG  F+S + +LFG++ MKIKL+ G S GTV A+YM+S+  N RDE+DFEFLGN  GQPY +QTN+YA G  +RE+R++LWFDPA D+H Y+ILWN H IVF VD +PIR Y+N G     +    P          +   + W+      +IDWSK  F+    D+ I+AC  + +     G +  NW   N
Sbjct:   37 FNKDFFVTWSPTHVNTSNDGRSRTLKLDQESGASFSSIQTFLFGQIDMKIKLIRGSSQGTVVAYYMSSDQPN-RDEIDFEFLGNVNGQPYILQTNVYAEGLDNREERIHLWFDPAKDFHTYSILWNIHQIVFMVDQIPIRLYRNHGEKGVAYPRLQPMS----VQASLWNGESWATRGGHDKIDWSKGPFVASFGDYKIDACIWIGNTSFCNGESTENWWNKN 254          
BLAST of EY660036 vs. ExPASy Swiss-Prot
Match: XTHB_PHAAN (Probable xyloglucan endotransglucosylase/hydrolase protein B OS=Phaseolus angularis GN=XTHB PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 7.591e-45
Identity = 92/200 (46.00%), Postives = 124/200 (62.00%), Query Frame = 2
Query:  194 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRXYKNSGRAPFQ*TNPWGCIRRCGKQMTGHQKWS-----REIDWSKLLFML-LRDFDIEAC 775
            F  ++  TW+  H++   GG  IQL LD+ +G GF +K  YLFG  SM IK+VPGDSAGTVTAF ++S      DE+DFEFLGNRTGQPY +QTN++  GKGDREQR+ LWFDP   YH Y++LWN + IVF VD++PIR +KN      +   P+    +    +     W+      + DWSK  F+   + F ++ C
Sbjct:   32 FGRNYIPTWAFDHIKYFNGGSEIQLHLDKYTGTGFQTKGSYLFGHFSMNIKMVPGDSAGTVTAFCLSSQNAE-HDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKAYHRYSVLWNMYQIVFLVDNIPIRVFKNLKELGVK--FPFNQPMKVYNSLWNADDWATRGGLEKTDWSKAPFVAEYKGFHVDGC 228          
BLAST of EY660036 vs. ExPASy Swiss-Prot
Match: XTH15_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 15 OS=Arabidopsis thaliana GN=XTH15 PE=1 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 7.591e-45
Identity = 91/204 (44.61%), Postives = 127/204 (62.25%), Query Frame = 2
Query:  188 ATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRXYKNSGR--APFQ*TNPWGCIRRCGKQMTGHQKWSR-----EIDWSKLLF-MLLRDFDIEAC 775
            + F ++F +TW D   +   GG  + L LDQ SG GF SK++YLFGR+ M++KLV G+SAGTVTA+Y++S      DE+DFEFLGN TG+PY + TN++A GKGDREQ+  LWFDP  ++H Y+I+W   HI+F VD++PIR + N+ +   PF  + P     R    +     W+      + DWSK  F    R F+  AC
Sbjct:   26 SNFFDEFDLTWGDHRGKIFNGGNMLSLSLDQVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSQGAT-HDEIDFEFLGNETGKPYVLHTNVFAQGKGDREQQFYLWFDPTKNFHTYSIVWRPQHIIFLVDNLPIRVFNNAEKLGVPFPKSQP----MRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRGFNAAAC 224          
BLAST of EY660036 vs. ExPASy Swiss-Prot
Match: XTH23_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 23 OS=Arabidopsis thaliana GN=XTH23 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 4.920e-44
Identity = 95/208 (45.67%), Postives = 126/208 (60.58%), Query Frame = 2
Query:  188 ATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRXYKN--SGRAPFQ*TNPWGCIRRCGKQMTGHQKWSR-----EIDWSKLLFML-LRDFDIEACPVLN 787
            A F  D ++TW D   +    G  + L LD+ SG GF SK +YLFG++ M+IKLV G+SAGTVTA+Y+ S   +  DE+DFEFLGN +G PYT+ TN++  GKGDREQ+  LWFDP +D+H Y+ILWN   I+F VD  PIR +KN  S    F    P     R    +   ++W+      + DWSK  F    R F+ EAC V+N
Sbjct:   24 ANFQRDVEITWGDGRGQITNNGDLLTLSLDKASGSGFQSKNEYLFGKIDMQIKLVAGNSAGTVTAYYLKS-PGSTWDEIDFEFLGNLSGDPYTLHTNVFTQGKGDREQQFKLWFDPTSDFHTYSILWNPQRIIFSVDGTPIREFKNMESQGTLFPKNQP----MRMYSSLWNAEEWATRGGLVKTDWSKAPFTASYRGFNEEACVVIN 226          
The following BLAST results are available for this feature:
BLAST of EY660036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
XTH25_ARATH2.521e-4847.26Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_WHEAT3.293e-4849.50Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH8_ARATH9.581e-4847.78Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_SOYBN1.251e-4749.00Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH13_ARATH1.407e-4752.74Putative xyloglucan endotransglucosylase/hydrolase... [more]
XTH21_ARATH4.058e-4756.94Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH10_ARATH4.025e-4644.84Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTHB_PHAAN7.591e-4546.00Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH15_ARATH7.591e-4544.61Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH23_ARATH4.920e-4445.67Probable xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-017-H01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660036 ID=EY660036; Name=EY660036; organism=Citrus sinensis; type=EST; length=877bp
TTCTCAACCCACGCGTCCGCTCGGCATATTTACCACAACATATAATTAAA
GTTCTCTTTCTAATTAGTAACAGATAATATTTTATTGTACGGCTTGTTTT
ACAGCTATGGCTATCCTAAGAAATGCAATAGCATTATTTGTGTTGCTTTA
CTGTCTTGTATCCTGCTCTTGCGTTTTAGGGCGACCGGCTACTTTTCTTG
AGGATTTTAAAGTCACATGGTCCGATGCCCATCTCAGGCAAATCGAGGGA
GGGAGGGCCATCCAGCTAGTTCTAGACCAAAATTCAGGATGTGGGTTTGC
TTCCAAAAGGCAGTACTTGTTCGGGCGTGTAAGCATGAAGATCAAGCTCG
TTCCTGGAGACTCTGCTGGAACTGTCACTGCATTTTATATGAATTCCAAC
ACCGAAAATGTGAGAGACGAGCTTGATTTTGAGTTCCTGGGAAACCGAAC
GGGTCAGCCTTACACGGTCCAGACCAATATCTATGCAAATGGAAAAGGCG
ATAGAGAACAGAGAGTGAACCTCTGGTTTGACCCTGCTGCAGATTATCAC
CTTTACACTATTCTCTGGAACCATCACCATATTGTCTTCTATGTGGATGA
TGTGCCCATCAGGNNTTACAAAAACAGTGGAAGGGCTCCATTTCAATGAA
CCAACCCATGGGGGTGTATCCGACGCTGTGGGAAGCAGATGACTGGGCAC
CAGAAGTGGTCTAGAGAAATAGATTGGAGCAAGCTCCTTTTTATGCTATT
ACGAGACTTTGATATTGAGGCCTGCCCAGTCCTGAACCACAAACTGGGCC
TCAACCCAAGTAACTGGGGGGAAGCAAATAATATCCAACCCTCCCGCCAT
GGAAGCAAAAAAACAAATGGGTCGCCT
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