EY660032

Overview
NameEY660032
Unique NameEY660032
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length904
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660032 vs. ExPASy Swiss-Prot
Match: SGT2_YEAST (Small glutamine-rich tetratricopeptide repeat-containing protein 2 OS=Saccharomyces cerevisiae GN=SGT2 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.607e-21
Identity = 60/151 (39.74%), Postives = 93/151 (61.59%), Query Frame = 2
Query:  170 ETENSSVSRAEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDAAQKVKECEKAVKKLKFEEAI----AVPESERHSVADS 610
            E +  + ++AE+LK   N+A   K Y  AI+ Y++AI++   NA+YYANRA AH+ L+EY  A++DA  AI IDP Y +GY R G A  A GK +EAL+ +++V  +  ++   A K ++ E A KK+  E+++     VPE  R +  D+
Sbjct:   93 EDDAETKAKAEDLKMQGNKAMANKDYELAINKYTEAIKVLPTNAIYYANRAAAHSSLKEYDQAVKDAESAISIDPSYFRGYSRLGFAKYAQGKPEEALEAYKKVLDIEGDNATEAMK-RDYESAKKKV--EQSLNLEKTVPEQSRDADVDA 240          
BLAST of EY660032 vs. ExPASy Swiss-Prot
Match: RPAP3_CHICK (RNA polymerase II-associated protein 3 OS=Gallus gallus GN=RPAP3 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.283e-18
Identity = 60/192 (31.25%), Postives = 105/192 (54.69%), Query Frame = 2
Query:  176 ENSSVSRAEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDAAQKVKEC--EKAVKKLKFEE---AIAVPESERHSVA----DSIDYRSIEVEPQYSGARIEGDVITLDFVK--KMMDDFKN 718
            E     +A   K L N  F+  KY  AI+ Y++ I  +  NA+  ANRA A+ K+++Y  A  D ++A+ +D  Y K + RRGAA +A+GK KEA++DF+ V KL P +  A  ++ +   E A K+    E   A+ + ESE  ++     + ++ +S +   + +   ++ DV+  DF     +++++KN
Sbjct:  276 EEQLKQKAVTEKDLGNGYFKEGKYEAAIECYTRGIAADGTNALLPANRAMAYLKIQKYEEAENDCTQALLLDASYSKAFARRGAARVALGKLKEAMQDFEAVLKLEPGNKQAINELTKIRNELAEKEQSCHEEYPAVLIKESEIKNIVKLTHNPLNLKSTKPLRRIAVEEVDDDVLNSDFSSSTSLVNNWKN 467          

HSP 2 Score: 78.5666 bits (192), Expect = 5.577e-14
Identity = 51/177 (28.81%), Postives = 97/177 (54.80%), Query Frame = 2
Query:  113 LVANIEPDLSKTIKVMPNMETENSSVSRAEELKALA-----NEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDAAQKVKECEKAV-----KKLKFEEAI--AVPESERHSVAD 607
            ++  ++ D S    V P  ++E   +   +E KALA     N+ F+   + +AI  Y++ +  +  N V   NRA A  +++++  A  D + A+ +D  Y K Y RRGAA  A+  F+ A +D+++V +L  N+ +A  ++K+ E+A+     ++ +FEEA+   + E+ER  + +
Sbjct:  101 ILEELDKDDSTHDSVSPESDSEEDGIHIDKE-KALAEKEKGNKYFKQGNFDEAIKCYTRGMHSDPFNPVLPTNRASAFYRMKKFSVAESDCNLALALDKNYTKAYARRGAARFALKNFQGAKEDYEKVLELDANNYEAKNELKKIEQALSSESSEQKEFEEAVRSELTENERRCIEE 276          
BLAST of EY660032 vs. ExPASy Swiss-Prot
Match: SGTA_BOVIN (Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Bos taurus GN=SGTA PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.188e-18
Identity = 50/142 (35.21%), Postives = 77/142 (54.23%), Query Frame = 2
Query:  125 IEPDLSKTIKVMPNMETENSSVSRAEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDAAQKVKECEKAVKK 550
            + PDL    +  P+ E      + AE LK   NE  + + +  A+  Y +AIELN  NAVY+ NRA A++KL  Y  A+QD  +AI IDP Y K Y R G A  ++ K  EA+  +++  +L P++      +K  E  +++
Sbjct:   71 LPPDLRSPQETPPSEEDS----AEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPSYSKAYGRMGLALSSLNKHTEAVAYYRKALELDPDNETYKSNLKVAELRLRE 208          
BLAST of EY660032 vs. ExPASy Swiss-Prot
Match: RPAP3_XENTR (RNA polymerase II-associated protein 3 OS=Xenopus tropicalis GN=rpap3 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.875e-18
Identity = 54/128 (42.19%), Postives = 73/128 (57.03%), Query Frame = 2
Query:  209 KALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDAAQKVKECEKAVKKLKFEEAIAVPESER 592
            K L N  F+  KY  AID YSQ +E ++ NA+  ANRA A+ K+++Y  A  D + AI +D  Y K + RRG A + +GK KEA +DF+ V KL   DP   Q V E EK  ++L+  E       ER
Sbjct:  288 KDLGNAYFKEGKYEIAIDCYSQGMEADTTNALLPANRAMAYLKIQKYKEAETDCTLAISLDASYCKAFARRGTARIMLGKQKEAKEDFEMVLKL---DPGNKQAVLELEKISRELRSNEKDTKGNKER 412          

HSP 2 Score: 77.0258 bits (188), Expect = 1.623e-13
Identity = 47/159 (29.56%), Postives = 90/159 (56.60%), Query Frame = 2
Query:  209 KALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDAAQKV----KECEKAVKKLKFEEAIAVPESERHSVADSIDYRSIEVEPQYSGARIEGDV 673
            K   N  F++ +Y +AI+ Y++ ++ +  NAV   NRA A  +L++Y  A  D + AI ++  Y K Y RRGAA LA+   + A +D+++V +L  N+ +A  ++    KE + +   ++ +EAI     E+ +V +  + + IE++ +   A ++ D+
Sbjct:  136 KEKGNNYFKSGQYDEAIECYTRGMDADPYNAVLPTNRASAFFRLKKYAVAESDCNLAIALNHNYAKAYARRGAARLALKDLQGAKEDYEKVLELDVNNFEAKNELRKINKELQSSTSDVQEKEAI----EEKITVENEEEKKQIEIQQRKQQAIMQKDL 290          
BLAST of EY660032 vs. ExPASy Swiss-Prot
Match: SGTA_RAT (Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Rattus norvegicus GN=Sgta PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.315e-18
Identity = 49/126 (38.89%), Postives = 72/126 (57.14%), Query Frame = 2
Query:  191 SRAEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDAAQKVKECEKAVKKLKFEEA 568
            + AE LK   NE  + + +  A+ LY +AIELN  NAVY+ NRA A++KL  Y  A+QD  +AI IDP Y K Y R G A  ++ K  EA+  +++  +L P++      +K     + +LK  EA
Sbjct:   89 AEAERLKTEGNEQMKLENFEAAVHLYGKAIELNPANAVYFCNRAAAYSKLGNYVGAVQDCERAIGIDPGYSKAYGRMGLALSSLNKHAEAVAYYKKALELDPDNDTYKSNLK-----IAELKLREA 209          
BLAST of EY660032 vs. ExPASy Swiss-Prot
Match: SGTA_MOUSE (Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Mus musculus GN=Sgta PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 8.315e-18
Identity = 49/126 (38.89%), Postives = 72/126 (57.14%), Query Frame = 2
Query:  191 SRAEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDAAQKVKECEKAVKKLKFEEA 568
            + AE LK   NE  + + +  A+ LY +AIELN  NAVY+ NRA A++KL  Y  A+QD  +AI IDP Y K Y R G A  ++ K  EA+  +++  +L P++      +K     + +LK  EA
Sbjct:   90 AEAERLKTEGNEQMKLENFEAAVHLYGKAIELNPANAVYFCNRAAAYSKLGNYVGAVQDCERAIGIDPGYSKAYGRMGLALSSLNKHAEAVAYYKKALELDPDNDTYKSNLK-----IAELKLREA 210          
BLAST of EY660032 vs. ExPASy Swiss-Prot
Match: SGTA_HUMAN (Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Homo sapiens GN=SGTA PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.315e-18
Identity = 52/145 (35.86%), Postives = 77/145 (53.10%), Query Frame = 2
Query:  134 DLSKTIKVMPNMETENSSVSRAEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDAAQKVKECEKAVKKLKFEEA 568
            DL    +  P+ E      + AE LK   NE  + + +  A+  Y +AIELN  NAVY+ NRA A++KL  Y  A+QD  +AI IDP Y K Y R G A  ++ K  EA+  +++  +L P++      +K     + +LK  EA
Sbjct:   74 DLRSPARTPPSEEDS----AEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLK-----IAELKLREA 209          
BLAST of EY660032 vs. ExPASy Swiss-Prot
Match: STIP_SOYBN (Heat shock protein STI OS=Glycine max GN=STI PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.852e-17
Identity = 55/178 (30.90%), Postives = 92/178 (51.69%), Query Frame = 2
Query:  113 LVANIEPDLSKTI----KVMPNMET-ENSSVSRAEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDAAQKVKECEKAVKK----------LKFEEAIAVPESERHSV 601
            L  N  PD  K +    K    +E  E      A+E +   NE F+ +KY +A   Y++AI+ N ++A  Y+NRA  +TKL      ++DA K IE+DP + KGY R+GA   +M ++ +AL+ +++  K  PN+ +    ++ C + + K          LK  +A A+ + E  S+
Sbjct:  348 LTENRNPDTLKKLNEAEKAKKELEQQEYFDPKLADEAREKGNELFKQQKYPEATKHYTEAIKRNPKDAKAYSNRAACYTKLGAMPEGLKDAEKCIELDPTFSKGYTRKGAVQFSMKEYDKALETYREGLKHDPNNQELLDGIRRCVEQINKASRGDFTPEELKERQAKAMQDPEIQSI 525          
BLAST of EY660032 vs. ExPASy Swiss-Prot
Match: RPAP3_MOUSE (RNA polymerase II-associated protein 3 OS=Mus musculus GN=Rpap3 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.419e-17
Identity = 47/136 (34.56%), Postives = 77/136 (56.62%), Query Frame = 2
Query:  209 KALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDAAQKVKECEKAVKKLKFEEAIAVPESERHSVADSID 616
            K L N  F+  KY QAI+ Y++ I  +  NA+  ANRA A+ K++ Y  A +D ++AI +D  Y K + RRG A   +GK  EA +DF+ V  L P +  AA ++   +K + +    + + +  ++RH V  ++D
Sbjct:  288 KDLGNGFFKEGKYEQAIECYTRGIAADRTNALLPANRAMAYLKIQRYEEAERDCTQAIVLDGSYSKAFARRGTARTFLGKINEAKQDFETVLLLEPGNKQAATELSRIKKELIEKGHWDDVFLDSTQRHHVVKAVD 423          

HSP 2 Score: 77.7962 bits (190), Expect = 9.514e-14
Identity = 39/117 (33.33%), Postives = 72/117 (61.54%), Query Frame = 2
Query:  194 RAEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDAAQKVKECEKAV 544
            +A  LK   N+ F+  KY +AI+ Y++ ++ +  N V   NRA A+ +L+++  A  D + AI +   Y K Y RRGAA  A+ K ++A KD+++V +L P++ +A  ++++  +A+
Sbjct:  133 KALVLKEKGNKYFKQGKYDEAIECYTKGMDADPYNPVLPTNRASAYFRLKKFAVAESDCNLAIALSRTYTKAYARRGAARFALQKLEDARKDYEKVLELEPDNFEATNELRKINQAL 249          
BLAST of EY660032 vs. ExPASy Swiss-Prot
Match: SGT_DICDI (Small glutamine-rich tetratricopeptide repeat-containing protein OS=Dictyostelium discoideum GN=sgt PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.160e-17
Identity = 53/182 (29.12%), Postives = 98/182 (53.85%), Query Frame = 2
Query:  167 METENSSVSR-AEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDAAQKVKECEKAVKKLKFEEAIAVPESERHSVADSIDYRSIEVEPQYSGARIEGDVITLDFVKKMMDD 709
            ME++   V   AE+LK   N      K+ +A+  Y++AI  ++ NA+Y+ANRA  ++ L+ +  +I+D  +AI+ +P Y K Y R G+AY ++GKF EA++ + +  +L PN+      +   E+        +A A+P          +D+ S+   P   G  +  ++++   +K+MMD+
Sbjct:  134 MESKAGEVKAIAEKLKNEGNAKLNEGKHQEALSCYNKAILYDNTNAIYFANRAATYSALQNFEKSIEDCLEAIKRNPNYGKAYTRMGSAYTSLGKFSEAMEAYNKAIELEPNNETFKASLANAERLAAAAN-NQAPAMPNIPGMPDLGGLDFGSLLSNPAIRG--LANNLMSDPKMKEMMDN 312          
The following BLAST results are available for this feature:
BLAST of EY660032 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
SGT2_YEAST3.607e-2139.74Small glutamine-rich tetratricopeptide repeat-cont... [more]
RPAP3_CHICK1.283e-1831.25RNA polymerase II-associated protein 3 OS=Gallus g... [more]
SGTA_BOVIN2.188e-1835.21Small glutamine-rich tetratricopeptide repeat-cont... [more]
RPAP3_XENTR4.875e-1842.19RNA polymerase II-associated protein 3 OS=Xenopus ... [more]
SGTA_RAT8.315e-1838.89Small glutamine-rich tetratricopeptide repeat-cont... [more]
SGTA_MOUSE8.315e-1838.89Small glutamine-rich tetratricopeptide repeat-cont... [more]
SGTA_HUMAN8.315e-1835.86Small glutamine-rich tetratricopeptide repeat-cont... [more]
STIP_SOYBN1.852e-1730.90Heat shock protein STI OS=Glycine max GN=STI PE=2 ... [more]
RPAP3_MOUSE2.419e-1734.56RNA polymerase II-associated protein 3 OS=Mus musc... [more]
SGT_DICDI3.160e-1729.12Small glutamine-rich tetratricopeptide repeat-cont... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-017-G09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660032 ID=EY660032; Name=EY660032; organism=Citrus sinensis; type=EST; length=904bp
TGCAGGACCGGTCCGGAATTCTCAAAAAAGGGACGCGTCCGCTCAGAGTT
ACAGAAAGAAACTCTCCGAGGGAGAACTGGATAAGGGGATGAGATCTTAA
TTATGACCTCTATTGGTTGCCAACATTGAACCTGACTTGTCAAAGACGAT
AAAAGTTATGCCCAATATGGAAACTGAAAATTCTAGTGTTTCAAGAGCTG
AAGAACTCAAAGCCCTTGCTAATGAAGCATTCAGAGCCAAGAAATATTCC
CAAGCTATTGATTTATATTCCCAAGCAATTGAATTAAACAGTCAGAATGC
TGTGTATTATGCCAACCGTGCATTTGCCCACACTAAGCTGGAGGAGTATG
GTAGCGCCATACAGGATGCTTCAAAAGCTATTGAAATTGATCCAAGATAT
CCAAAGGGTTACTATAGGCGAGGTGCCGCTTATCTTGCCATGGGGAAATT
TAAAGAAGCACTAAAGGACTTCCAACAGGTCAAGAAACTTTCCCCAAATG
ATCCCGATGCTGCCCAGAAAGTTAAGGAATGTGAAAAAGCAGTAAAGAAA
CTAAAATTCGAAGAAGCAATTGCTGTCCCTGAGTCAGAAAGGCATTCAGT
AGCAGATTCCATTGACTATCGGTCCATAGAGGTGGAGCCACAATATTCTG
GGGCAAGGATAGAGGGAGATGTTATTACTTTGGATTTTGTGAAGAAAATG
ATGGATGATTTCAAGAATCAGAAGTGCTTACACAAAAGATATGCTTTTCA
GATTGTCTTGCAAACNAGGGAAATGTTACGAGCTCTGCCTTCTCTTGTTG
AATAGACATCCCTGATGGAAGCATTTTACAGNCTGTGGTGATGTACATGG
GNCAGTTTATGATTTGNTGAAATTTTTGAGCTTATGGGCTTCGTCAGAAA
GAAT
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