EY660032

Overview
NameEY660032
Unique NameEY660032
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length904
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660032 vs. ExPASy Swiss-Prot
Match: TOM34_RAT (Mitochondrial import receptor subunit TOM34 OS=Rattus norvegicus GN=Tomm34 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.374e-12
Identity = 38/124 (30.65%), Postives = 65/124 (52.42%), Query Frame = 2
Query:  140 SKTIKVMPNMETENSSVSRAEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDA 511
            SK      N       V RA  LK   NE  +   + +AI+ YS+++  +S  +  Y+NRA  H  L++Y  A +D ++A+++D +  K +YRR  AY A+  +K +L D   + ++ P +  A
Sbjct:  174 SKETTATKNRVPSAGDVERARVLKEEGNELVKKGNHKKAIEKYSESLLFSSLESATYSNRALCHLVLKQYKEAEKDCTEALKLDGKNVKAFYRRAQAYKALKDYKSSLADISSLLQIEPRNGPA 297          
BLAST of EY660032 vs. ExPASy Swiss-Prot
Match: DNJC7_MOUSE (DnaJ homolog subfamily C member 7 OS=Mus musculus GN=Dnajc7 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.794e-12
Identity = 37/135 (27.41%), Postives = 67/135 (49.63%), Query Frame = 2
Query:  161 PNMETENSSVSRAEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDAAQKVKECEKAVKKLKFEE 565
            P +  +  +   AE  K   N  +  K Y++A + Y++AI++   NA YY NRA     L  +  A+ DA +++ +D  + +G+ R G  +L++G    A + FQ+  +L   +  A Q+ K     ++  K  E
Sbjct:   16 PELLEDEDAKREAESFKEQGNAYYAKKDYNEAYNYYTKAIDMCPNNASYYGNRAATLMMLGRFREALGDAQQSVRLDDSFVRGHLREGKCHLSLGNAMAACRSFQRALELDHKNAQAQQEFKNANAVMEYEKIAE 150          

HSP 2 Score: 73.559 bits (179), Expect = 1.794e-12
Identity = 44/164 (26.83%), Postives = 88/164 (53.66%), Query Frame = 2
Query:  143 KTIKVMPNMETENSSVSRAEELKAL---ANEAFRAKKYSQAIDLYSQAIELNSQN----AVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDAAQKVKECEKAVKKLKFEEAIAVPESERHSVADSI 613
            + +++ P+ E    +   A+ LKA     N+AF+   Y  A +LY++A+ ++  N    A  Y NR   ++KL +   AI+D + A+++D  Y K Y RR   Y+   +F+EA++D+++V + +    +  Q +K  +  +KK K ++   +   ++++  D I
Sbjct:  235 QALRMAPDHEKACVACRNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNAKLYCNRGTVNSKLRQLEDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQFEEAVRDYEKVYQ-TEKTKEHKQLLKNAQLELKKSKRKDYYKILGVDKNASEDEI 397          
BLAST of EY660032 vs. ExPASy Swiss-Prot
Match: DNJC7_HUMAN (DnaJ homolog subfamily C member 7 OS=Homo sapiens GN=DNAJC7 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.794e-12
Identity = 37/135 (27.41%), Postives = 68/135 (50.37%), Query Frame = 2
Query:  161 PNMETENSSVSRAEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDAAQKVKECEKAVKKLKFEE 565
            P +  +  +   AE  K   N  +  K Y++A + Y++AI++  +NA YY NRA     L  +  A+ DA +++ +D  + +G+ R G  +L++G    A + FQ+  +L   +  A Q+ K     ++  K  E
Sbjct:   16 PELLDDQEAKREAETFKEQGNAYYAKKDYNEAYNYYTKAIDMCPKNASYYGNRAATLMMLGRFREALGDAQQSVRLDDSFVRGHLREGKCHLSLGNAMAACRSFQRALELDHKNAQAQQEFKNANAVMEYEKIAE 150          

HSP 2 Score: 72.4034 bits (176), Expect = 3.997e-12
Identity = 43/164 (26.22%), Postives = 88/164 (53.66%), Query Frame = 2
Query:  143 KTIKVMPNMETENSSVSRAEELKAL---ANEAFRAKKYSQAIDLYSQAIELNSQN----AVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDAAQKVKECEKAVKKLKFEEAIAVPESERHSVADSI 613
            + +++ P+ E    +   A+ LKA     N+AF+   Y  A +LY++A+ ++  N    A  Y NR   ++KL +   AI+D + A+++D  Y K Y RR   Y+   +++EA++D+++V + +    +  Q +K  +  +KK K ++   +   ++++  D I
Sbjct:  235 QALRMAPDHEKACIACRNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNAKLYCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEKVYQ-TEKTKEHKQLLKNAQLELKKSKRKDYYKILGVDKNASEDEI 397          
BLAST of EY660032 vs. ExPASy Swiss-Prot
Match: TOM70_MOUSE (Mitochondrial import receptor subunit TOM70 OS=Mus musculus GN=Tomm70a PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.343e-12
Identity = 40/107 (37.38%), Postives = 61/107 (57.01%), Query Frame = 2
Query:  176 ENSSVSRAEELKALANEAFRAKKYSQAIDLYSQAIEL-----NSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQV 481
            E SS+  A+  K   N+ F+A KY QAI  Y++AI L     N   + +Y NRA A  +L+++    QD +KA+E++P+Y K  +RR  A+  +   KE L+D   V
Sbjct:  110 EMSSLDSAQAAKNKGNKYFKAGKYEQAIQCYTEAISLCPTEKNVDLSTFYQNRAAAFEQLQKWKEVAQDCTKAVELNPKYVKALFRRAKAHEKLDNKKECLEDVTAV 216          
BLAST of EY660032 vs. ExPASy Swiss-Prot
Match: UN45A_MOUSE (Protein unc-45 homolog A OS=Mus musculus GN=Unc45a PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 3.060e-12
Identity = 41/117 (35.04%), Postives = 60/117 (51.28%), Query Frame = 2
Query:  161 PNMETENSSVSRAEELKALANEAFRAKKYSQAIDLYSQAIELNS---QNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPND 502
            P     +   S AE+L+   NE F+   Y  A+  Y+QA+ L +     A+ + NRA  H KLE+Y  A  +ASKAIE D    K  YRR  A   +G+  +A+ D ++   L P +
Sbjct:    9 PEPRPSDPGASSAEQLRKEGNELFKCGDYEGALTAYTQALSLGATPQDQAILHRNRAACHLKLEDYSKAESEASKAIEKDGGDVKALYRRSQALEKLGRLDQAVLDLKRCVSLEPKN 125          
BLAST of EY660032 vs. ExPASy Swiss-Prot
Match: STUB1_HUMAN (STIP1 homology and U box-containing protein 1 OS=Homo sapiens GN=STUB1 PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 5.220e-12
Identity = 49/162 (30.25%), Postives = 73/162 (45.06%), Query Frame = 2
Query:  197 AEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSP----NDPDAAQKVKECEKAVKKLKFEEAIAVPESERHSVADSIDYRSIEVEPQYSGARIEGD 670
            A+ELK   N  F  +KY +A   Y +AI  N   AVYY NRA  + K++++  A+ D  +A+E+D +  K ++  G   L M  + EA+ + Q+   L+     N  D         K  +    EE     ESE HS    +     E E +      EGD
Sbjct:   26 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQHEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRWNSIEERRIHQESELHSYLSRLIAAERERELEECQRNHEGD 187          
BLAST of EY660032 vs. ExPASy Swiss-Prot
Match: DNJC7_PONAB (DnaJ homolog subfamily C member 7 OS=Pongo abelii GN=DNAJC7 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.220e-12
Identity = 37/135 (27.41%), Postives = 67/135 (49.63%), Query Frame = 2
Query:  161 PNMETENSSVSRAEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDAAQKVKECEKAVKKLKFEE 565
            P +  +  +   AE  K   N  +  K Y++A + Y++AI++  +NA YY NRA     L  +  A+ DA +++ +D  + +G  R G  +L++G    A + FQ+  +L   +  A Q+ K     ++  K  E
Sbjct:   16 PELLDDQEAKREAETFKEQGNAYYAKKDYNEAYNYYTKAIDMCPKNASYYGNRAATLMMLGRFREALGDAQQSVRLDDSFVRGRLREGKCHLSLGNAMAACRSFQRALELDHKNAQAQQEFKNANAVMEYEKIAE 150          

HSP 2 Score: 72.0182 bits (175), Expect = 5.220e-12
Identity = 43/164 (26.22%), Postives = 87/164 (53.05%), Query Frame = 2
Query:  143 KTIKVMPNMETENSSVSRAEELKAL---ANEAFRAKKYSQAIDLYSQAIELNSQN----AVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDAAQKVKECEKAVKKLKFEEAIAVPESERHSVADSI 613
            + +++ P+ E    +   A+ LKA     N+AF+   Y  A +LY++A+ ++  N    A  Y NR   ++KL +   AI+D + A+++D  Y K Y RR   Y+   +++EA++D+++V + +    +  Q +K  +  +KK K  +   +   ++++  D I
Sbjct:  235 QALRMAPDHEKACIACRNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNAKLYCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEKVYQ-TEKTKEHKQLLKSAQLELKKSKRRDYYKILGVDKNASEDEI 397          
BLAST of EY660032 vs. ExPASy Swiss-Prot
Match: TTC1_MOUSE (Tetratricopeptide repeat protein 1 OS=Mus musculus GN=Ttc1 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.818e-12
Identity = 48/150 (32.00%), Postives = 75/150 (50.00%), Query Frame = 2
Query:  128 EPDLSKTIKVMPNMETENSSVSRAE--ELKALANEAFRAKKYSQAIDLYSQAIEL-----NSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDAAQKVKECEKAVKKLK 556
            E D    I++  NM  E     R E  +LK   NE F+   Y +A   YSQA+++         +V ++NRA A  K ++  +AI D SKAI+++P Y +   RR   Y    K  EAL+D++ V +    DP   Q  + C +  K+++
Sbjct:   91 ELDEEYLIELEKNMPEEEKQKRREESAKLKEEGNERFKRGDYMEAESSYSQALQMCPACFQKDRSVLFSNRAAARMKQDKKETAITDCSKAIQLNPTYIRAILRRAELYEKTDKLDEALEDYKSVLE---KDPSVHQAREACMRLPKQIE 237          
BLAST of EY660032 vs. ExPASy Swiss-Prot
Match: UN45A_HUMAN (Protein unc-45 homolog A OS=Homo sapiens GN=UNC45A PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.163e-11
Identity = 42/117 (35.90%), Postives = 59/117 (50.43%), Query Frame = 2
Query:  161 PNMETENSSVSRAEELKALANEAFRAKKYSQAIDLYSQAIELNS---QNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPND 502
            P         S  E+L+   NE F+   Y  A+  Y+QA+ L++     AV + NRA  H KLE+Y  A  +ASKAIE D    K  YRR  A   +G+  +A+ D Q+   L P +
Sbjct:    9 PEPRPATPGASSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKN 125          
BLAST of EY660032 vs. ExPASy Swiss-Prot
Match: TTC28_HUMAN (Tetratricopeptide repeat protein 28 OS=Homo sapiens GN=TTC28 PE=1 SV=4)

HSP 1 Score: 70.8626 bits (172), Expect = 1.163e-11
Identity = 34/97 (35.05%), Postives = 64/97 (65.98%), Query Frame = 2
Query:  188 VSRAEELKAL--ANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDF 472
            +S+AE ++ +  +N+A     +  AI LY++A+ ++ QN + Y+NR+ A+ K+++Y  A+ DA KA  ++P++PK Y+R+G A   +G+  +AL  F
Sbjct:   53 LSKAEFVEKVRQSNQACHDGDFHTAIVLYNEALAVDPQNCILYSNRSAAYMKIQQYDKALDDAIKARLLNPKWPKAYFRQGVALQYLGRHADALAAF 149          
The following BLAST results are available for this feature:
BLAST of EY660032 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
TOM34_RAT1.374e-1230.65Mitochondrial import receptor subunit TOM34 OS=Rat... [more]
DNJC7_MOUSE1.794e-1227.41DnaJ homolog subfamily C member 7 OS=Mus musculus ... [more]
DNJC7_HUMAN1.794e-1227.41DnaJ homolog subfamily C member 7 OS=Homo sapiens ... [more]
TOM70_MOUSE2.343e-1237.38Mitochondrial import receptor subunit TOM70 OS=Mus... [more]
UN45A_MOUSE3.060e-1235.04Protein unc-45 homolog A OS=Mus musculus GN=Unc45a... [more]
STUB1_HUMAN5.220e-1230.25STIP1 homology and U box-containing protein 1 OS=H... [more]
DNJC7_PONAB5.220e-1227.41DnaJ homolog subfamily C member 7 OS=Pongo abelii ... [more]
TTC1_MOUSE6.818e-1232.00Tetratricopeptide repeat protein 1 OS=Mus musculus... [more]
UN45A_HUMAN1.163e-1135.90Protein unc-45 homolog A OS=Homo sapiens GN=UNC45A... [more]
TTC28_HUMAN1.163e-1135.05Tetratricopeptide repeat protein 28 OS=Homo sapien... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-017-G09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660032 ID=EY660032; Name=EY660032; organism=Citrus sinensis; type=EST; length=904bp
TGCAGGACCGGTCCGGAATTCTCAAAAAAGGGACGCGTCCGCTCAGAGTT
ACAGAAAGAAACTCTCCGAGGGAGAACTGGATAAGGGGATGAGATCTTAA
TTATGACCTCTATTGGTTGCCAACATTGAACCTGACTTGTCAAAGACGAT
AAAAGTTATGCCCAATATGGAAACTGAAAATTCTAGTGTTTCAAGAGCTG
AAGAACTCAAAGCCCTTGCTAATGAAGCATTCAGAGCCAAGAAATATTCC
CAAGCTATTGATTTATATTCCCAAGCAATTGAATTAAACAGTCAGAATGC
TGTGTATTATGCCAACCGTGCATTTGCCCACACTAAGCTGGAGGAGTATG
GTAGCGCCATACAGGATGCTTCAAAAGCTATTGAAATTGATCCAAGATAT
CCAAAGGGTTACTATAGGCGAGGTGCCGCTTATCTTGCCATGGGGAAATT
TAAAGAAGCACTAAAGGACTTCCAACAGGTCAAGAAACTTTCCCCAAATG
ATCCCGATGCTGCCCAGAAAGTTAAGGAATGTGAAAAAGCAGTAAAGAAA
CTAAAATTCGAAGAAGCAATTGCTGTCCCTGAGTCAGAAAGGCATTCAGT
AGCAGATTCCATTGACTATCGGTCCATAGAGGTGGAGCCACAATATTCTG
GGGCAAGGATAGAGGGAGATGTTATTACTTTGGATTTTGTGAAGAAAATG
ATGGATGATTTCAAGAATCAGAAGTGCTTACACAAAAGATATGCTTTTCA
GATTGTCTTGCAAACNAGGGAAATGTTACGAGCTCTGCCTTCTCTTGTTG
AATAGACATCCCTGATGGAAGCATTTTACAGNCTGTGGTGATGTACATGG
GNCAGTTTATGATTTGNTGAAATTTTTGAGCTTATGGGCTTCGTCAGAAA
GAAT
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