EY660032

Overview
NameEY660032
Unique NameEY660032
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length904
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660032 vs. ExPASy Swiss-Prot
Match: TTC1_HUMAN (Tetratricopeptide repeat protein 1 OS=Homo sapiens GN=TTC1 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.163e-11
Identity = 48/154 (31.17%), Postives = 75/154 (48.70%), Query Frame = 2
Query:  116 VANIEPDLSKTIKVMPNMETENSSVSRAEE--LKALANEAFRAKKYSQAIDLYSQAIEL-----NSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDAAQKVKECEKAVKKLK 556
            V + E D    I++  NM  E     R E   LK   NE F+   Y +A   YS+A+E+       + ++ ++NRA A  K ++   AI D SKAI+++P Y +   RR   Y    K  EAL+D+   K +   DP   Q  + C +  K+++
Sbjct:   87 VNSSELDEEYLIELEKNMSDEEKQKRREESTRLKEEGNEQFKKGDYIEAESSYSRALEMCPSCFQKERSILFSNRAAARMKQDKKEMAINDCSKAIQLNPSYIRAILRRAELYEKTDKLDEALEDY---KSILEKDPSIHQAREACMRLPKQIE 237          
BLAST of EY660032 vs. ExPASy Swiss-Prot
Match: TOM34_PONAB (Mitochondrial import receptor subunit TOM34 OS=Pongo abelii GN=TOMM34 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.591e-11
Identity = 35/130 (26.92%), Postives = 71/130 (54.62%), Query Frame = 2
Query:  140 SKTIKVMPNMETENSSVSRAEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDAAQKVKE 529
            SK      N       V +A+ LK   NE  +   + +AI+ YS+++  ++  +  Y+NRA  +  L++Y  A++D ++A+++D +  K +YRR  A+ A+  +K +  D   + ++ P +   AQK+++
Sbjct:  174 SKETTATKNRVPSAGDVEKAKVLKEEGNELVKKGNHKKAIEKYSESLLCSNLESATYSNRALCYLVLKQYTEAVKDCTEALKLDGKNVKAFYRRAQAHKALKDYKSSFADISNLLQIEPRN-GPAQKLRQ 302          
BLAST of EY660032 vs. ExPASy Swiss-Prot
Match: UN45B_MOUSE (Protein unc-45 homolog B OS=Mus musculus GN=Unc45b PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.384e-11
Identity = 40/123 (32.52%), Postives = 63/123 (51.22%), Query Frame = 2
Query:  191 SRAEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVY---YANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDAAQKVKECEKAVKK 550
            + A +LK   N  F+ + Y  A   YSQA++L    A+    Y NRA    K+E Y  A  DAS+AI+I+    K  YRR  A   +GK  +A KD Q+   L P + +  + ++    ++++
Sbjct:    4 AEAAQLKEEGNRHFQLQDYKAATKSYSQALKLTKDKALLATLYRNRAACGLKMESYAQAASDASRAIDINSADIKALYRRCQALEHLGKLDQAFKDVQRCATLEPRNQNFQETLRRLNTSIQE 126          
BLAST of EY660032 vs. ExPASy Swiss-Prot
Match: TTC12_HUMAN (Tetratricopeptide repeat protein 12 OS=Homo sapiens GN=TTC12 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.384e-11
Identity = 46/165 (27.88%), Postives = 81/165 (49.09%), Query Frame = 2
Query:  116 VANIEPDLSKTIKVMPNMETENSSVSRAEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDAAQKVKECEKAVKKLKFEEAIAVPESERHSVADS 610
            +A++E D  +  K       EN  +  A+ LK   NEAF    Y  AI  YS+ +E      V Y NRA A+ KLE+Y  A+ D   A++ D +  K Y+  G A LA+  +  + + ++++ +++P      +   + +  + ++  +E   + E E H + DS
Sbjct:   85 LASVEKDAKERAK----RRRENKVL--ADALKEKGNEAFAEGNYETAILRYSEGLEKLKDMKVLYTNRAQAYMKLEDYEKALVDCEWALKCDEKCTKAYFHMGKANLALKNYSVSRECYKKILEINP------KLQTQVKGYLNQVDLQEKADLQEKEAHELLDS 237          
BLAST of EY660032 vs. ExPASy Swiss-Prot
Match: TOM34_HUMAN (Mitochondrial import receptor subunit TOM34 OS=Homo sapiens GN=TOMM34 PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.384e-11
Identity = 35/130 (26.92%), Postives = 70/130 (53.85%), Query Frame = 2
Query:  140 SKTIKVMPNMETENSSVSRAEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDAAQKVKE 529
            SK      N       V +A  LK   NE  +   + +AI+ YS+++  ++  +  Y+NRA  +  L++Y  A++D ++A+++D +  K +YRR  A+ A+  +K +  D   + ++ P +   AQK+++
Sbjct:  174 SKETTATKNRVPSAGDVEKARVLKEEGNELVKKGNHKKAIEKYSESLLCSNLESATYSNRALCYLVLKQYTEAVKDCTEALKLDGKNVKAFYRRAQAHKALKDYKSSFADISNLLQIEPRN-GPAQKLRQ 302          
BLAST of EY660032 vs. ExPASy Swiss-Prot
Match: STUB1_MOUSE (STIP1 homology and U box-containing protein 1 OS=Mus musculus GN=Stub1 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.772e-11
Identity = 44/138 (31.88%), Postives = 65/138 (47.10%), Query Frame = 2
Query:  197 AEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSP----NDPDAAQKVKECEKAVKKLKFEEAIAVPESERHS 598
            A+ELK   N  F  +KY +A   Y +AI  N   AVYY NRA  + K+++   A+ D  +A+E+D +  K ++  G   L M  + EA+ + Q+   L+     N  D         K  +    EE     ESE HS
Sbjct:   27 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRWNSIEERRIHQESELHS 164          
BLAST of EY660032 vs. ExPASy Swiss-Prot
Match: UN45A_PONAB (Protein unc-45 homolog A OS=Pongo abelii GN=UNC45A PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.538e-11
Identity = 40/109 (36.70%), Postives = 59/109 (54.13%), Query Frame = 2
Query:  185 SVSRAEELKALANEAFRAKKYSQAIDLYSQAIELNS---QNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPND 502
            + S  E+L+   NE F+   Y  A+  Y+QA+ L++     AV + NRA  + KLE+Y  A  +ASKAIE D    K  YRR  A   +G+  +A+ D Q+   L P +
Sbjct:    2 TASSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACYLKLEDYDKAETEASKAIEKDGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKN 110          
BLAST of EY660032 vs. ExPASy Swiss-Prot
Match: STI1L_PLAFA (STI1-like protein (Fragment) OS=Plasmodium falciparum PE=4 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.845e-11
Identity = 38/113 (33.63%), Postives = 61/113 (53.98%), Query Frame = 2
Query:  197 AEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPND---PDAAQKVK 526
            A+ LK L N+ F+  KY +A+  +S AI  +  + V Y+N + A   L  +  A++ A+K I I   +PKGY R+G A   + +   A K + +  K+ PN+    DA  KV+
Sbjct:    7 AQRLKELGNKCFQEGKYEEAVKYFSDAITNDPLDHVLYSNLSGAFASLGRFYEALESANKCISIKKDWPKGYIRKGCAEHGLRQLSNAEKTYLEGLKIDPNNKSLQDALSKVR 119          
BLAST of EY660032 vs. ExPASy Swiss-Prot
Match: FKBP4_HUMAN (FK506-binding protein 4 OS=Homo sapiens GN=FKBP4 PE=1 SV=3)

HSP 1 Score: 67.781 bits (164), Expect = 9.845e-11
Identity = 39/122 (31.97%), Postives = 65/122 (53.28%), Query Frame = 2
Query:  230 FRAKKYSQAIDLYSQAI------------ELNSQNAVYYA---NRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDAAQKVKECEKAVKK 550
            F+  KY QA+  Y + +            E     A+  A   N A  H KL+ + +AI+  +KA+E+D    KG +RRG A+LA+  F+ A  DFQ+V +L PN+  A  ++  C++ +++
Sbjct:  281 FKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRR 402          
The following BLAST results are available for this feature:
BLAST of EY660032 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
TTC1_HUMAN1.163e-1131.17Tetratricopeptide repeat protein 1 OS=Homo sapiens... [more]
TOM34_PONAB2.591e-1126.92Mitochondrial import receptor subunit TOM34 OS=Pon... [more]
UN45B_MOUSE3.384e-1132.52Protein unc-45 homolog B OS=Mus musculus GN=Unc45b... [more]
TTC12_HUMAN3.384e-1127.88Tetratricopeptide repeat protein 12 OS=Homo sapien... [more]
TOM34_HUMAN3.384e-1126.92Mitochondrial import receptor subunit TOM34 OS=Hom... [more]
STUB1_MOUSE5.772e-1131.88STIP1 homology and U box-containing protein 1 OS=M... [more]
UN45A_PONAB7.538e-1136.70Protein unc-45 homolog A OS=Pongo abelii GN=UNC45A... [more]
STI1L_PLAFA9.845e-1133.63STI1-like protein (Fragment) OS=Plasmodium falcipa... [more]
FKBP4_HUMAN9.845e-1131.97FK506-binding protein 4 OS=Homo sapiens GN=FKBP4 P... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-017-G09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660032 ID=EY660032; Name=EY660032; organism=Citrus sinensis; type=EST; length=904bp
TGCAGGACCGGTCCGGAATTCTCAAAAAAGGGACGCGTCCGCTCAGAGTT
ACAGAAAGAAACTCTCCGAGGGAGAACTGGATAAGGGGATGAGATCTTAA
TTATGACCTCTATTGGTTGCCAACATTGAACCTGACTTGTCAAAGACGAT
AAAAGTTATGCCCAATATGGAAACTGAAAATTCTAGTGTTTCAAGAGCTG
AAGAACTCAAAGCCCTTGCTAATGAAGCATTCAGAGCCAAGAAATATTCC
CAAGCTATTGATTTATATTCCCAAGCAATTGAATTAAACAGTCAGAATGC
TGTGTATTATGCCAACCGTGCATTTGCCCACACTAAGCTGGAGGAGTATG
GTAGCGCCATACAGGATGCTTCAAAAGCTATTGAAATTGATCCAAGATAT
CCAAAGGGTTACTATAGGCGAGGTGCCGCTTATCTTGCCATGGGGAAATT
TAAAGAAGCACTAAAGGACTTCCAACAGGTCAAGAAACTTTCCCCAAATG
ATCCCGATGCTGCCCAGAAAGTTAAGGAATGTGAAAAAGCAGTAAAGAAA
CTAAAATTCGAAGAAGCAATTGCTGTCCCTGAGTCAGAAAGGCATTCAGT
AGCAGATTCCATTGACTATCGGTCCATAGAGGTGGAGCCACAATATTCTG
GGGCAAGGATAGAGGGAGATGTTATTACTTTGGATTTTGTGAAGAAAATG
ATGGATGATTTCAAGAATCAGAAGTGCTTACACAAAAGATATGCTTTTCA
GATTGTCTTGCAAACNAGGGAAATGTTACGAGCTCTGCCTTCTCTTGTTG
AATAGACATCCCTGATGGAAGCATTTTACAGNCTGTGGTGATGTACATGG
GNCAGTTTATGATTTGNTGAAATTTTTGAGCTTATGGGCTTCGTCAGAAA
GAAT
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