EY660008

Overview
NameEY660008
Unique NameEY660008
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length915
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660008 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 2.007e-27
Identity = 61/173 (35.26%), Postives = 91/173 (52.60%), Query Frame = 2
Query:  275 FENFFSKRNTPVAHAVGFWDYHSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRXAIPIYWNYNYGATGEALRADLXSHPEYIEQNATLCLEAGHWEVDDPGQKSQPSAHDAFVGTGSP 793
            FE     RN     A GF+ Y +F+ A   +    FG TG    + +E+ AFL     +T+ G+  A  GP +WG C+  E +P   YC  S ++  PC PG +YYGR  I + +N+NYG  G A+  DL S+P+ +  +AT+  +   W    P Q ++PS+HD   G  +P
Sbjct:   98 FERLLLHRNDGACPARGFYTYEAFLAAAAAFP--AFGGTGNTETRKREVAAFLGQTSHETTGGWPTAPDGPFSWGYCFKQEQNPPSDYCQPSPEW--PCAPGRKYYGRGPIQLSFNFNYGPAGRAIGVDLLSNPDLVATDATVSFKTALWFWMTP-QGNKPSSHDVITGRWAP 265          
BLAST of EY660008 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.838e-27
Identity = 62/173 (35.84%), Postives = 92/173 (53.18%), Query Frame = 2
Query:  275 FENFFSKRNTPVAHAVGFWDYHSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRXAIPIYWNYNYGATGEALRADLXSHPEYIEQNATLCLEAGHWEVDDPGQKSQPSAHDAFVGTGSP 793
            + + F  ++     A GF+ Y SF+ A  ++    F  TG    + +E+ AFLA +  +T+ G+  A  GP AWGLCY  E++P  SYCD + K  +PC PG  Y+GR  I I WN+NYG  G+AL  D   +PE +   + +  +   W    P + ++PS H   VG   P
Sbjct:   58 YASLFLHKDDAACPARGFYTYASFVRAATRFPR--FAATGCADARKREVAAFLAQISHETTGGWATAPDGPYAWGLCYKEEINPQSSYCDATDK-QWPCYPGKSYHGRGPIQISWNFNYGPAGQALGFDGLRNPEIVANCSDIAFQTALWFWMTP-RDTKPSCHQVMVGEYRP 226          
BLAST of EY660008 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.625e-27
Identity = 64/175 (36.57%), Postives = 90/175 (51.43%), Query Frame = 2
Query:  275 FENFFSKRNTPVAHAVGFWDYHSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRXAIPIYWNYNYGATGEALRADLXSHPEYIEQNATLCLEAGHWEVDDPGQKSQPSAHDAFVGTGSPPG 799
            F +    RN       GF+ Y +FI A   +   GFGTTG    + +EI AFLA    +T+ G+  A  GP AWG CY  E     +YC  S +  +PC  G +YYGR  I I +NYNYG  G+A+  DL ++P+ +  +A +  +   W    P Q  +PS H+   G  +P G
Sbjct:   74 FNDMLKHRNEGSCPGKGFYTYDAFIAAAKAFP--GFGTTGDTTTRKREIAAFLAQTSHETTGGWASAPDGPYAWGYCYLREQGSPGAYCVPSAQ--WPCAAGRKYYGRGPIQISYNYNYGQAGKAIGVDLVNNPDLVATDAVISFKTAFWFWMTP-QSPKPSCHNVITGGWTPSG 243          
BLAST of EY660008 vs. ExPASy Swiss-Prot
Match: CHI3_TOBAC (Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.625e-27
Identity = 64/182 (35.16%), Postives = 92/182 (50.55%), Query Frame = 2
Query:  248 ISDYFQVYQFENFFSKRNTPVAHAVGFWDYHSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRXAIPIYWNYNYGATGEALRADLXSHPEYIEQNATLCLEAGHWEVDDPGQKSQPSAHDAFVGTGSP 793
            IS+      F+     RN        F+ Y++FITA   ++  GFGTTG    + +E+ AF A    +T+ G+  A  G  AWG CY  E     SYC  S ++  PC PG +YYGR  I I +NYNYG  G A+  +L ++P+ +  NA +  ++  W      Q  +PS HD   G  +P
Sbjct:   85 ISNIISSSMFDQMLKHRNDNTCQGKSFYTYNAFITAARSFR--GFGTTGDTTRRKREVAAFFAQTSHETTGGWDTAPDGRYAWGYCYLREQGNPPSYCVQSSQW--PCAPGQKYYGRGPIQISYNYNYGPCGRAIGQNLLNNPDLVATNAVVSFKSAIW-FWMTAQSPKPSCHDVITGRWTP 261          
BLAST of EY660008 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.218e-26
Identity = 62/173 (35.84%), Postives = 89/173 (51.45%), Query Frame = 2
Query:  275 FENFFSKRNTPVAHAVGFWDYHSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRXAIPIYWNYNYGATGEALRADLXSHPEYIEQNATLCLEAGHWEVDDPGQKSQPSAHDAFVGTGSP 793
            F+     RN     A GF+ Y +FI A   Y    FG TG    + +EI AFL     +T+ G+  A  GP AWG C+  E +PS +YC  + ++  PC PG +YYGR  I I WNYNYG  G A+  DL + P+ +  ++ +  ++  W      Q  +PS+HD      +P
Sbjct:   85 FDQMLKHRNDGACPAKGFYTYDAFIAAAKAYP--SFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERNPS-TYCSATPQF--PCAPGQQYYGRGPIQISWNYNYGQCGRAIGVDLLNKPDLVATDSVISFKSALW-FWMTAQSPKPSSHDVITSRWTP 251          
BLAST of EY660008 vs. ExPASy Swiss-Prot
Match: CHI5_PHAVU (Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.897e-26
Identity = 62/173 (35.84%), Postives = 89/173 (51.45%), Query Frame = 2
Query:  275 FENFFSKRNTPVAHAVGFWDYHSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRXAIPIYWNYNYGATGEALRADLXSHPEYIEQNATLCLEAGHWEVDDPGQKSQPSAHDAFVGTGSP 793
            F+     RN     A GF+ Y +FI A   Y    FG TG    + +EI AFL     +T+ G+  A  GP AWG C+  E +PS +YC  + ++  PC PG +YYGR  I I WNYNYG  G A+  DL + P+ +  ++ +  ++  W      Q  +PS+HD      +P
Sbjct:   84 FDQVLKHRNDGACPAKGFYTYDAFIAAAKAYP--SFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERNPS-AYCSATPQF--PCAPGQQYYGRGPIQISWNYNYGQCGRAIGVDLLNKPDLVATDSVISFKSALW-FWMTAQSPKPSSHDVITSRWTP 250          
BLAST of EY660008 vs. ExPASy Swiss-Prot
Match: CHIA_SECCE (Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.942e-26
Identity = 61/175 (34.86%), Postives = 88/175 (50.29%), Query Frame = 2
Query:  275 FENFFSKRNTPVAHAVGFWDYHSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRXAIPIYWNYNYGATGEALRADLXSHPEYIEQNATLCLEAGHWEVDDPGQKSQPSAHDAFVGTGSPPG 799
            F+     RN     A GF+ Y +F+ A   +   GFGTTG+   + +E+ AFLA    +T+ G+  A  G  AWG C+  E   + +YC  S +  +PC PG  YYGR  I +  NYNYG  G A+  DL  +P+ +  + T+  +   W      Q  +PS+H    G  SP G
Sbjct:   89 FDRMLLHRNDGACQAKGFYTYDAFVAAAGAFP--GFGTTGSTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGATSNYCTPSAQ--WPCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMW-FWMTAQAPKPSSHAVITGQWSPSG 258          
BLAST of EY660008 vs. ExPASy Swiss-Prot
Match: CHI1_HORVU (26 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=4)

HSP 1 Score: 118.627 bits (296), Expect = 4.942e-26
Identity = 61/175 (34.86%), Postives = 88/175 (50.29%), Query Frame = 2
Query:  275 FENFFSKRNTPVAHAVGFWDYHSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRXAIPIYWNYNYGATGEALRADLXSHPEYIEQNATLCLEAGHWEVDDPGQKSQPSAHDAFVGTGSPPG 799
            F+     RN     A GF+ Y +F+ A   ++  GFGTTG    + +E+ AFLA    +T+ G+  A  G  AWG C+  E   + +YC  S ++  PC PG  YYGR  I +  NYNYG  G A+  DL  +P+ +  + T+  +   W      Q  +PS+H    G  SP G
Sbjct:   86 FDRMLLHRNDGACQAKGFYTYDAFVAAASAFR--GFGTTGGTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGATSNYCTPSAQW--PCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMW-FWMTAQAPKPSSHAVITGQWSPSG 255          
BLAST of EY660008 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 8.430e-26
Identity = 60/173 (34.68%), Postives = 87/173 (50.29%), Query Frame = 2
Query:  275 FENFFSKRNTPVAHAVGFWDYHSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRXAIPIYWNYNYGATGEALRADLXSHPEYIEQNATLCLEAGHWEVDDPGQKSQPSAHDAFVGTGSP 793
            F+     RN       GF+ Y++FI A   +   GFGT+G    + +EI AF A    +T+ G+  A  GP AWG C+  E      YC  S ++  PC PG +Y+GR  I I  NYNYG  G A+  DL ++P+ +  +  +  ++  W    P Q  +PS HD  +G   P
Sbjct:   84 FDQMLKHRNDNACQGKGFYSYNAFINAARSFP--GFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQGSPGDYCTPSGQW--PCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSALWFWMTP-QSPKPSCHDVIIGRWQP 251          
BLAST of EY660008 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 8.430e-26
Identity = 60/173 (34.68%), Postives = 87/173 (50.29%), Query Frame = 2
Query:  275 FENFFSKRNTPVAHAVGFWDYHSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRXAIPIYWNYNYGATGEALRADLXSHPEYIEQNATLCLEAGHWEVDDPGQKSQPSAHDAFVGTGSP 793
            F+     RN       GF+ Y++FI A   +   GFGT+G    + +EI AF A    +T+ G+  A  GP AWG C+  E      YC  S ++  PC PG +Y+GR  I I  NYNYG  G A+  DL ++P+ +  +  +  ++  W    P Q  +PS HD  +G   P
Sbjct:   89 FDQMLKHRNDNACQGKGFYSYNAFINAARSFP--GFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQGSPGDYCTPSGQW--PCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSALWFWMTP-QSPKPSCHDVIIGRWQP 256          
The following BLAST results are available for this feature:
BLAST of EY660008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
CHI2_ORYSJ2.007e-2735.26Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI10_ORYSJ5.838e-2735.84Chitinase 10 OS=Oryza sativa subsp. japonica GN=Ch... [more]
CHIB_VITVI7.625e-2736.57Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE... [more]
CHI3_TOBAC7.625e-2735.16Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3... [more]
CHIT_PHAVU2.218e-2635.84Endochitinase OS=Phaseolus vulgaris PE=1 SV=1[more]
CHI5_PHAVU2.897e-2635.84Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1[more]
CHIA_SECCE4.942e-2634.86Basic endochitinase A OS=Secale cereale GN=rsca PE... [more]
CHI1_HORVU4.942e-2634.8626 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=... [more]
CHI2_TOBAC8.430e-2634.68Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1... [more]
CHI1_TOBAC8.430e-2634.68Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-017-E06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660008 ID=EY660008; Name=EY660008; organism=Citrus sinensis; type=EST; length=915bp
TCAACAACGCGCGCGTCCGCCAAGTGATTTCCTAAAAACAGGTAGATCTG
GTGAGAACGAGAAAATAAAGATGAAGAATGGCATTGTGCCAATGACACTG
ACAGTGGCACTAGTACTGGCACTGGCAGTGAGTTTGGCAAATGGAGATGA
ATCAGAGAAGGTGATAGTGAAGAAGGTGAAGGGGAAAAAAGTTTGCATAA
AAGGGTGGGAGTGCCCAACATGGTCGAAATTCTGCTGTAACGAGACGATA
TCAGACTATTTCCAGGTTTACCAGTTTGAGAATTTCTTCTCGAAAAGGAA
CACGCCGGTGGCACATGCCGTGGGCTTCTGGGATTATCACTCTTTCATTA
CTGCCACCGTCAAATATCAGCCCCTCGGCTTCGGTACCACCGGTACTAAG
CTTGATAAGATGAAGGAGATTTGCGCTTTTCTTGCCCACGTCGGCTGCAA
GACCTCTTGTGGATATGGGGTGGCCACTGGAGGACCATTGGCCTGGGGAC
TTTGCTACAACCATGAAATGAGCCCCAGTCAGTCATATTGTGATGATTCC
TACAAATACACATATCCCTGCACCCCTGGAGCTGAGTACTACGGCCGANG
TGCTATACCTATATACTGGAACTATAACTATGGAGCTACTGGGGAAGCAT
TGAGGGCGGATCTGNTGAGTCATCCTGAATACATTGAGCAGAATGCTACC
CTTTGCCTTGAGGCTGGNCATTGGGAAGTGGATGACCCCGGNCAGAAATC
CCAGCCTTCAGCCCATGATGCCTTTGTTGGCACTGGGAGCCCACCAGGAT
GATACTTTGTCCAACGGGGACCTACTTTGGGACACAATGATTATTCTCTA
TGGGGAAAGCGTATGCGGCCAGGGTGATTTTGATGCTATTGACACATTGC
CCCTCATACCTGATT
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