EY660008

Overview
NameEY660008
Unique NameEY660008
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length915
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660008 vs. ExPASy Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.878e-25
Identity = 61/185 (32.97%), Postives = 90/185 (48.65%), Query Frame = 2
Query:  245 TISDYFQVYQFENFFSKRNTPVAHAVGFWDYHSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRXAIPIYWNYNYGATGEALRADLXSHPEYIEQNATLCLEAGHWEVDDPGQKSQPSAHDAFVGTGSPPG 799
            ++S      QF+     RN     A GF+ Y +F+ A   +   GFG TG+   + +++ AFLA    +T+ G+  A  G  AWG C+  E   +  YC  S ++  PC PG  YYGR  I +  NYNYG  G A+  DL  +P+ +  + T+  +   W      Q  +PS+H    G  SP G
Sbjct:   24 SVSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFP--GFGATGSTDARKRDVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQW--PCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTALW-FWMTAQAPKPSSHAVITGKWSPSG 203          
BLAST of EY660008 vs. ExPASy Swiss-Prot
Match: CHI1_SOLTU (Endochitinase 1 (Fragment) OS=Solanum tuberosum GN=CHTB1 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.453e-25
Identity = 62/176 (35.23%), Postives = 90/176 (51.14%), Query Frame = 2
Query:  275 FENFFSKRNTPVAHAVG-FWDYHSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRXAIPIYWNYNYGATGEALRADLXSHPEYIEQNATLCLEAGHWEVDDPGQKSQPSAHDAFVGTGSPPG 799
            F+   + RN       G F+ Y++FI+A   +   GFGTTG    + +EI AF A    +T+ G+  A  GP AWG C+  E      YC  S ++  PC PG +Y+GR  I I  NYNYG  G A+  DL ++P+ +  ++ +  ++  W    P Q  +PS HD   G   P G
Sbjct:   77 FDQMLNHRNDNACQGKGNFYSYNAFISAAGSFP--GFGTTGDITARKREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSSQW--PCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTP-QSPKPSCHDVITGRWQPSG 247          
BLAST of EY660008 vs. ExPASy Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.204e-25
Identity = 62/176 (35.23%), Postives = 89/176 (50.57%), Query Frame = 2
Query:  275 FENFFSKRNTPVAHAVG-FWDYHSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRXAIPIYWNYNYGATGEALRADLXSHPEYIEQNATLCLEAGHWEVDDPGQKSQPSAHDAFVGTGSPPG 799
            F+   + RN         F+ Y++F+TA   +   GFGTTG    + +EI AFLA    +T+ G+  A  GP AWG C+  E      YC  S +  +PC PG +Y+GR  I I  NYNYG  G A+  DL ++P+ +  +  +  ++  W    P Q  +PS HD   G   P G
Sbjct:   81 FDQMLNHRNDNACQGKNNFYSYNAFVTAAGSFP--GFGTTGDITARKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSSQ--WPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSAIWFWMTP-QSPKPSCHDVITGRWQPSG 251          
BLAST of EY660008 vs. ExPASy Swiss-Prot
Match: CHI2_SOLTU (Endochitinase 2 (Fragment) OS=Solanum tuberosum GN=CHTB2 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.204e-25
Identity = 62/176 (35.23%), Postives = 90/176 (51.14%), Query Frame = 2
Query:  275 FENFFSKRNTPVAHAVG-FWDYHSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRXAIPIYWNYNYGATGEALRADLXSHPEYIEQNATLCLEAGHWEVDDPGQKSQPSAHDAFVGTGSPPG 799
            F+   + RN       G F+ Y++FI+A   +   GFGTTG    + +EI AF A    +T+ G+  A  GP AWG C+  E      YC  S ++  PC PG +Y+GR  I I  NYNYG  G A+  DL ++P+ +  ++ +  ++  W    P Q  +PS HD   G   P G
Sbjct:   75 FDQMLNHRNDNACQGKGNFYSYNAFISAAGSFP--GFGTTGDITARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLREQGSPGDYCTPSNQW--PCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSIISFKSAIWFWMTP-QSPKPSCHDVITGRWQPSG 245          
BLAST of EY660008 vs. ExPASy Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 7.137e-25
Identity = 62/176 (35.23%), Postives = 90/176 (51.14%), Query Frame = 2
Query:  275 FENFFSKRNTPVAHAVG-FWDYHSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRXAIPIYWNYNYGATGEALRADLXSHPEYIEQNATLCLEAGHWEVDDPGQKSQPSAHDAFVGTGSPPG 799
            F+   + RN         F+ Y++FI+A   +   GFGTTG    + +EI AFLA    +T+ G+  A  GP AWG C+  E      YC  S ++  PC PG +Y+GR  I I  NYNYG  G A+  DL ++P+ +  ++ +  ++  W    P Q  +PS HD   G   P G
Sbjct:   77 FDQMLNHRNDNACQGKNNFYSYNAFISAAGSFP--GFGTTGDITARKREIAAFLAQTSHETTGGWPSAPDGPYAWGYCFLREQGSPGDYCTPSSQW--PCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTP-QSPKPSCHDVITGRWQPSG 247          
BLAST of EY660008 vs. ExPASy Swiss-Prot
Match: CHI2_PEA (Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 7.137e-25
Identity = 62/183 (33.88%), Postives = 88/183 (48.09%), Query Frame = 2
Query:  245 TISDYFQVYQFENFFSKRNTPVAHAVGFWDYHSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRXAIPIYWNYNYGATGEALRADLXSHPEYIEQNATLCLEAGHWEVDDPGQKSQPSAHDAFVGTGSP 793
            T+S       F N    RN        F+ Y +F++A   +    F   G    K +EI AFL     +T+ G+  A  GP AWG C+  E +PS +YC  S ++  PC  G +YYGR  I I WNYNYG  G A+  DL ++P+ +  +  +  +   W    P Q  +PS HD   G  +P
Sbjct:   67 TLSSLISGDTFNNMLKHRNDNACQGKPFYTYDAFLSAAKAFP--NFANKGDTATKKREIAAFLGQTSHETTGGWPTAPDGPYAWGYCFLREQNPS-TYCQASSEF--PCASGKQYYGRGPIQISWNYNYGQCGRAIGVDLLNNPDLVATDPVISFKTALWFWMTP-QSPKPSCHDVITGGWTP 243          
BLAST of EY660008 vs. ExPASy Swiss-Prot
Match: CHI9_ORYSJ (Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht9 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 9.321e-25
Identity = 58/173 (33.53%), Postives = 87/173 (50.29%), Query Frame = 2
Query:  275 FENFFSKRNTPVAHAVGFWDYHSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRXAIPIYWNYNYGATGEALRADLXSHPEYIEQNATLCLEAGHWEVDDPGQKSQPSAHDAFVGTGSP 793
            FE     RN     A GF+ Y + +TA   +    F  TG    + +E+ AFL     +T+ G+  A  GP +WG C+  E+  + SYC  S ++  PC P  +Y+GR  I + +NYNYG  GEA+  DL ++PE +  +  +  +   W    P Q  +PS HD   G  +P
Sbjct:   95 FEQLLLHRNDAACPARGFYTYDALVTAAAAFPD--FAATGDDEARKREVAAFLGQTSHETTGGWATAPDGPYSWGYCFKEEIGATASYCVPSAEW--PCAPDKKYFGRGPIQLSYNYNYGPAGEAIGEDLLNNPELVASDPVVSFKTALWFWMTP-QSPKPSCHDVITGQWTP 262          
BLAST of EY660008 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 9.321e-25
Identity = 65/182 (35.71%), Postives = 91/182 (50.00%), Query Frame = 2
Query:  248 ISDYFQVYQFENFFSKRNTPVAHAVGFWDYHSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRXAIPIYWNYNYGATGEALRADLXSHPEYIEQNATLCLEAGHWEVDDPGQKSQPSAHDAFVGTGSP 793
            +SD     +F+     RN     A GF+ Y++FI+A  ++    FG TG  L + +EI AFL     +T+ G+  A  GP AWG CY  E++  Q YCD S  Y   C  G +Y GR  I + WNYNYG  G+ L+  L   PE +E +  +  +   W    P Q  +PS H    G  +P
Sbjct:   89 LSDIIPKSKFDALLKFRNDARCPAAGFYTYNAFISAAKEFPD--FGNTGDDLMRKREIAAFLGQTSHETTGGWPDAPCGPYAWGYCYLKEIN-CQPYCDPSSNYQ--CVAGKQYCGRGPIQLSWNYNYGLCGDDLKLPLLQEPELVETDPVISFKTAIWFWMKP-QSPKPSCHAVITGNWTP 264          
BLAST of EY660008 vs. ExPASy Swiss-Prot
Match: CHIT_SOLTU (Endochitinase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.542e-24
Identity = 59/173 (34.10%), Postives = 86/173 (49.71%), Query Frame = 2
Query:  275 FENFFSKRNTPVAHAVGFWDYHSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRXAIPIYWNYNYGATGEALRADLXSHPEYIEQNATLCLEAGHWEVDDPGQKSQPSAHDAFVGTGSP 793
            F+     RN        F+ Y++FI A   +   GFGT+G    + +EI AF A    +T+ G+  A  GP AWG C+  E      YC  S ++  PC PG +Y+GR  I I  NYNYG  G A+  DL ++P+ +  +  +  +   W    P Q  +PS HD  +G  +P
Sbjct:   88 FDQMLKHRNENSCQGKNFYSYNAFINAARSFP--GFGTSGDINARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLRERGNPGDYCPPSSQW--PCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKTALWFWMTP-QSPKPSCHDVIIGRWNP 255          
BLAST of EY660008 vs. ExPASy Swiss-Prot
Match: CHI4_SOLTU (Endochitinase 4 (Fragment) OS=Solanum tuberosum GN=CHTB4 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 6.042e-24
Identity = 60/174 (34.48%), Postives = 86/174 (49.43%), Query Frame = 2
Query:  275 FENFFSKRNTPVAHAVG-FWDYHSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRXAIPIYWNYNYGATGEALRADLXSHPEYIEQNATLCLEAGHWEVDDPGQKSQPSAHDAFVGTGSP 793
            F+     RN         F+ Y++FI A   +   GFGTTG    + +EI AF A    +T+ G+  A  GP AWG C+  E      YC  S +  +PC PG +Y+GR  I I  NYNYG  G A+  DL ++P+ +  +  +  ++  W    P Q  +PS HD  +G   P
Sbjct:   87 FDQMLKHRNDNACQGKNNFYSYNAFINAARSFG--GFGTTGDTTARKREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSGQ--WPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSAIWFWMTP-QSPKPSCHDVIIGRWQP 255          
The following BLAST results are available for this feature:
BLAST of EY660008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
CHIC_SECCE1.878e-2532.97Basic endochitinase C OS=Secale cereale GN=rscc PE... [more]
CHI1_SOLTU2.453e-2535.23Endochitinase 1 (Fragment) OS=Solanum tuberosum GN... [more]
CHIC_SOLLC3.204e-2535.23Basic 30 kDa endochitinase OS=Solanum lycopersicum... [more]
CHI2_SOLTU3.204e-2535.23Endochitinase 2 (Fragment) OS=Solanum tuberosum GN... [more]
CHI3_SOLTU7.137e-2535.23Endochitinase 3 (Fragment) OS=Solanum tuberosum GN... [more]
CHI2_PEA7.137e-2533.88Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=... [more]
CHI9_ORYSJ9.321e-2533.53Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI6_POPTR9.321e-2535.71Acidic endochitinase WIN6 OS=Populus trichocarpa G... [more]
CHIT_SOLTU3.542e-2434.10Endochitinase OS=Solanum tuberosum PE=2 SV=1[more]
CHI4_SOLTU6.042e-2434.48Endochitinase 4 (Fragment) OS=Solanum tuberosum GN... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-017-E06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660008 ID=EY660008; Name=EY660008; organism=Citrus sinensis; type=EST; length=915bp
TCAACAACGCGCGCGTCCGCCAAGTGATTTCCTAAAAACAGGTAGATCTG
GTGAGAACGAGAAAATAAAGATGAAGAATGGCATTGTGCCAATGACACTG
ACAGTGGCACTAGTACTGGCACTGGCAGTGAGTTTGGCAAATGGAGATGA
ATCAGAGAAGGTGATAGTGAAGAAGGTGAAGGGGAAAAAAGTTTGCATAA
AAGGGTGGGAGTGCCCAACATGGTCGAAATTCTGCTGTAACGAGACGATA
TCAGACTATTTCCAGGTTTACCAGTTTGAGAATTTCTTCTCGAAAAGGAA
CACGCCGGTGGCACATGCCGTGGGCTTCTGGGATTATCACTCTTTCATTA
CTGCCACCGTCAAATATCAGCCCCTCGGCTTCGGTACCACCGGTACTAAG
CTTGATAAGATGAAGGAGATTTGCGCTTTTCTTGCCCACGTCGGCTGCAA
GACCTCTTGTGGATATGGGGTGGCCACTGGAGGACCATTGGCCTGGGGAC
TTTGCTACAACCATGAAATGAGCCCCAGTCAGTCATATTGTGATGATTCC
TACAAATACACATATCCCTGCACCCCTGGAGCTGAGTACTACGGCCGANG
TGCTATACCTATATACTGGAACTATAACTATGGAGCTACTGGGGAAGCAT
TGAGGGCGGATCTGNTGAGTCATCCTGAATACATTGAGCAGAATGCTACC
CTTTGCCTTGAGGCTGGNCATTGGGAAGTGGATGACCCCGGNCAGAAATC
CCAGCCTTCAGCCCATGATGCCTTTGTTGGCACTGGGAGCCCACCAGGAT
GATACTTTGTCCAACGGGGACCTACTTTGGGACACAATGATTATTCTCTA
TGGGGAAAGCGTATGCGGCCAGGGTGATTTTGATGCTATTGACACATTGC
CCCTCATACCTGATT
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