EY660008

Overview
NameEY660008
Unique NameEY660008
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length915
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660008 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 7.891e-24
Identity = 60/174 (34.48%), Postives = 90/174 (51.72%), Query Frame = 2
Query:  275 FENFFSKRNTPVAHAVGFWDYHSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQ-SYCDDSYKYTYPCTPGAEYYGRXAIPIYWNYNYGATGEALRADLXSHPEYIEQNATLCLEAGHWEVDDPGQKSQPSAHDAFVGTGSP 793
            F+     RN     A GF+ Y +F+ A   Y    F TTG      +E+ AFLA    +T+ G+  A  GP +WG C+  E + +  +YC+   K  +PC  G +YYGR  I I +NYNYG  G+A+ +DL ++P+ +  +AT+  +   W    P Q  +PS H    G  +P
Sbjct:   85 FDQMLLHRNDQACAAKGFYTYDAFVAAANAYPD--FATTGDADTCKREVAAFLAQTSHETTGGWPTAPDGPYSWGYCFKEENNGNAPTYCEP--KPEWPCAAGKKYYGRGPIQITYNYNYGPAGQAIGSDLLNNPDLVASDATVSFKTAFWFWMTP-QSPKPSCHAVITGQWTP 253          
BLAST of EY660008 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.891e-24
Identity = 59/177 (33.33%), Postives = 90/177 (50.85%), Query Frame = 2
Query:  275 FENFFSKRNTPVAHAVGFWDYHSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPS--QSYCDDSYKYTYPCTPGAEYYGRXAIPIYWNYNYGATGEALRADLXSHPEYIEQNATLCLEAGHWEVDDPGQKSQPSAHDAFVGTGSPPG 799
            F+     RN     A  F+ Y +F+ A   +    F TTG    + +E+ AFLA    +T+ G+  A  GP +WG C+  E + +    YC  S ++  PC  G +YYGR  I I +NYNYG  G+A+ ++L S+P+ +  +AT+  +   W    P Q  +PS H    G  +P G
Sbjct:   88 FDQMLLHRNDAACPAKNFYTYDAFVAAANAFP--SFATTGDAATRKREVAAFLAQTSHETTGGWATAPDGPYSWGYCFKEENNGNVGSDYCVQSSQW--PCAAGKKYYGRGPIQISYNYNYGPAGQAIGSNLLSNPDLVASDATVSFKTAFWFWMTP-QSPKPSCHAVMTGQWTPNG 259          
BLAST of EY660008 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.315e-22
Identity = 58/174 (33.33%), Postives = 82/174 (47.13%), Query Frame = 2
Query:  272 QFENFFSKRNTPVAHAVGFWDYHSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRXAIPIYWNYNYGATGEALRADLXSHPEYIEQNATLCLEAGHWEVDDPGQKSQPSAHDAFVGTGSP 793
            QFE     R+     A GF+ Y +F+ A   +    F  TG    + +E+ AFLA     TS       GGP +WG CY      +  +C  + ++  PC PG  Y+ R  + I +NYNYGA GEA+ ADL  +PE +  + T+  +   W        SQPS H    G  +P
Sbjct:  105 QFERMLPHRDDAACPARGFYAYRAFVAAAGAFP--AFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCYKEVKGATSDFCVPNARW--PCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTP 267          
BLAST of EY660008 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.315e-22
Identity = 58/174 (33.33%), Postives = 82/174 (47.13%), Query Frame = 2
Query:  272 QFENFFSKRNTPVAHAVGFWDYHSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRXAIPIYWNYNYGATGEALRADLXSHPEYIEQNATLCLEAGHWEVDDPGQKSQPSAHDAFVGTGSP 793
            QFE     R+     A GF+ Y +F+ A   +    F  TG    + +E+ AFLA     TS       GGP +WG CY      +  +C  + ++  PC PG  Y+ R  + I +NYNYGA GEA+ ADL  +PE +  + T+  +   W        SQPS H    G  +P
Sbjct:  105 QFERMLPHRDDAACPARGFYAYRAFVAAAGAFP--AFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCYKEVKGATSDFCVPNARW--PCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTP 267          
BLAST of EY660008 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 3.315e-22
Identity = 59/176 (33.52%), Postives = 85/176 (48.30%), Query Frame = 2
Query:  275 FENFFSKRNTPVAHAVGFWDYHSFITATVKYQPLGFGTTGTKLDKMK-EICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEM--SPSQSYCDDSYKYTYPCTPGAEYYGRXAIPIYWNYNYGATGEALRADLXSHPEYIEQNATLCLEAGHWEVDDPGQKSQPSAHDAFVGTGSP 793
            F+     RN     A  F+ Y +F+ A   +   GF   G   D  K E+ AFLA    +T+ G+  A  GP AWG C+  E   +    YC  S ++  PC  G +YYGR  I + +N+NYG  G+A+ ADL   P+ +  +AT+  +   W    P Q  +PS H    G  +P
Sbjct:   90 FDQMLLHRNDAACPASNFYTYDAFVAAASAFP--GFAAAGGDADTNKREVAAFLAQTSHETTGGWATAPDGPYAWGYCFKEENGGAAGPDYCQQSAQW--PCAAGKKYYGRGPIQLSYNFNYGPAGQAIGADLLGDPDLVASDATVSFDTAFWFWMTP-QSPKPSCHAVATGQWTP 260          
BLAST of EY660008 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3)

HSP 1 Score: 89.7373 bits (221), Expect = 2.459e-17
Identity = 54/173 (31.21%), Postives = 86/173 (49.71%), Query Frame = 2
Query:  275 FENFFSKRNTPVAHAVGFWDYHSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQS-YCDDSYKYTYPCTPGAEYYGRXAIPIYWNYNYGATGEALRADLXSHPEYIEQNATLCLEAGHWEVDDPGQKSQPSAHDAFVGTGS 790
            F+  FS R      + GF+ YHSF+ A   +    FGT G    + +E+ AFLAH+   TS G       P AWGLC+ +  + +++ +C  S    +PC  G +Y  R  I +  N+NYG  G+A+  DL  +P+ +E++  +  +   W        ++PS HD  +   S
Sbjct:  139 FDQMFSHRKD--CPSQGFYSYHSFLVAAESFP--AFGTIGDVATRKREVAAFLAHISQATS-GERSDVENPHAWGLCHINTTTVTENDFCTSS---DWPCAAGKKYSPRGPIQLTHNFNYGLAGQAIGEDLIQNPDLVEKDPIISFKTALWFWMSQ-HDNKPSCHDIVLNANS 302          
BLAST of EY660008 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.142e-14
Identity = 50/155 (32.26%), Postives = 74/155 (47.74%), Query Frame = 2
Query:  317 AVGFWDYHSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMS-PSQSYCDDSYKYTYPCTPGAEYYGRXAIPIYWNYNYGATGEALRADLXSHPEYIEQNATLCLEAGHWEVDDPGQKSQPSAHDAFV 778
            A GF+   +F+TA   Y    FG TG+  D  +EI AF AH   +T                CY  E+  PS++YCD++    +PC  G  YYGR  + I WN+NYG  G+++  D    P+ + ++  L  +   W   +       + HDAFV
Sbjct:   90 AKGFYTRDAFLTAAGGYP--SFGRTGSVDDSKREIAAFFAHANHETI-------------KFCYIEEIDGPSKNYCDET-STQWPCMAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSPVLAFQTALWYWTN-------NVHDAFV 221          
BLAST of EY660008 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.142e-14
Identity = 51/175 (29.14%), Postives = 74/175 (42.29%), Query Frame = 2
Query:  275 FENFFSKRNTPVAHAVGFWDYHSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRXAIPIYWNYNYGATGEALRADLXSHPEYIEQNATLCLEAGHWEVDDPGQKSQPSAHDAFVGTGSPPG 799
            FE+  S R         F+ Y +FI A   +    FGTTG    + +E+ AF      +T+ G+  A  GP AWG C  +E++PS                   YYGR  I +   YNY   G+AL  DL ++P+ +  +  +      W      Q  +PS HD      +P G
Sbjct:   36 FESMLSHRGDQGCQGA-FYTYDAFIKAAGDFPR--FGTTGNDETRRRELAAFFGQTSHETTGGWATAPDGPFAWGYCRVNEITPSD----------------PPYYGRGPIQLTHKYNYQLAGDALGLDLVNNPDLVSSDPVVAFRTAIW-FWMTAQSPKPSCHDVITNQWTPSG 190          
BLAST of EY660008 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.323e-14
Identity = 53/173 (30.64%), Postives = 77/173 (44.51%), Query Frame = 2
Query:  275 FENFFSKRNTPVAHAVGFWDYHSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRXAIPIYWNYNYGATGEALRADLXSHPEYIEQNATLCLEAGHWEVDDPGQKSQPSAHDAFVGTGSP 793
            F+     RN     AV F+ Y +FI A   +   GFGTTG    + KEI AF      +T+ G  ++  GP A G C+  E +                  G  YYGR  I +    NY   G+A+  DL ++P+ +  +AT+  +   W    P Q ++PS HD   G  +P
Sbjct:   35 FDQMLKNRNDARCFAVRFYTYDAFIAAANSFP--GFGTTGDDTARKKEIAAFFGQTSHETTGGT-LSPDGPYAGGYCFLREGNQM----------------GNGYYGRGPIQLTGQSNYDLAGKAIEQDLVNNPDLVATDATVSFKTAIWFWMTP-QGNKPSCHDVITGRWTP 187          
BLAST of EY660008 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.323e-14
Identity = 46/134 (34.33%), Postives = 65/134 (48.51%), Query Frame = 2
Query:  326 FWDYHSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMS-PSQSYCDDSYKYTYPCTPGAEYYGRXAIPIYWNYNYGATGEALRADLXSHPEYIEQNATLCLEAGHW 724
            F+   SF+ A   Y   GF    T  D  +EI AF AHV  +T               +CY +E++  S  YCD + K  +PC PG +YYGR  + I WNYNYG  G+ +  D    P+ + Q+ T+  +   W
Sbjct:  112 FYTRQSFLNAAHSYS--GFARDRTNDDSKREIAAFFAHVTHETG-------------HMCYINEINGASMDYCDKNNKQ-WPCQPGKKYYGRGPLQISWNYNYGPAGQNIGFDGLRDPDRVAQDPTISFKTALW 229          
The following BLAST results are available for this feature:
BLAST of EY660008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
CHI3_ORYSJ7.891e-2434.48Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI1_ORYSJ7.891e-2433.33Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI7_ORYSJ3.315e-2233.33Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI7_ORYSI3.315e-2233.33Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 ... [more]
CHI12_ORYSJ3.315e-2233.52Chitinase 12 OS=Oryza sativa subsp. japonica GN=Ch... [more]
AGI_URTDI2.459e-1731.21Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE... [more]
CHI6_ORYSJ1.142e-1432.26Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI11_ORYSJ1.142e-1429.14Chitinase 11 OS=Oryza sativa subsp. japonica GN=Ch... [more]
CHIT_PETHY3.323e-1430.64Acidic endochitinase OS=Petunia hybrida PE=2 SV=1[more]
CHI5_ORYSJ3.323e-1434.33Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-017-E06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660008 ID=EY660008; Name=EY660008; organism=Citrus sinensis; type=EST; length=915bp
TCAACAACGCGCGCGTCCGCCAAGTGATTTCCTAAAAACAGGTAGATCTG
GTGAGAACGAGAAAATAAAGATGAAGAATGGCATTGTGCCAATGACACTG
ACAGTGGCACTAGTACTGGCACTGGCAGTGAGTTTGGCAAATGGAGATGA
ATCAGAGAAGGTGATAGTGAAGAAGGTGAAGGGGAAAAAAGTTTGCATAA
AAGGGTGGGAGTGCCCAACATGGTCGAAATTCTGCTGTAACGAGACGATA
TCAGACTATTTCCAGGTTTACCAGTTTGAGAATTTCTTCTCGAAAAGGAA
CACGCCGGTGGCACATGCCGTGGGCTTCTGGGATTATCACTCTTTCATTA
CTGCCACCGTCAAATATCAGCCCCTCGGCTTCGGTACCACCGGTACTAAG
CTTGATAAGATGAAGGAGATTTGCGCTTTTCTTGCCCACGTCGGCTGCAA
GACCTCTTGTGGATATGGGGTGGCCACTGGAGGACCATTGGCCTGGGGAC
TTTGCTACAACCATGAAATGAGCCCCAGTCAGTCATATTGTGATGATTCC
TACAAATACACATATCCCTGCACCCCTGGAGCTGAGTACTACGGCCGANG
TGCTATACCTATATACTGGAACTATAACTATGGAGCTACTGGGGAAGCAT
TGAGGGCGGATCTGNTGAGTCATCCTGAATACATTGAGCAGAATGCTACC
CTTTGCCTTGAGGCTGGNCATTGGGAAGTGGATGACCCCGGNCAGAAATC
CCAGCCTTCAGCCCATGATGCCTTTGTTGGCACTGGGAGCCCACCAGGAT
GATACTTTGTCCAACGGGGACCTACTTTGGGACACAATGATTATTCTCTA
TGGGGAAAGCGTATGCGGCCAGGGTGATTTTGATGCTATTGACACATTGC
CCCTCATACCTGATT
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