EY660008

Overview
NameEY660008
Unique NameEY660008
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length915
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660008 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.668e-14
Identity = 43/133 (32.33%), Postives = 66/133 (49.62%), Query Frame = 2
Query:  326 FWDYHSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRXAIPIYWNYNYGATGEALRADLXSHPEYIEQNATLCLEAGHW 724
            F+   +F++A   Y   GF   GT+++  +EI AF AHV  +T                CY  E++ S +YCD S +  +PC  G +YYGR  + I WNYNYG  G  +  +  + P  + Q+A +  +   W
Sbjct:  105 FYTRSAFLSAVNAYP--GFAHGGTEVEGKREIAAFFAHVTHETG-------------HFCYISEINKSNAYCDASNRQ-WPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALW 221          
BLAST of EY660008 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 9.668e-14
Identity = 45/134 (33.58%), Postives = 65/134 (48.51%), Query Frame = 2
Query:  326 FWDYHSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMS-PSQSYCDDSYKYTYPCTPGAEYYGRXAIPIYWNYNYGATGEALRADLXSHPEYIEQNATLCLEAGHW 724
            F+   SF+ A   Y   GF    T  D  +EI AF AHV  +T               +CY +E++  +  YCD S K  +PC PG +YYGR  + I WN+NYG  G+ +  D    P+ + Q+ T+  +   W
Sbjct:  109 FYTRQSFLNAARSYS--GFANDRTNDDSKREIAAFFAHVTHETG-------------HMCYINEINGANMDYCDKSNKQ-WPCQPGKKYYGRGPLQISWNFNYGPAGKNIGFDGLRDPDKVAQDPTISFKTALW 226          
BLAST of EY660008 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.263e-13
Identity = 51/173 (29.48%), Postives = 76/173 (43.93%), Query Frame = 2
Query:  275 FENFFSKRNTPVAHAVGFWDYHSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRXAIPIYWNYNYGATGEALRADLXSHPEYIEQNATLCLEAGHWEVDDPGQKSQPSAHDAFVGTGSP 793
            F      RN     A GF+ Y +FI A   +   GFGTTG    + KEI AF      +T+ G  ++  GP A G C+  E +                  G+ +YGR  I +    NY   G+A+  DL ++P+ +  +AT+  +   W      Q ++PS HD   G  +P
Sbjct:   28 FNEMLKNRNDDRCPAKGFYTYDAFIAAANSFP--GFGTTGDDTARKKEIAAFFGQTSHETTGG-SLSADGPFAGGYCFVREGNQM----------------GSGFYGRGPIQLTGQSNYDLAGQAIGQDLVNNPDLVATDATVSFKTAIW-FWMTAQGNKPSCHDVITGQWTP 180          
BLAST of EY660008 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.649e-13
Identity = 43/133 (32.33%), Postives = 65/133 (48.87%), Query Frame = 2
Query:  326 FWDYHSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRXAIPIYWNYNYGATGEALRADLXSHPEYIEQNATLCLEAGHW 724
            F+   +F++A   Y   GF   G+++   +EI AF AH   +T                CY  E++ S +YCD + K  +PC  G +YYGR  + I WNYNYG  G A+  D    P  + ++A +  +A  W
Sbjct:   94 FYTRSAFLSAVKGYP--GFAHGGSQVQGKREIAAFFAHATHETG-------------HFCYISEINKSNAYCDPT-KRQWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALW 210          
BLAST of EY660008 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.813e-13
Identity = 48/157 (30.57%), Postives = 72/157 (45.86%), Query Frame = 2
Query:  323 GFWDYHSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRXAIPIYWNYNYGATGEALRADLXSHPEYIEQNATLCLEAGHWEVDDPGQKSQPSAHDAFVGTGSP 793
            GF+ Y +FI A   +    F TTG+   + +E+ AFLA    +T+ G+  A  GP                         Y     ++Y+GR  I I +NYNYGA G+A+  DL  +P+ +  + T+  +   W    P Q  +PS+HD   G  SP
Sbjct:   18 GFYTYDAFIAAAKSFP--AFATTGSTDVRKREVAAFLAQTSHETTGGWPTAPDGP-------------------------YELGSTSDYFGRGPIQISYNYNYGAAGKAIGVDLLRNPDLVTSDNTVEFKTALWFWMTP-QSPKPSSHDVITGRWSP 146          
BLAST of EY660008 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.267e-13
Identity = 50/173 (28.90%), Postives = 75/173 (43.35%), Query Frame = 2
Query:  275 FENFFSKRNTPVAHAVGFWDYHSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRXAIPIYWNYNYGATGEALRADLXSHPEYIEQNATLCLEAGHWEVDDPGQKSQPSAHDAFVGTGSP 793
            F      RN     A GF+ Y +FI A   +   GFGT+G    + KEI AF      +T+   G  +  P   G C+  +   S                   YYGR  I +    NY   G A+R DL ++P+ +  +AT+  +   W    P Q ++PS+HD  +G+ +P
Sbjct:   36 FNEMLKNRNDGRCPANGFYTYDAFIAAANSFP--GFGTSGDDTARRKEIAAFFGQTSHETT--GGSLSAEPFTGGYCFVRQNDQSD-----------------RYYGRGPIQLTNQNNYEKAGNAIRQDLVNNPDLVATDATISFKTAIWFWMTP-QDNKPSSHDVIIGSWTP 186          
BLAST of EY660008 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.396e-12
Identity = 32/75 (42.67%), Postives = 45/75 (60.00%), Query Frame = 2
Query:  503 CYNHEMS-PSQSYCDDSYKYTYPCTPGAEYYGRXAIPIYWNYNYGATGEALRADLXSHPEYIEQNATLCLEAGHW 724
            CY  E++  S+ YCD++ +  YPC PG  Y+GR  I + WNYNYGA G++L  +L   PE +  N T+    G W
Sbjct:  137 CYIEEINGASRDYCDENNRQ-YPCAPGKGYFGRGPIQLSWNYNYGACGQSLNLNLLGQPELVSSNPTVAFRTGLW 210          
BLAST of EY660008 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.110e-12
Identity = 37/117 (31.62%), Postives = 53/117 (45.30%), Query Frame = 2
Query:  380 FGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPS--QSYCDDSYKYTYPCTPGAEYYGRXAIPIYWNYNYGATGEALRADLXSHPEYIEQNATLCLEAGHW 724
            FG  G+  D  +EI AF AH+  +T+              LC+  E       +YCD      YPC  G +YYGR  + + WNYNY   G+A+  D   +PE +  +     +A  W
Sbjct:  126 FGNEGSSDDNKREIAAFFAHISHETT-------------NLCHIEERDGDVGDAYCDQDKAAQYPCAAGKKYYGRGPLQLSWNYNYALAGQAIGFDGLGNPEKVATDVNTSFKAAMW 229          
BLAST of EY660008 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.049e-12
Identity = 49/173 (28.32%), Postives = 73/173 (42.20%), Query Frame = 2
Query:  275 FENFFSKRNTPVAHAVGFWDYHSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRXAIPIYWNYNYGATGEALRADLXSHPEYIEQNATLCLEAGHWEVDDPGQKSQPSAHDAFVGTGSP 793
            F      RN     A GF+ Y +FI A   +   GFGTTG    + KEI AF      +T+   G  +  P   G C+  +   S                   YYGR  I +    NY   G A+  +L ++P+ +  +AT+  +   W    P Q ++PS+HD  +G  +P
Sbjct:   36 FNEMLKNRNDGRCPANGFYTYDAFIAAANSFP--GFGTTGDDTARRKEIAAFFGQTSHETT--GGSLSAEPFTGGYCFVRQNDQSD-----------------RYYGRGPIQLTNRNNYEKAGTAIGQELVNNPDLVATDATISFKTAIWFWMTP-QDNKPSSHDVIIGRWTP 186          
BLAST of EY660008 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.182e-11
Identity = 42/134 (31.34%), Postives = 64/134 (47.76%), Query Frame = 2
Query:  326 FWDYHSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSP-SQSYCDDSYKYTYPCTPGAEYYGRXAIPIYWNYNYGATGEALRADLXSHPEYIEQNATLCLEAGHW 724
            F+   +F+ A   Y   GFGT  T  D+ +EI A+ AHV  +T               LCY  E    + +YC +S +Y  PC P  EY+GR  + + WNYNY   G+ L  D  + P+ + ++  +  +   W
Sbjct:   71 FYTRSNFLEAVSAYP--GFGTKCTDEDRKREIAAYFAHVTHETG-------------HLCYIEERDGHANNYCQESQQY--PCNPNKEYFGRGPMQLSWNYNYIDAGKELHFDGLNDPDIVGRDPIISFKTSLW 187          
The following BLAST results are available for this feature:
BLAST of EY660008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
CHIA_MAIZE9.668e-1432.33Endochitinase A OS=Zea mays PE=1 SV=1[more]
CHI4_ORYSJ9.668e-1433.58Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHIB_SOLLC1.263e-1329.48Acidic 27 kDa endochitinase OS=Solanum lycopersicu... [more]
CHIB_MAIZE1.649e-1332.33Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1[more]
CHIT_AVESA2.813e-1330.57Endochitinase (Fragments) OS=Avena sativa PE=1 SV=... [more]
CHIP_TOBAC6.267e-1328.90Acidic endochitinase P OS=Nicotiana tabacum PE=1 S... [more]
CHI4_BRANA1.396e-1242.67Basic endochitinase CHB4 OS=Brassica napus PE=1 SV... [more]
CHIP_BETVU3.110e-1231.62Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 P... [more]
CHIQ_TOBAC9.049e-1228.32Acidic endochitinase Q OS=Nicotiana tabacum PE=1 S... [more]
CHIT_DIOJA1.182e-1131.34Acidic endochitinase OS=Dioscorea japonica PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-017-E06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660008 ID=EY660008; Name=EY660008; organism=Citrus sinensis; type=EST; length=915bp
TCAACAACGCGCGCGTCCGCCAAGTGATTTCCTAAAAACAGGTAGATCTG
GTGAGAACGAGAAAATAAAGATGAAGAATGGCATTGTGCCAATGACACTG
ACAGTGGCACTAGTACTGGCACTGGCAGTGAGTTTGGCAAATGGAGATGA
ATCAGAGAAGGTGATAGTGAAGAAGGTGAAGGGGAAAAAAGTTTGCATAA
AAGGGTGGGAGTGCCCAACATGGTCGAAATTCTGCTGTAACGAGACGATA
TCAGACTATTTCCAGGTTTACCAGTTTGAGAATTTCTTCTCGAAAAGGAA
CACGCCGGTGGCACATGCCGTGGGCTTCTGGGATTATCACTCTTTCATTA
CTGCCACCGTCAAATATCAGCCCCTCGGCTTCGGTACCACCGGTACTAAG
CTTGATAAGATGAAGGAGATTTGCGCTTTTCTTGCCCACGTCGGCTGCAA
GACCTCTTGTGGATATGGGGTGGCCACTGGAGGACCATTGGCCTGGGGAC
TTTGCTACAACCATGAAATGAGCCCCAGTCAGTCATATTGTGATGATTCC
TACAAATACACATATCCCTGCACCCCTGGAGCTGAGTACTACGGCCGANG
TGCTATACCTATATACTGGAACTATAACTATGGAGCTACTGGGGAAGCAT
TGAGGGCGGATCTGNTGAGTCATCCTGAATACATTGAGCAGAATGCTACC
CTTTGCCTTGAGGCTGGNCATTGGGAAGTGGATGACCCCGGNCAGAAATC
CCAGCCTTCAGCCCATGATGCCTTTGTTGGCACTGGGAGCCCACCAGGAT
GATACTTTGTCCAACGGGGACCTACTTTGGGACACAATGATTATTCTCTA
TGGGGAAAGCGTATGCGGCCAGGGTGATTTTGATGCTATTGACACATTGC
CCCTCATACCTGATT
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