EY660003

Overview
NameEY660003
Unique NameEY660003
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length924
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY660003 vs. ExPASy Swiss-Prot
Match: QKI_FELCA (Protein quaking OS=Felis catus GN=QKI PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.977e-28
Identity = 63/129 (48.84%), Postives = 87/129 (67.44%), Query Frame = 1 
Query:  346 PVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPDGYINSRLDHAVAILENLLKPVDESLDHLQKXTLRELAMLNGYSRE 732
            P+V+   +L VPV +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D  KEE+ + KP +EHLNE LHVL+  E        +L  AV  ++ LL P  E  D L+K  L ELA+LNG  R+
Sbjct:   78 PIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRD 206
[Close]
BLAST of EY660003 vs. ExPASy Swiss-Prot
Match: QKI_CANFA (Protein quaking OS=Canis familiaris GN=QKI PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.977e-28
Identity = 63/129 (48.84%), Postives = 87/129 (67.44%), Query Frame = 1 
Query:  346 PVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPDGYINSRLDHAVAILENLLKPVDESLDHLQKXTLRELAMLNGYSRE 732
            P+V+   +L VPV +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D  KEE+ + KP +EHLNE LHVL+  E        +L  AV  ++ LL P  E  D L+K  L ELA+LNG  R+
Sbjct:   78 PIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRD 206
[Close]
BLAST of EY660003 vs. ExPASy Swiss-Prot
Match: QKI_BOVIN (Protein quaking OS=Bos taurus GN=QKI PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.977e-28
Identity = 63/129 (48.84%), Postives = 87/129 (67.44%), Query Frame = 1 
Query:  346 PVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPDGYINSRLDHAVAILENLLKPVDESLDHLQKXTLRELAMLNGYSRE 732
            P+V+   +L VPV +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D  KEE+ + KP +EHLNE LHVL+  E        +L  AV  ++ LL P  E  D L+K  L ELA+LNG  R+
Sbjct:   78 PIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRD 206
[Close]
BLAST of EY660003 vs. ExPASy Swiss-Prot
Match: QKIB_XENLA (Protein quaking-B OS=Xenopus laevis GN=qki-B PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.977e-28
Identity = 63/129 (48.84%), Postives = 87/129 (67.44%), Query Frame = 1 
Query:  346 PVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPDGYINSRLDHAVAILENLLKPVDESLDHLQKXTLRELAMLNGYSRE 732
            P+V+   +L VPV +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D  KEE+ + KP +EHLNE LHVL+  E        +L  AV  ++ LL P  E  D L+K  L ELA+LNG  R+
Sbjct:   79 PIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRD 207
[Close]
BLAST of EY660003 vs. ExPASy Swiss-Prot
Match: QKIA_XENLA (Protein quaking-A OS=Xenopus laevis GN=qki-A PE=1 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 6.977e-28
Identity = 63/129 (48.84%), Postives = 87/129 (67.44%), Query Frame = 1 
Query:  346 PVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPDGYINSRLDHAVAILENLLKPVDESLDHLQKXTLRELAMLNGYSRE 732
            P+V+   +L VPV +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D  KEE+ + KP +EHLNE LHVL+  E        +L  AV  ++ LL P  E  D L+K  L ELA+LNG  R+
Sbjct:   79 PIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAELKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRD 207
[Close]
BLAST of EY660003 vs. ExPASy Swiss-Prot
Match: QKI_CHICK (Protein quaking OS=Gallus gallus GN=QKI PE=2 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 9.112e-28
Identity = 63/129 (48.84%), Postives = 87/129 (67.44%), Query Frame = 1 
Query:  346 PVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPDGYINSRLDHAVAILENLLKPVDESLDHLQKXTLRELAMLNGYSRE 732
            P+V+   +L VPV +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D  KEE+ + KP +EHLNE LHVL+  E        +L  AV  ++ LL P  E  D L+K  L ELA+LNG  R+
Sbjct:   78 PIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLIPAAEGEDSLKKMQLMELAILNGTYRD 206
[Close]
BLAST of EY660003 vs. ExPASy Swiss-Prot
Match: QKIB_DANRE (Protein quaking-B OS=Danio rerio GN=qkib PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 2.030e-27
Identity = 62/129 (48.06%), Postives = 86/129 (66.67%), Query Frame = 1 
Query:  346 PVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPDGYINSRLDHAVAILENLLKPVDESLDHLQKXTLRELAMLNGYSRE 732
            P+ +   +L VPV +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D  KEE+ + KP +EHLNE LHVL+  E        +L  AV  ++ LL P  E  D L+K  L ELA+LNG  R+
Sbjct:   78 PIAQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDSQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRD 206
[Close]
BLAST of EY660003 vs. ExPASy Swiss-Prot
Match: QKIA_DANRE (Protein quaking-A OS=Danio rerio GN=qkia PE=2 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 3.463e-27
Identity = 62/132 (46.97%), Postives = 87/132 (65.91%), Query Frame = 1 
Query:  337 PTTPVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPDGYINSRLDHAVAILENLLKPVDESLDHLQKXTLRELAMLNGYSRE 732
            P  P+V    +L VPV +YP++NFVGRILGPRG + K++EA T C++ +RGR S++D  KEE+ + KP +EHLNE LHVL+  E        ++  AV  ++ LL P  E  D+L+K  L ELA+LNG  R+
Sbjct:   75 PVGPIVHLQEKLFVPVKEYPDYNFVGRILGPRGLTAKQLEAETGCKIMVRGRSSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDTQTRAEIKMRRAVEEVKKLLVPAAEGEDNLKKMQLMELAILNGTYRD 206
[Close]
BLAST of EY660003 vs. ExPASy Swiss-Prot
Match: HOW_DROME (Protein held out wings OS=Drosophila melanogaster GN=how PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 9.429e-25
Identity = 58/132 (43.94%), Postives = 86/132 (65.15%), Query Frame = 1 
Query:  337 PTTPVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPDGYINSRLDHAVAILENLLKPVDESLDHLQKXTLRELAMLNGYSRE 732
            P   VV    ++ VPV ++P+FNFVGRILGPRG + K++E  T C++ +RG+GS++D  KE+  + KP +EHL++ LHVL+  E  +     +L  AVA ++ LL P  E  D L+K  L ELA++NG  R+
Sbjct:  130 PEGSVVTMNEKVYVPVREHPDFNFVGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKKKEDANRGKPNWEHLSDDLHVLITVEDTENRATVKLAQAVAEVQKLLVPQAEGEDELKKRQLMELAIINGTYRD 261
[Close]
BLAST of EY660003 vs. ExPASy Swiss-Prot
Match: GLD1_CAEEL (Female germline-specific tumor suppressor gld-1 OS=Caenorhabditis elegans GN=gld-1 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 3.033e-23
Identity = 52/131 (39.69%), Postives = 84/131 (64.12%), Query Frame = 1 
Query:  337 PTTPVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPDGYINSRLDHAVAILENLLKPVDESLDHLQKXTLRELAMLNGYSR 729
            P   ++    ++ VP ++YP++NFVGRILGPRG + K++E  T C++ +RG+GS++D  KE   + K  +EHL + LHVLV+ E  +  ++ +L  A+  ++ LL P  E  D L++  L ELA++NG  R
Sbjct:  198 PAGDMISITEKIYVPKNEYPDYNFVGRILGPRGMTAKQLEQDTGCKIMVRGKGSMRDKSKESAHRGKANWEHLEDDLHVLVQCEDTENRVHIKLQAALEQVKKLLIPAPEGTDELKRKQLMELAIINGTYR 328
The following BLAST results are available for this feature:
BLAST of EY660003 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
QKI_FELCA6.977e-2848.84Protein quaking OS=Felis catus GN=QKI PE=2 SV=1[more]
QKI_CANFA6.977e-2848.84Protein quaking OS=Canis familiaris GN=QKI PE=2 SV... [more]
QKI_BOVIN6.977e-2848.84Protein quaking OS=Bos taurus GN=QKI PE=2 SV=1[more]
QKIB_XENLA6.977e-2848.84Protein quaking-B OS=Xenopus laevis GN=qki-B PE=1 ... [more]
QKIA_XENLA6.977e-2848.84Protein quaking-A OS=Xenopus laevis GN=qki-A PE=1 ... [more]
QKI_CHICK9.112e-2848.84Protein quaking OS=Gallus gallus GN=QKI PE=2 SV=2[more]
QKIB_DANRE2.030e-2748.06Protein quaking-B OS=Danio rerio GN=qkib PE=2 SV=1[more]
QKIA_DANRE3.463e-2746.97Protein quaking-A OS=Danio rerio GN=qkia PE=2 SV=2[more]
HOW_DROME9.429e-2543.94Protein held out wings OS=Drosophila melanogaster ... [more]
GLD1_CAEEL3.033e-2339.69Female germline-specific tumor suppressor gld-1 OS... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-017-E01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660003 ID=EY660003; Name=EY660003; organism=Citrus sinensis; type=EST; length=924bp
CTAAAAAAGGCGTNNGNTTTGNCTTTTGCCGTAAAAGGGATTTGGNTGAA
TTATTGGCAGAAAGGCAAAAGTTAGGACCATTTGTCCACGCTTTTGCCTC
TATGCAGCAGGCTTCTCAGTCAAGAAATCAGACGAATAACGGGTTACAAT
CCAAGTTTTGTTGATCATGAAAGGTTTGAGCATGATAGCCCATTTAGGTC
ATTAGGTCAGCCAAATGGAAGACCAATGGATTTGGAGGGTTTGTCTGCAA
TGCAAACTGAGGAAAATGGGCACCTTCAAAGAATGGCCCCTTTTCAAACT
CCTCCTTCAATGGGCTGGCAAGGTATTCCTGGAATTCCAACCACACCTGT
TGTAAAGAGAGTTATTAGACTTGATGTTCCTGTGGATAAATATCCAAATT
TTAATTTTGTCGGCCGGATTTTGGGACCGCGTGGGAACTCGCTCAAAAGA
GTCGAAGCCATGACAGAATGTAGGGTGTTCATTAGAGGCCGGGGTTCAGT
CAAGGATTCAATAAAGGAAGAAAAACTTAAAGATAAACCTGGATATGAGC
ATCTTAATGAGCCACTGCACGTGTTAGTGGAGGCCGAATTTCCAGATGGA
TATATAAATTCCCGCTTGGATCATGCTGTAGCAATACTAGAGAACCTTTT
GAAGCCCGTGGATGAATCCTTGGATCATTTACAGAAGGNAACACTGCGGG
AATTAGCTATGCTGAACGGGTACTCTAGAGAAGAAAGCCCAAGCATGAGT
CCGAGTATGAGTCCTAANATGTCGCCCTTTAACATGCTGGGATGAACGCG
CCCNGACCGGAAGATACATGGTATACCTATCATGATGAAATGAACCTTGA
TGAACACTGAATCCTGCAACTGAGGAATGCTGCCTGAAAACCTCATTGGT
TTGGTCTTCAAACCTTGGGAGGGA
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