EY660003
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660003 vs. ExPASy Swiss-Prot
Match: KHDR1_HUMAN (KH domain-containing, RNA-binding, signal transduction-associated protein 1 OS=Homo sapiens GN=KHDRBS1 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.116e-17 Identity = 47/120 (39.17%), Postives = 75/120 (62.50%), Query Frame = 1 Query: 367 RLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLK--DKPGYEHLNEPLHVLVEAEFPDGYINSRLDHAVAILENLLKPVDESLDHLQKXTLRELAMLNG 720 R+ +PV +YP FNFVG+ILGP+GN++KR++ T ++ + G+GS++D KEE+L+ P Y HLN LHV +E P + + HA+ ++ L P + +D + + EL+ LNG Sbjct: 159 RVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDPKYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP--DMMDDICQEQFLELSYLNG 276
BLAST of EY660003 vs. ExPASy Swiss-Prot
Match: KHDR1_CHICK (KH domain-containing, RNA-binding, signal transduction-associated protein 1 OS=Gallus gallus GN=KHDRBS1 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.116e-17 Identity = 47/120 (39.17%), Postives = 75/120 (62.50%), Query Frame = 1 Query: 367 RLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLK--DKPGYEHLNEPLHVLVEAEFPDGYINSRLDHAVAILENLLKPVDESLDHLQKXTLRELAMLNG 720 R+ +PV +YP FNFVG+ILGP+GN++KR++ T ++ + G+GS++D KEE+L+ P Y HLN LHV +E P + + HA+ ++ L P + +D + + EL+ LNG Sbjct: 142 RVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDPKYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP--DMMDDICQEQFLELSYLNG 259
BLAST of EY660003 vs. ExPASy Swiss-Prot
Match: BBP_YEAST (Branchpoint-bridging protein OS=Saccharomyces cerevisiae GN=MSL5 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.750e-16 Identity = 48/123 (39.02%), Postives = 76/123 (61.79%), Query Frame = 1 Query: 376 VPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPDGYINSRLDHAVAILENL-LKPV--DESLDHLQKXTLRELAMLNGYSREE 735 +PVD+YP+ NFVG +LGPRG +L++++ + C++ IRGRGSVK+ L PG + +PLH L+ A+ D ++ + + +N+ +K V E + L++ LRELA LNG RE+ Sbjct: 154 IPVDQYPDVNFVGLLLGPRGRTLRKLQEDSNCKIAIRGRGSVKEGKNASDL--PPGAMNFEDPLHCLIIADSED-----KIQKGIKVCQNIVIKAVTSPEGQNDLKRGQLRELAELNGTLRED 269
BLAST of EY660003 vs. ExPASy Swiss-Prot
Match: BBP_DICDI (Branchpoint-bridging protein OS=Dictyostelium discoideum GN=sf1 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.365e-15 Identity = 54/152 (35.53%), Postives = 86/152 (56.58%), Query Frame = 1 Query: 277 QRMAPFQTPPSMGWQGIPGIPTTPVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPDGYINSRLDHAVAILENLLKPVDESLDHLQKXTLRELAMLNGYSRE 732 Q++ P PPS +Q P K+ ++ +P+ +P +NF+G I+GPRGN+ KR+E + ++ IRG+GS +D K KL+ + N+ LHVL+ A+ D +LD A ++ L PV+E + ++ LRELA +NG RE Sbjct: 160 QQINPTYKPPS-DYQ-------PPNEKKTRKIYIPIKNHPEYNFIGLIIGPRGNTQKRMEKESGAKIAIRGKGSSRDG-KPTKLQFQE-----NDELHVLLTADTVD-----QLDKAEVLVREFLIPVEEGKNEHKRQQLRELAEMNGTLRE 292
BLAST of EY660003 vs. ExPASy Swiss-Prot
Match: SF01_HUMAN (Splicing factor 1 OS=Homo sapiens GN=SF1 PE=1 SV=4) HSP 1 Score: 83.1889 bits (204), Expect = 2.328e-15 Identity = 54/136 (39.71%), Postives = 75/136 (55.15%), Query Frame = 1 Query: 337 PTTPVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPDGYINSRLDHAVAILENLLK---PVDESLDHLQKXTLRELAMLNGYSREE 735 P T V +V+ +P D+YP NFVG ++GPRGN+LK +E ++ IRG+GSVK+ + KD +EPLH LV A + + AV + N+LK E + L+K LRELA LNG RE+ Sbjct: 132 PATRVSDKVM---IPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEG--KVGRKDGQMLPGEDEPLHALVTANTME-----NVKKAVEQIRNILKQGIETPEDQNDLRKMQLRELARLNGTLRED 257
BLAST of EY660003 vs. ExPASy Swiss-Prot
Match: BBP_SCHPO (Branchpoint-bridging protein OS=Schizosaccharomyces pombe GN=bpb1 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.971e-15 Identity = 47/124 (37.90%), Postives = 77/124 (62.10%), Query Frame = 1 Query: 376 VPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYE-HLNEPLHVLVEAEFPDGYINSRLDHAVAILENLLK---PVDESLDHLQKXTLRELAMLNGYSREE 735 VPV YP NF+G ++GPRG++LK +EA + ++ IRG+GSV KE K + P ++ E LH LV A+ D +++HA+ +++N+++ V E + L++ LR+LA LNG R++ Sbjct: 192 VPVKDYPEINFIGLLIGPRGHTLKDMEAKSGAKIAIRGKGSV----KEGKGRSDPSVRGNMEEDLHCLVTADSED-----KINHAIKLIDNVIQTAASVPEGQNDLKRNQLRQLATLNGTLRDD 306
BLAST of EY660003 vs. ExPASy Swiss-Prot
Match: SF01_MOUSE (Splicing factor 1 OS=Mus musculus GN=Sf1 PE=1 SV=5) HSP 1 Score: 81.6481 bits (200), Expect = 6.773e-15 Identity = 53/136 (38.97%), Postives = 75/136 (55.15%), Query Frame = 1 Query: 337 PTTPVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPDGYINSRLDHAVAILENLLK---PVDESLDHLQKXTLRELAMLNGYSREE 735 P T V +V+ +P D+YP NFVG ++GPRGN+LK +E ++ IRG+GSV++ + KD +EPLH LV A + + AV + N+LK E + L+K LRELA LNG RE+ Sbjct: 132 PATRVSDKVM---IPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVEEG--KVGRKDGQMLPGEDEPLHALVTANTME-----NVKKAVEQIRNILKQGIETPEDQNDLRKMQLRELARLNGTLRED 257
BLAST of EY660003 vs. ExPASy Swiss-Prot
Match: BBP_ASHGO (Branchpoint-bridging protein OS=Ashbya gossypii GN=BBP PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.773e-15 Identity = 46/121 (38.02%), Postives = 73/121 (60.33%), Query Frame = 1 Query: 376 VPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKP-GYEHLNEPLHVLVEAEFPDGYINSRLDHAVAILENLLKPVDESLDHLQKXTLRELAMLNGYSREE 735 +P++ YP NFVG +LGPRGN+LK+++ + C++ IRGRGSVK+ + D P G ++NEPLH ++ A+ + I++ + P E + ++ LRELA+LNG RE+ Sbjct: 155 IPINDYPEINFVGLLLGPRGNTLKQLQQQSGCKIVIRGRGSVKEG---KAATDLPKGAMNMNEPLHCVISADTEEKIPLGINAGESIIIKAITFP--EGQNDFKRGQLRELAVLNGTLRED 270
BLAST of EY660003 vs. ExPASy Swiss-Prot
Match: GRP33_ARTSA (Glycine-rich protein GRP33 OS=Artemia salina PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.509e-14 Identity = 41/134 (30.60%), Postives = 80/134 (59.70%), Query Frame = 1 Query: 271 HLQRMAPFQTPPSMGWQGIPGIPTTPVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPG--YEHLNEPLHVLVEAEFPDGYINSRLDHAVAILENLLKPVDE 666 H++ + +T P+ G + VK V R +PVD++P +NF+G++LGP G+++K+++ T ++ I GRGS++D KEE+L++ Y HLNE LH+ + + ++R+ +A+ ++ + P ++ Sbjct: 45 HIKTGSRPKTVPNTDGSGFMDLYNDTKVKLVSRCCLPVDQFPKYNFLGKLLGPGGSTMKQLQDETMTKISILGRGSMRDRNKEEELRNSGDVKYAHLNEQLHIEIISIASPAEAHARMAYALTEIKKYITPEED 178
BLAST of EY660003 vs. ExPASy Swiss-Prot
Match: BBP_CANGA (Branchpoint-bridging protein OS=Candida glabrata GN=BBP PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.509e-14 Identity = 46/123 (37.40%), Postives = 74/123 (60.16%), Query Frame = 1 Query: 376 VPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPDGYINSRLDHAVAILENL-LKPV--DESLDHLQKXTLRELAMLNGYSREE 735 +PV +YP NFVG +LGPRG +L++++ + C++ IRGRGSVK+ L PG ++PLH L+ A+ + ++++ + N+ +K V E + L++ LRELA LNG RE+ Sbjct: 140 IPVSQYPQINFVGLLLGPRGKTLRKMQEDSGCKIAIRGRGSVKEGKTSSDL--PPGAMDFSDPLHCLIIADNEE-----KIENGIKACRNIVIKAVTSPEGQNELKRGQLRELAELNGTLRED 255 The following BLAST results are available for this feature:
BLAST of EY660003 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY660003 ID=EY660003; Name=EY660003; organism=Citrus sinensis; type=EST; length=924bpback to top |