EY660002

Overview
NameEY660002
Unique NameEY660002
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length914
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660002 vs. ExPASy Swiss-Prot
Match: CYPH_CATRO (Peptidyl-prolyl cis-trans isomerase OS=Catharanthus roseus GN=PCKR1 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.815e-28
Identity = 61/102 (59.80%), Postives = 74/102 (72.55%), Query Frame = 1
Query:  145 GTTFNWFAGTGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVAFGKVVKGLNIVKKIEQVGTGDGKPAQPVKIIDCGEFS 450
            G  F    GTGGESIYG KF DENF   H GPGILSMAN+G NTNGSQFFI   +   LDGKHV FG+VV+G+++VK IE+VG+  G+ A+ V + DCG+ S
Sbjct:   71 GGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTAKKVVVEDCGQLS 172          
BLAST of EY660002 vs. ExPASy Swiss-Prot
Match: CYP2_CAEEL (Peptidyl-prolyl cis-trans isomerase 2 OS=Caenorhabditis elegans GN=cyn-2 PE=2 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.815e-28
Identity = 61/100 (61.00%), Postives = 72/100 (72.00%), Query Frame = 1
Query:  145 GTTFNWFAGTGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVAFGKVVKGLNIVKKIEQVGTGDGKPAQPVKIIDCGE 444
            G  F    GTGGESI+G KF DENFK  H GPG+LSMAN GANTNGSQFF+   +   LDGKHV FGKV++G+++VK IE  G+ DG P+ P  I DCGE
Sbjct:   71 GGDFTEGNGTGGESIHGEKFDDENFKEKHTGPGVLSMANCGANTNGSQFFLCTVKTTWLDGKHVVFGKVIEGMDVVKAIESKGSEDGAPSAPCVIADCGE 170          
BLAST of EY660002 vs. ExPASy Swiss-Prot
Match: CP18D_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Arabidopsis thaliana GN=CYP18-4 PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.815e-28
Identity = 64/102 (62.75%), Postives = 73/102 (71.57%), Query Frame = 1
Query:  145 GTTFNWFAGTGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVAFGKVVKGLNIVKKIEQVGTGDGKPAQPVKIIDCGEFS 450
            G  F    GTGGESIYG KF DENF   H G GILSMANSG NTNGSQFFI   +   LDGKHV FG+VVKGL++VK IE+VG+  GK ++ V I DCG+ S
Sbjct:   71 GGDFTAKNGTGGESIYGAKFKDENFIKKHTGAGILSMANSGPNTNGSQFFICTDKTSWLDGKHVVFGQVVKGLDVVKAIEKVGSDSGKTSKVVTITDCGQLS 172          
BLAST of EY660002 vs. ExPASy Swiss-Prot
Match: CYPH_ALLCE (Peptidyl-prolyl cis-trans isomerase OS=Allium cepa GN=CYP PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.096e-28
Identity = 60/102 (58.82%), Postives = 74/102 (72.55%), Query Frame = 1
Query:  145 GTTFNWFAGTGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVAFGKVVKGLNIVKKIEQVGTGDGKPAQPVKIIDCGEFS 450
            G  F    GTGGESIYG KF DENF   H GPG+LSMAN+G  TNGSQFFI   +   LDGKHV FG+VV+G+++V+ IE+VG+  G+  +PVKI DCG+ S
Sbjct:   49 GGDFTAGNGTGGESIYGAKFKDENFIKKHTGPGVLSMANAGPGTNGSQFFICTEKTAWLDGKHVVFGQVVEGMDVVRAIEKVGSQSGQTKKPVKIADCGQLS 150          
BLAST of EY660002 vs. ExPASy Swiss-Prot
Match: PPID_ASPFU (Peptidyl-prolyl cis-trans isomerase D OS=Aspergillus fumigatus GN=cpr6 PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 4.043e-28
Identity = 63/102 (61.76%), Postives = 72/102 (70.59%), Query Frame = 1
Query:  145 GTTFNWFAGTGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVAFGKVVKGLNIVKKIEQVGTGDGKPAQPVKIIDCGEFS 450
            G  F  F GTGGESIYG KF DENF+L H+ P +LSMANSG  TNGSQFFIT     HLDGKHV FG+V+ G +IV+KIE + T   KP   V I+DCGE S
Sbjct:   79 GGDFTNFNGTGGESIYGEKFPDENFELKHDRPFLLSMANSGPGTNGSQFFITTVPTPHLDGKHVVFGEVINGKSIVRKIENMPTQADKPTTDVTIVDCGELS 180          
BLAST of EY660002 vs. ExPASy Swiss-Prot
Match: PPID_ASPOR (Peptidyl-prolyl cis-trans isomerase D OS=Aspergillus oryzae GN=cpr6 PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.280e-28
Identity = 60/112 (53.57%), Postives = 76/112 (67.86%), Query Frame = 1
Query:  145 GTTFNWFAGTGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVAFGKVVKGLNIVKKIEQVGTGDGKPAQPVKIIDCGEFSESKIQDGKEK 480
            G  F  F GTGGESIYG KF DENF+L H+ P +LSMANSG  TNGSQFFIT     HLDGKHV FG+V+ G ++V+K+E + T   KP + V I++CGE +     D  ++
Sbjct:   73 GGDFTAFNGTGGESIYGEKFPDENFELKHDKPFLLSMANSGPGTNGSQFFITTVPTPHLDGKHVVFGEVINGKSVVRKVENMNTQADKPVKDVTIVECGELTGQDYDDADKQ 184          
BLAST of EY660002 vs. ExPASy Swiss-Prot
Match: PPIA_PONPY (Peptidyl-prolyl cis-trans isomerase A OS=Pongo pygmaeus GN=PPIA PE=2 SV=4)

HSP 1 Score: 124.79 bits (312), Expect = 6.896e-28
Identity = 65/123 (52.85%), Postives = 81/123 (65.85%), Query Frame = 1
Query:   76 KGFSSFLECRFSI*LLYLCPDL*GTTFNWFAGTGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVAFGKVVKGLNIVKKIEQVGTGDGKPAQPVKIIDCGE 444
            KGF     C   I   ++C    G  F    GTGG+SIYG KF DENF L H GPGILSMAN+G NTNGSQFFI   +   LDGKHV FGKV +G+NIV+ +E+ G+ +GK ++ + I DCG+
Sbjct:   44 KGFGYKGSCFHRIIPGFMCQ---GGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQ 163          
BLAST of EY660002 vs. ExPASy Swiss-Prot
Match: PPIA_PIG (Peptidyl-prolyl cis-trans isomerase A OS=Sus scrofa GN=PPIA PE=1 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 6.896e-28
Identity = 65/123 (52.85%), Postives = 81/123 (65.85%), Query Frame = 1
Query:   76 KGFSSFLECRFSI*LLYLCPDL*GTTFNWFAGTGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVAFGKVVKGLNIVKKIEQVGTGDGKPAQPVKIIDCGE 444
            KGF     C   I   ++C    G  F    GTGG+SIYG KF DENF L H GPGILSMAN+G NTNGSQFFI   +   LDGKHV FGKV +G+NIV+ +E+ G+ +GK ++ + I DCG+
Sbjct:   44 KGFGYKGSCFHRIIPGFMCQ---GGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQ 163          
BLAST of EY660002 vs. ExPASy Swiss-Prot
Match: PPIA_PAPAN (Peptidyl-prolyl cis-trans isomerase A OS=Papio anubis GN=PPIA PE=2 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 6.896e-28
Identity = 65/123 (52.85%), Postives = 81/123 (65.85%), Query Frame = 1
Query:   76 KGFSSFLECRFSI*LLYLCPDL*GTTFNWFAGTGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVAFGKVVKGLNIVKKIEQVGTGDGKPAQPVKIIDCGE 444
            KGF     C   I   ++C    G  F    GTGG+SIYG KF DENF L H GPGILSMAN+G NTNGSQFFI   +   LDGKHV FGKV +G+NIV+ +E+ G+ +GK ++ + I DCG+
Sbjct:   44 KGFGYKGSCFHRIIPGFMCQ---GGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQ 163          
BLAST of EY660002 vs. ExPASy Swiss-Prot
Match: PPIA_PANTR (Peptidyl-prolyl cis-trans isomerase A OS=Pan troglodytes GN=PPIA PE=3 SV=3)

HSP 1 Score: 124.79 bits (312), Expect = 6.896e-28
Identity = 65/123 (52.85%), Postives = 81/123 (65.85%), Query Frame = 1
Query:   76 KGFSSFLECRFSI*LLYLCPDL*GTTFNWFAGTGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVAFGKVVKGLNIVKKIEQVGTGDGKPAQPVKIIDCGE 444
            KGF     C   I   ++C    G  F    GTGG+SIYG KF DENF L H GPGILSMAN+G NTNGSQFFI   +   LDGKHV FGKV +G+NIV+ +E+ G+ +GK ++ + I DCG+
Sbjct:   44 KGFGYKGSCFHRIIPGFMCQ---GGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQ 163          
The following BLAST results are available for this feature:
BLAST of EY660002 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 209
Match NameE-valueIdentityDescription
CYPH_CATRO1.815e-2859.80Peptidyl-prolyl cis-trans isomerase OS=Catharanthu... [more]
CYP2_CAEEL1.815e-2861.00Peptidyl-prolyl cis-trans isomerase 2 OS=Caenorhab... [more]
CP18D_ARATH1.815e-2862.75Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Ara... [more]
CYPH_ALLCE3.096e-2858.82Peptidyl-prolyl cis-trans isomerase OS=Allium cepa... [more]
PPID_ASPFU4.043e-2861.76Peptidyl-prolyl cis-trans isomerase D OS=Aspergill... [more]
PPID_ASPOR5.280e-2853.57Peptidyl-prolyl cis-trans isomerase D OS=Aspergill... [more]
PPIA_PONPY6.896e-2852.85Peptidyl-prolyl cis-trans isomerase A OS=Pongo pyg... [more]
PPIA_PIG6.896e-2852.85Peptidyl-prolyl cis-trans isomerase A OS=Sus scrof... [more]
PPIA_PAPAN6.896e-2852.85Peptidyl-prolyl cis-trans isomerase A OS=Papio anu... [more]
PPIA_PANTR6.896e-2852.85Peptidyl-prolyl cis-trans isomerase A OS=Pan trogl... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-017-D11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660002 ID=EY660002; Name=EY660002; organism=Citrus sinensis; type=EST; length=914bp
TTTCTAAACGGGGCGTNCGCTTCAGGGTTTCTATAAAGGGGGGGAAATGG
TATGCGCTATTATTCTGGCATTTTTAAAGGATTTTCTTCCTTTCTTGAAT
GCAGATTCTCTATTTGACTTCTATATTTATGCCCAGACTTGTAAGGAACA
ACCTTTAATTGGTTTGCAGGCACTGGTGGAGAAAGTATATATGGAGGGAA
ATTTACTGATGAGAACTTTAAACTGGATCATAATGGACCTGGCATTCTCT
CTATGGCAAATAGTGGTGCAAACACAAATGGATCTCAGTTCTTTATAACC
TTCAGGCGGCAACACCATCTTGATGGGAAACATGTTGCTTTTGGGAAGGT
TGTAAAGGGATTGAACATCGTTAAGAAAATTGAGCAGGTGGGAACAGGTG
ACGGTAAACCTGCTCAACCTGTTAAAATTATAGATTGTGGTGAATTTTCT
GAAAGTAAAATTCAGGATGGCAAAGAGAAAGGTAATCTGCATGAGTTGCA
GCAGTGATGTCCAGATTTCCTTATCGAACTGATTGTAATTGTATATAACA
TTCTTTCTGGTCTCAGTATATAAAATTCATAATATGGTTTTTCTTCAGTC
AAAAAGAAAAAAGCAAGCCATGTTTCTTCTTCAGAGGATAGTTCTGATGG
CGAAACAGTAAGAAGGCACAAAAAGTCTTTCAAGAAAAGAAGACAGAAAA
GGGAGAGGAGATACCCTTCATCTGATTCATCCGGCTCTGACTCTTATCCT
TCAGAATCTGATTCAAATACAGATTCTGAATCCTCACCATCTGAATCAAG
TTCCCCTGGTGATAGAAGGCCGTAGAAAAGGAAACCAGTTAAAAGAGTTA
GCGAGAGCGTGGAAAGGAAAAGAAGGATGGGCATAGGGAAAAGAGGAAAG
TCACCGGGTTAACG
back to top