EY659990
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYC_HUMAN (Serine hydroxymethyltransferase, cytosolic OS=Homo sapiens GN=SHMT1 PE=1 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 3.030e-63 Identity = 127/242 (52.48%), Postives = 161/242 (66.53%), Query Frame = 2 Query: 209 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFA-TNKSYNVGRMAHLXWVGCCWCHPFTFENADGVTTTLTNTSWG 931 K L PL+ D E+ +II+ E RQ GLELI SENF S +V++A+GS + N +SEGYPG RYYGG E+ID E+LCQKRAL+A++LDP+ WGVNVQ SGSP+NF VYTAL++PH RIM LDLP GGHL+HG+ TD KKISA SIFFE+MPY++N TGYI+YDQLE++A LF + + A N +Y + MAH+ + P FE+ VTTT T G Sbjct: 20 KMLAQPLKDSDVEVYNIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPGQRYYGGTEFIDELETLCQKRALQAYKLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPDTGYINYDQLEENARLFHPKLIIAGTSCYSRNLEYARLRKIADENGAYLMADMAHISGLVAAGVVPSPFEHCHVVTTTTHKTLRG 261
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYC_CAEBR (Serine hydroxymethyltransferase OS=Caenorhabditis briggsae GN=mel-32 PE=3 SV=3) HSP 1 Score: 241.121 bits (614), Expect = 6.750e-63 Identity = 124/229 (54.15%), Postives = 159/229 (69.43%), Query Frame = 2 Query: 227 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFATNK-SYNVGRMAHLXWVGCCWCHPFTFENADGVTTT 910 +E +DPE+ +I+++EK+RQ +GLELI SENFTS +VM A+GS M N +SEGYPGARYYGGNE+ID E LCQKRALE F LDP KWGVNVQSLSGSP+NF VYTAL+ + RIM LDLP GGHL+HG+ T +K+SA S FF++MPY+++ +G IDYD+LE++A LF F + AT +Y + MAH+ + P FE +D VTTT Sbjct: 56 VEKIDPEVFNIMKNEKSRQRRGLELIASENFTSKAVMDALGSAMCNKYSEGYPGARYYGGNEFIDQMEILCQKRALEVFGLDPAKWGVNVQSLSGSPANFAVYTALVGANGRIMGLDLPDGGHLTHGFFTPARKVSATSEFFQSMPYKVDAQSGLIDYDKLEENAMLFRPKVLIAGVSCYARHLDYERFRKIATKAGAYLMSDMAHISGLVAAGLIPSPFEYSDVVTTT 284
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYC_CAEEL (Serine hydroxymethyltransferase OS=Caenorhabditis elegans GN=mel-32 PE=1 SV=2) HSP 1 Score: 240.736 bits (613), Expect = 8.815e-63 Identity = 124/229 (54.15%), Postives = 158/229 (69.00%), Query Frame = 2 Query: 227 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFATNK-SYNVGRMAHLXWVGCCWCHPFTFENADGVTTT 910 +E VDPE+ DI+++EK RQ +GLELI SENFTS +VM A+GS M N +SEGYPGARYYGGNE+ID E LCQKRALE F LDP KWGVNVQ LSGSP+NF VYTA++ + RIM LDLP GGHL+HG+ T +K+SA S FF+++PY+++ +TG IDYD+LE++A LF F + AT +Y + MAH+ + P FE +D VTTT Sbjct: 52 VEKVDPEVFDIMKNEKKRQRRGLELIASENFTSKAVMDALGSAMCNKYSEGYPGARYYGGNEFIDQMELLCQKRALEVFGLDPAKWGVNVQPLSGSPANFAVYTAIVGSNGRIMGLDLPDGGHLTHGFFTPARKVSATSEFFQSLPYKVDPTTGLIDYDKLEQNAMLFRPKAIIAGVSCYARHLDYERFRKIATKAGAYLMSDMAHISGLVAAGLIPSPFEYSDVVTTT 280
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYC_MOUSE (Serine hydroxymethyltransferase, cytosolic OS=Mus musculus GN=Shmt1 PE=1 SV=2) HSP 1 Score: 239.195 bits (609), Expect = 2.565e-62 Identity = 126/242 (52.07%), Postives = 159/242 (65.70%), Query Frame = 2 Query: 209 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFA-TNKSYNVGRMAHLXWVGCCWCHPFTFENADGVTTTLTNTSWG 931 K L+ PL+ D E+ II+ E RQ GLELI SENF S +V++A+GS + N +SEGYPG RYYGG E+ID E LCQKRAL+A+ LDP+ WGVNVQ SGSP+NF VYTAL++PH RIM LDLP GGHL+HG+ TD KKISA SIFFE+MPY++ TGYI+YDQLE++A+LF + + A N +Y + MAH+ + P FE+ VTTT T G Sbjct: 14 KMLSQPLKDSDAEVYSIIKKESNRQRVGLELIASENFASRAVLEALGSSLNNKYSEGYPGQRYYGGTEFIDELEMLCQKRALQAYHLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVYPETGYINYDQLEENASLFHPKLIIAGTSCYSRNLDYARLRKIADDNGAYLMADMAHISGLVAAGVVPSPFEHCHVVTTTTHKTLRG 255
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYC_PONAB (Serine hydroxymethyltransferase, cytosolic OS=Pongo abelii GN=SHMT1 PE=2 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 4.375e-62 Identity = 125/242 (51.65%), Postives = 159/242 (65.70%), Query Frame = 2 Query: 209 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFA-TNKSYNVGRMAHLXWVGCCWCHPFTFENADGVTTTLTNTSWG 931 K L PL+ D E+ +II+ E RQ GLEL SENF S +V++A+GS + N +SEGYPG RYYGG E+ID E+LCQKRAL+A++LDP+ WGVNVQ SGSP+NF VYTAL++PH RIM LDLP GGHL+HG+ T KKISA SIFFE+MPY++N TGYI+YDQLE++A LF + + A N +Y + MAH+ + P FE+ VTTT T G Sbjct: 20 KMLAQPLKDSDVEVYNIIKKESNRQRVGLELFASENFASQAVLEALGSCLNNKYSEGYPGQRYYGGTEFIDELETLCQKRALQAYKLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTGKKKISATSIFFESMPYKVNPDTGYINYDQLEENARLFHPKLIIAGTSCYSRNLDYARLRKIADENGAYLMADMAHISGLVAAGVVPSPFEHCHVVTTTTHKTLRG 261
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYC_RABIT (Serine hydroxymethyltransferase, cytosolic OS=Oryctolagus cuniculus GN=SHMT1 PE=1 SV=2) HSP 1 Score: 237.654 bits (605), Expect = 7.463e-62 Identity = 126/242 (52.07%), Postives = 158/242 (65.29%), Query Frame = 2 Query: 209 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFA-TNKSYNVGRMAHLXWVGCCWCHPFTFENADGVTTTLTNTSWG 931 + L PL+ D E+ DII+ E RQ GLELI SENF S +V++A+GS + N +SEGYPG RYYGG E+ID E+LCQKRAL+A+ LDP+ WGVNVQ SGSP+NF VYTAL++PH RIM LDLP GGHL+HG+ TD KKISA SIFFE+M Y++N TGYIDYD+LE++A LF + A N +Y + MAH+ + P FE+ VTTT T G Sbjct: 20 QMLAQPLKDSDAEVYDIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEENARLFHPKLIIAGTSCYSRNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHCHVVTTTTHKTLRG 261
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYC_SHEEP (Serine hydroxymethyltransferase, cytosolic OS=Ovis aries GN=SHMT1 PE=1 SV=3) HSP 1 Score: 237.269 bits (604), Expect = 9.746e-62 Identity = 126/242 (52.07%), Postives = 158/242 (65.29%), Query Frame = 2 Query: 209 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFA-TNKSYNVGRMAHLXWVGCCWCHPFTFENADGVTTTLTNTSWG 931 K L PL+ D E+ +II+ E RQ GLELI SENF S +V++A+GS + N +SEGYPG RYYGG E+ID E LCQKRAL+ + LDPE WGVNVQ SGSP+NF VYTAL++PH RIM LDLP GGHL+HG+ TD KKISA SIFFE+MPY++N TGYI+YDQLE++A LF + + A N +Y + MAH+ + P FE+ V+TT T G Sbjct: 20 KMLAQPLKDNDVEVYNIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPGQRYYGGTEFIDELEVLCQKRALQVYGLDPECWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPDTGYINYDQLEENARLFHPRLIIAGTSCYSRNLDYARLRKIADDNGAYLMADMAHISGLVAAGVVPSPFEHCHVVSTTTHKTLRG 261
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYC_CANAL (Serine hydroxymethyltransferase, cytosolic OS=Candida albicans GN=SHM2 PE=1 SV=3) HSP 1 Score: 236.884 bits (603), Expect = 1.273e-61 Identity = 126/238 (52.94%), Postives = 156/238 (65.55%), Query Frame = 2 Query: 227 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFATNK----------SYNVGRMAHLXWVGCCWCHPFTFENADGVTTT 910 L+ DPE+ II+ E RQ + LI SENFT+ +V A+G+ M N +SEGYPGARYYGGNE+I E LCQ+RAL+AF L P+KWGVNVQ+LSGSP+N QVY A++KPH+R+M LDLPHGGHLSHGYQTD++KISAVS +FETMPYR++ TG IDYD LEK+A L+ S + R K +Y V MAH+ + P FE AD VTTT Sbjct: 18 LKDTDPEVDQIIKDEIDRQQHSIVLIASENFTTTAVFDALGTPMCNKYSEGYPGARYYGGNEHIHRMELLCQERALKAFGLTPDKWGVNVQTLSGSPANLQVYQAIMKPHERLMGLDLPHGGHLSHGYQTDSRKISAVSTYFETMPYRVDLETGLIDYDMLEKTAVLYRPKVLVAG---------TSAYCRLIDYKRMREIADKVGAYLVVDMAHISGLIAAGVIPSPFEYADIVTTT 246
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYC_BOVIN (Serine hydroxymethyltransferase, cytosolic OS=Bos taurus GN=SHMT1 PE=2 SV=3) HSP 1 Score: 232.646 bits (592), Expect = 2.401e-60 Identity = 124/242 (51.24%), Postives = 157/242 (64.88%), Query Frame = 2 Query: 209 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFA-TNKSYNVGRMAHLXWVGCCWCHPFTFENADGVTTTLTNTSWG 931 K L PL+ D E+ +II+ E RQ GLELI SENF S +V++A+GS + N +SEGYPG RYYGG E+ID E LCQKRAL+ + LD + WGVNVQ SGSP+NF VYTAL++PH RIM LDLP GGHL+HG+ TD KKISA SIFFE+MPY++N TGYI+YDQLE++A LF + + A N +Y + MAH+ + P FE+ V+TT T G Sbjct: 20 KMLAQPLKDNDVEVYNIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPGQRYYGGTEFIDELEVLCQKRALQVYGLDSQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPDTGYINYDQLEENARLFHPRLIIAGTSCYSRNLDYARLRKIADDNGAYLMADMAHVSGLVAAGVVPSPFEHCHVVSTTTHKTLRG 261
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYM_HUMAN (Serine hydroxymethyltransferase, mitochondrial OS=Homo sapiens GN=SHMT2 PE=1 SV=3) HSP 1 Score: 231.106 bits (588), Expect = 6.985e-60 Identity = 123/241 (51.04%), Postives = 155/241 (64.32%), Query Frame = 2 Query: 239 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFATN----------KSYNVGRMAHLXWVGCCWCHPFTFENADGVTTTLTNTSWG 931 DPE+ ++++ EK RQ +GLELI SENF S + ++A+GS + N +SEGYPG RYYGG E +D E LCQ+RALEAF LDP +WGVNVQ SGSP+N VYTALL+PHDRIM LDLP GGHL+HGY +D K+ISA SIFFE+MPY+LN TG IDY+QL +A LF S +AR K++ + MAH+ + P F++AD VTTT T G Sbjct: 53 DPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAG---------TSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRG 284 The following BLAST results are available for this feature:
BLAST of EY659990 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659990 ID=EY659990; Name=EY659990; organism=Citrus sinensis; type=EST; length=932bpback to top |