EY659990
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_DEIRA (Serine hydroxymethyltransferase OS=Deinococcus radiodurans GN=glyA PE=3 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 3.749e-33 Identity = 71/166 (42.77%), Postives = 100/166 (60.24%), Query Frame = 2 Query: 224 PLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 721 P V D + D+I E RQ GLELI SENFTS +V +A GSV+TN ++EGYPG R+YGG E +D E L R + F + W NVQ SGS +N VY AL++P D ++ +DL HGGHL+HG K + + ++ + Y+L+ T ID +++ + A Sbjct: 7 PQAVRDDAVFDLIAQEAERQRTGLELIASENFTSAAVREAQGSVLTNKYAEGYPGKRWYGGCEVVDQVEQLAIDRVKQLFNAE---W-ANVQPHSGSSANLAVYNALIQPGDTVLGMDLSHGGHLTHG-----NKANFSGMRYQMVAYQLDRETERIDMEEVRRLA 163 HSP 2 Score: 31.187 bits (69), Expect = 3.749e-33 Identity = 12/30 (40.00%), Postives = 21/30 (70.00%), Query Frame = 1 Query: 721 HPLXXKLIVAGASAYARLYDYERIRKVCNK 810 H K+I+AGASAY+R+ D+ R++ ++ Sbjct: 164 HEHKPKMIIAGASAYSRVIDFAAFREIADE 193
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_THEAB (Serine hydroxymethyltransferase OS=Thermosipho africanus (strain TCF52B) GN=glyA PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 4.267e-33 Identity = 89/232 (38.36%), Postives = 120/232 (51.72%), Query Frame = 2 Query: 239 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFATN-KSYNVGRMAHLXWVGCCWCHPFTFENADGVTTTLTNTSWG 931 DPEI D+I E RQ GLELI SENF S++V++A+GSV+TN ++EGYPG RYYGG E++D+AE L + RA E F + NVQ SGS +N Y A+ +P D IM + L HGGHL+HG ++ + +PY +N T IDYD++ A F A +Y + MAH + +P E A VT+T T G Sbjct: 9 DPEIYDVILKEWERQEYGLELIASENFASLAVIEAMGSVLTNKYAEGYPGRRYYGGCEWVDVAEKLARDRAKELFNVK----YANVQPHSGSQANMGAYFAVSEPGDTIMGMSLSHGGHLTHG-----ASVNFSGRIYNVVPYGVNPETEVIDYDEVRDLALKHKPKIIVAGGSAYSRIIDFKKFREIADEVGAYLIVDMAHFAGLVAAGIYPNPAEYAHIVTSTTHKTLRG 231
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_METMA (Serine hydroxymethyltransferase OS=Methanosarcina mazei GN=glyA PE=3 SV=2) HSP 1 Score: 142.124 bits (357), Expect = 4.267e-33 Identity = 89/236 (37.71%), Postives = 126/236 (53.39%), Query Frame = 2 Query: 227 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFATN-KSYNVGRMAHLXWVGCCWCHPFTFENADGVTTTLTNTSWG 931 +E +DPE+ + I++E RQ L LI SEN+ S +VM+A GS+MTN ++EGY G RYYGG +++D+AE+L RA E F VNVQ SGS +N VY ++L+P D I+++DL HGGHLSHG +S + +PY +++ T +DYD+L K A F A +Y + +AH+ + HP AD VTTT T G Sbjct: 4 IEKIDPELFEAIKNEADRQEHKLNLIASENYASRAVMEAQGSIMTNKYAEGYSGKRYYGGCDFVDVAENLAIARAKELFGAK----YVNVQPHSGSGANMAVYFSVLQPGDTILSMDLSHGGHLSHG-----SPVSFSGKLYNIVPYGVSKETEALDYDELLKLAKECKPRMIVCGASAYPRVIDFKRFREIADEVGAYLLADIAHIAGLVVAGVHPSPVPYADFVTTTTHKTLRG 230
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_METAC (Serine hydroxymethyltransferase OS=Methanosarcina acetivorans GN=glyA PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 4.267e-33 Identity = 89/236 (37.71%), Postives = 125/236 (52.97%), Query Frame = 2 Query: 227 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFATN-KSYNVGRMAHLXWVGCCWCHPFTFENADGVTTTLTNTSWG 931 +E +DP++ + I+ E RQ L LI SEN+ S +VM+A GS+MTN ++EGY G RYYGG +++D+AE+L RA E F VNVQ SGS +N VY ++L+P D IM++DL HGGHLSHG +S + +PY +++ T +DYD+L K A F A +Y + +AH+ + HP AD VTTT T G Sbjct: 4 IEKIDPDMFEAIQKEADRQEHKLNLIASENYASRAVMEAQGSIMTNKYAEGYSGKRYYGGCDFVDIAENLAIARAKEIFGAK----YVNVQPHSGSGANMAVYFSVLQPGDTIMSMDLSHGGHLSHG-----SPVSFSGKLYNIVPYGVSKETEALDYDELMKMAKECKPKMIVCGASAYPRVIDFKKFREIADEVGAYLLADIAHIAGLVVSGVHPSPVPYADFVTTTTHKTLRG 230
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA1_AGRT5 (Serine hydroxymethyltransferase 1 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=glyA1 PE=3 SV=2) HSP 1 Score: 130.568 bits (327), Expect = 4.879e-33 Identity = 72/166 (43.37%), Postives = 100/166 (60.24%), Query Frame = 2 Query: 224 PLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 721 PL VDP+I IE E RQ +ELI SEN S +V++A GS+MTN ++EGYPG RYYGG +++D+AE L +RA + F ++ NVQ SGS N V+ ALL+P D M LDL GGHL+HG ++ +F + Y + E +D D++E+ A Sbjct: 11 PLAEVDPDIFGAIEKELGRQRHEIELIASENIVSRAVLEAQGSIMTNKYAEGYPGKRYYGGCQFVDIAEELAIERAKKLFGVN----FANVQPNSGSQMNQAVFLALLQPGDTFMGLDLNSGGHLTHG-----SPVNMSGKWFNVVSYGVREGDNLLDMDEVERKA 167 HSP 2 Score: 32.3426 bits (72), Expect = 4.879e-33 Identity = 13/35 (37.14%), Postives = 24/35 (68.57%), Query Frame = 1 Query: 706 VGEKCHPLXXKLIVAGASAYARLYDYERIRKVCNK 810 V K KLI+AG +AY+R++D++R R++ ++ Sbjct: 163 VERKAKETRPKLILAGGTAYSRVWDWKRFREIADE 197
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_THENN (Serine hydroxymethyltransferase OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=glyA PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 5.573e-33 Identity = 90/233 (38.63%), Postives = 122/233 (52.36%), Query Frame = 2 Query: 236 VDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFATN-KSYNVGRMAHLXWVGCCWCHPFTFENADGVTTTLTNTSWG 931 VDPEI +++ +E RQ GLELI SENF S++V++ +GSV+TN ++EGYPG RYYGG E++D AE L +RA + F + NVQ SGS +N VY AL +P D IM + L HGGHL+HG ++ F+ + Y +N T IDYD++ K A F A +Y + MAH + HP E A VT+T T G Sbjct: 8 VDPEIYEVLVNELRRQEYGLELIASENFASLAVIETMGSVLTNKYAEGYPGRRYYGGCEWVDRAEELAIERAKKLFGAE----FANVQPHSGSQANMAVYLALAQPGDTIMGMSLSHGGHLTHG-----APVNFSGRIFKVVHYGVNLETETIDYDEVRKLALEHRPKIIVAGGSAYARTIDFKRFREIADEVGAYLMVDMAHFAGLVAAGIHPNPVEYAHVVTSTTHKTLRG 231
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_STRMK (Serine hydroxymethyltransferase OS=Stenotrophomonas maltophilia (strain K279a) GN=glyA PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 5.573e-33 Identity = 92/236 (38.98%), Postives = 124/236 (52.54%), Query Frame = 2 Query: 227 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFATN-KSYNVGRMAHLXWVGCCWCHPFTFENADGVTTTLTNTSWG 931 +E DPE+A I E RQ +ELI SEN+TS +VM+A GS +TN ++EGYPG RYYGG EY+D+AE L R + F D NVQ SGS +N VY ALL+P D I+ + L HGGHL+HG K++A F + Y +N+ G IDYD++E+ A + F A +Y MAH+ + +P E+A VT+T T G Sbjct: 8 IESYDPELAKAIAAETQRQEDHVELIASENYTSPAVMEAQGSQLTNKYAEGYPGKRYYGGCEYVDIAEQLAIDRLKQLFGAD----YANVQPHSGSQANQAVYFALLQPGDTILGMSLAHGGHLTHG-----AKVNASGKLFNAVQYGVNDQ-GLIDYDEVERLALEHKPKMVVAGFSAYSQVIDWARFRAIADKVGAYLFVDMAHVAGLVAAGVYPSPLEHAHVVTSTTHKTLRG 233
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_STRM5 (Serine hydroxymethyltransferase OS=Stenotrophomonas maltophilia (strain R551-3) GN=glyA PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 5.573e-33 Identity = 92/236 (38.98%), Postives = 124/236 (52.54%), Query Frame = 2 Query: 227 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFATN-KSYNVGRMAHLXWVGCCWCHPFTFENADGVTTTLTNTSWG 931 +E DPE+A I E RQ +ELI SEN+TS +VM+A GS +TN ++EGYPG RYYGG EY+D+AE L R + F D NVQ SGS +N VY ALL+P D I+ + L HGGHL+HG K++A F + Y +N+ G IDYD++E+ A + F A +Y MAH+ + +P E+A VT+T T G Sbjct: 8 IESYDPELAKAIAAETQRQEDHVELIASENYTSPAVMEAQGSQLTNKYAEGYPGKRYYGGCEYVDIAEQLAIDRLKQLFGAD----YANVQPHSGSQANQAVYFALLQPGDTILGMSLAHGGHLTHG-----AKVNASGKLFNAVQYGVNDQ-GLIDYDEVERLALEHKPKMVVAGFSAYSQVIDWARFRAIADKVGAYLFVDMAHVAGLVAAGVYPSPLEHAHVVTSTTHKTLRG 233
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_GEOLS (Serine hydroxymethyltransferase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=glyA PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 5.573e-33 Identity = 87/236 (36.86%), Postives = 122/236 (51.69%), Query Frame = 2 Query: 227 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFATNKSYNV-GRMAHLXWVGCCWCHPFTFENADGVTTTLTNTSWG 931 L DP +A+ I+HE RQ LELI SENF S +V++A GSVMTN ++EGYPG RYYGG ++D+ E+L +RA E F + NVQ +GS +N VY A+ +P D I+ ++L HGGHL+HG ++ F+ +PY ++ T IDY+++E+ A F A V MAH+ + HP A+ VTTT T G Sbjct: 4 LSQFDPAVAEAIQHETERQEYNLELIASENFVSEAVLEAQGSVMTNKYAEGYPGKRYYGGCHHVDVVENLAIERAKELFGAE----HANVQPHAGSQANMAVYNAVCQPGDTILGMNLSHGGHLTHG-----SPVNFSGRFYNVVPYGVSPDTETIDYNEVERLALEHKPKMIVVGASAYPRIIDFPAFRAIADKVGAKVMVDMAHIAGLVAAGVHPNPVPYAEFVTTTTHKTLRG 230
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA1_BORBR (Serine hydroxymethyltransferase 1 OS=Bordetella bronchiseptica GN=glyA1 PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 6.354e-33 Identity = 74/166 (44.58%), Postives = 101/166 (60.84%), Query Frame = 2 Query: 224 PLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 721 PL DPEI ++ E+ RQ +ELI SENF S +V+ A GSVMTN ++EGYPG RYYGG ++D+AE +RA F + NVQ SGS +N VY ALL P DRI+ LDL GGHL+HG ++ +FE + Y ++ + ID D++E++A Sbjct: 18 PLRHADPEIWRAVDAERQRQMHSIELIASENFVSQAVLDAQGSVMTNKYAEGYPGRRYYGGCRHVDVAERAAIERARRLFGCE----YANVQPHSGSQANQAVYLALLAPGDRILGLDLKAGGHLTHG-----AHVNLSGKWFEALSYGVDPVSHRIDMDEVERTA 174 HSP 2 Score: 30.0314 bits (66), Expect = 6.354e-33 Identity = 12/24 (50.00%), Postives = 18/24 (75.00%), Query Frame = 1 Query: 736 KLIVAGASAYARLYDYERIRKVCN 807 +LI+AG SAYAR+ D+ R R + + Sbjct: 180 RLIIAGGSAYARVPDFARFRAIAD 203 The following BLAST results are available for this feature:
BLAST of EY659990 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659990 ID=EY659990; Name=EY659990; organism=Citrus sinensis; type=EST; length=932bpback to top |