EY659990
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYM_YEAST (Serine hydroxymethyltransferase, mitochondrial OS=Saccharomyces cerevisiae GN=SHM1 PE=1 SV=2) HSP 1 Score: 206.068 bits (523), Expect = 2.406e-52 Identity = 109/234 (46.58%), Postives = 147/234 (62.82%), Query Frame = 2 Query: 215 LNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDT-KKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFATN-KSYNVGRMAHLXWVGCCWCHPFTFENADGVTTT 910 ++ P+ DPE+ DI++ E+ RQ + LIPSENFTS +VM +GS + N +SEGYPG RYYGGNE ID +ESLCQ RALE + LDP KWGVNVQ LSG+P+N VY+A++ +R+M LDLP GGHLSHGYQ + IS +S +F++MPY ++ +TG IDYD L+ A F + F + +Y + MAH+ + P FE++D VTTT Sbjct: 29 VSKPVSEGDPEMFDILQQERHRQKHSITLIPSENFTSKAVMDLLGSELQNKYSEGYPGERYYGGNEIIDKSESLCQARALELYGLDPAKWGVNVQPLSGAPANLYVYSAIMNVGERLMGLDLPDGGHLSHGYQLKSGTPISFISKYFQSMPYHVDHTTGLIDYDNLQVLAKAFRPKVIVAGTSAYSRLIDYARFKEISQGCGAYLMSDMAHISGLVAANVVPSPFEHSDIVTTT 262
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYC_ENCCU (Serine hydroxymethyltransferase, cytosolic OS=Encephalitozoon cuniculi GN=SHMT-1 PE=3 SV=2) HSP 1 Score: 195.667 bits (496), Expect = 2.151e-50 Identity = 97/169 (57.40%), Postives = 122/169 (72.19%), Query Frame = 2 Query: 224 PLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF 730 PLE+ DPE+ +I E RQ K + LI SEN+ S M+A GSV+TN +SEG G RYYGG ++D E LCQKRALE F LDP+ WGVNVQ SGSP+NF +YTA++ P RIM LDLP GGHL+HGY+T T+KISA S++F++ PY + S G IDY+ LEK+ T F Sbjct: 13 PLEMADPELHALICGEVERQKKTINLIASENYAHQSAMEACGSVLTNKYSEGRVGERYYGGTHWVDRIELLCQKRALELFGLDPDVWGVNVQPYSGSPANFAIYTAVVPPGGRIMGLDLPSGGHLTHGYKTKTRKISASSVYFDSRPYTVG-SNGLIDYEGLEKTFTDF 180 HSP 2 Score: 25.409 bits (54), Expect = 2.151e-50 Identity = 8/24 (33.33%), Postives = 17/24 (70.83%), Query Frame = 1 Query: 739 LIVAGASAYARLYDYERIRKVCNK 810 +++ G SAY+R DY+R++ + + Sbjct: 184 ILICGYSAYSRDIDYKRLQSIAGR 207
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_ACIBL (Serine hydroxymethyltransferase OS=Acidobacteria bacterium (strain Ellin345) GN=glyA PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 3.078e-39 Identity = 79/170 (46.47%), Postives = 111/170 (65.29%), Query Frame = 2 Query: 212 QLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 721 +++ L DP+IA+ I +E+ RQ +GLELI SENF S +V+QA GSV TN ++EGYPG RYYGG EY D+ E+L + RA E F + NVQ SGS +N + Y A+L+P D I+ L+L HGGHL+HG+ ++ ++ +PY + + T IDYD+LEK A Sbjct: 4 RMSQSLNEEDPQIAEAIANEERRQHEGLELIASENFVSEAVLQAAGSVFTNKYAEGYPGKRYYGGCEYADVVENLARDRAKELFGAE----HANVQPHSGSSANMEAYGAILQPGDTILGLNLAHGGHLTHGH-----PLNFSGKTYKIVPYGVTKETETIDYDELEKLA 164 HSP 2 Score: 33.8834 bits (76), Expect = 3.078e-39 Identity = 14/30 (46.67%), Postives = 23/30 (76.67%), Query Frame = 1 Query: 721 HPLXXKLIVAGASAYARLYDYERIRKVCNK 810 HP K+IV G SAY R++D++R+R++ +K Sbjct: 168 HP---KVIVGGGSAYPRIFDFKRMREIADK 194
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_CHLTE (Serine hydroxymethyltransferase OS=Chlorobium tepidum GN=glyA PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.155e-38 Identity = 82/168 (48.81%), Postives = 112/168 (66.67%), Query Frame = 2 Query: 218 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 721 N L+ +DPE+ + I +E RQ + LELI SENFTS +VM+A GSVMTN ++EGYPG RYYGG E++D+AE+L + RA + F + VNVQ SGS +N V A+LKP D IM LDL HGGHL+HG K++ FF+ Y +++ TG ID +++E+ A Sbjct: 3 NDILKRLDPEVFEAIANETKRQTETLELIASENFTSKAVMEACGSVMTNKYAEGYPGKRYYGGCEFVDVAENLARDRAKKLFGCE----YVNVQPHSGSSANMAVLFAVLKPGDAIMGLDLSHGGHLTHG-----SKVNFSGQFFDAHSYGVDKETGIIDMNKVEEMA 161 HSP 2 Score: 31.5722 bits (70), Expect = 1.155e-38 Identity = 14/35 (40.00%), Postives = 23/35 (65.71%), Query Frame = 1 Query: 706 VGEKCHPLXXKLIVAGASAYARLYDYERIRKVCNK 810 V E + KLI+ GASAY++ +D++ R+V +K Sbjct: 157 VEEMARRVKPKLIITGASAYSQGFDFKAFREVADK 191
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_CHLP8 (Serine hydroxymethyltransferase OS=Chlorobaculum parvum (strain NCIB 8327) GN=glyA PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 3.327e-38 Identity = 81/165 (49.09%), Postives = 110/165 (66.67%), Query Frame = 2 Query: 227 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 721 L+ +DPE+ + I +E RQ + LELI SENFTS +VM+A GSVMTN ++EGYPG RYYGG E++D+AE+L + RA + F + VNVQ SGS +N V A+LKP D IM LDL HGGHL+HG K++ FF+ Y +++ TG ID + +E+ A Sbjct: 6 LKRLDPEVFEAIANETRRQTETLELIASENFTSTAVMEACGSVMTNKYAEGYPGKRYYGGCEFVDVAENLARDRAKKLFGCE----YVNVQPHSGSSANMAVLFAVLKPGDSIMGLDLSHGGHLTHG-----SKVNFSGQFFDAHSYGVDKETGIIDMNAVEEMA 161 HSP 2 Score: 30.4166 bits (67), Expect = 3.327e-38 Identity = 13/35 (37.14%), Postives = 23/35 (65.71%), Query Frame = 1 Query: 706 VGEKCHPLXXKLIVAGASAYARLYDYERIRKVCNK 810 V E + KLI+ GASAY++ +D++ R++ +K Sbjct: 157 VEEMALKVKPKLIITGASAYSQGFDFKAFREIADK 191
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_BACTN (Serine hydroxymethyltransferase OS=Bacteroides thetaiotaomicron GN=glyA PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 9.587e-38 Identity = 79/161 (49.07%), Postives = 100/161 (62.11%), Query Frame = 2 Query: 239 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 721 D I DIIE E RQ KG+ELI SENF S VMQA+GS +TN ++EGYPG RYYGG E +D +E + R E F + W NVQ SG+ +N V+ A+L P D+ M L+L HGGHLSHG +T I + Y LN+ TG +DYDQ+E+ A Sbjct: 4 DDLIFDIIEKEHQRQLKGIELIASENFVSDQVMQAMGSCLTNKYAEGYPGKRYYGGCEVVDQSEQIAIDRLKEIFGAE---W-ANVQPHSGAQANAAVFLAVLNPGDKFMGLNLAHGGHLSHGSLVNTS-----GIIYTPCEYNLNQETGRVDYDQMEEVA 155 HSP 2 Score: 33.4982 bits (75), Expect = 9.587e-38 Identity = 12/25 (48.00%), Postives = 21/25 (84.00%), Query Frame = 1 Query: 736 KLIVAGASAYARLYDYERIRKVCNK 810 K+I+ G SAY+R +DY+R+R++ +K Sbjct: 161 KMIIGGGSAYSREWDYKRMREIADK 185
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_BACV8 (Serine hydroxymethyltransferase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=glyA PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 2.761e-37 Identity = 78/161 (48.45%), Postives = 100/161 (62.11%), Query Frame = 2 Query: 239 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 721 D I DIIE E RQ KG+ELI SENF S VMQA+GS +TN ++EGYPG RYYGG E +D +E + R + F + W NVQ SG+ +N V+ A+L P D+ M L+L HGGHLSHG +T I + Y LN+ TG +DYDQ+E+ A Sbjct: 4 DDLIFDIIEKEHQRQLKGIELIASENFVSDQVMQAMGSCLTNKYAEGYPGKRYYGGCEVVDQSEQIAIDRLKQIFGAE---W-ANVQPHSGAQANAAVFLAVLNPGDKFMGLNLAHGGHLSHGSLVNTS-----GIIYTPCEYNLNKETGRVDYDQMEEIA 155 HSP 2 Score: 33.4982 bits (75), Expect = 2.761e-37 Identity = 12/25 (48.00%), Postives = 21/25 (84.00%), Query Frame = 1 Query: 736 KLIVAGASAYARLYDYERIRKVCNK 810 K+I+ G SAY+R +DY+R+R++ +K Sbjct: 161 KMIIGGGSAYSREWDYKRMREIADK 185
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_CLOPH (Serine hydroxymethyltransferase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=glyA PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 3.599e-37 Identity = 75/165 (45.45%), Postives = 110/165 (66.67%), Query Frame = 2 Query: 227 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 721 ++V DPE+AD I E ARQ +ELI SENF S +VM A+GS +TN ++EGYPG RYYGG E++D+AE+L +RA + F NVQ SG+ +N V+ ALL+P D +M ++L HGGHL+HG ++ +F +PY ++++ G+IDY+++EK A Sbjct: 7 IKVFDPELADSITMEIARQNDHIELIASENFVSKAVMAAMGSPLTNKYAEGYPGKRYYGGCEFVDIAENLAIERAKKLFGCT----YANVQPHSGAQANMAVFFALLQPGDTVMGMNLAHGGHLTHG-----SPVNFSGSYFNIVPYGVDDN-GFIDYEEVEKIA 161 HSP 2 Score: 36.5798 bits (83), Expect = 3.599e-37 Identity = 17/34 (50.00%), Postives = 25/34 (73.53%), Query Frame = 1 Query: 706 VGEKCHPLXXKLIVAGASAYARLYDYERIRKVCN 807 + ++C P KLIVAGASAYAR D++R R++ + Sbjct: 160 IAKECKP---KLIVAGASAYARKIDFKRFREIAD 190
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_AQUAE (Serine hydroxymethyltransferase OS=Aquifex aeolicus GN=glyA PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 4.685e-37 Identity = 77/161 (47.83%), Postives = 102/161 (63.35%), Query Frame = 2 Query: 239 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 721 DPE+ D + E RQ+ LE+I SENFTS++VM+A GSV+TN ++EG PG RYYGG EY+D+ E+L +RA + F + NVQ SGS +N VY A+L P D IM +DL HGGHL+HG K++ + + Y +N T IDYDQL K A Sbjct: 8 DPEVFDAVVKEYERQFYNLEMIASENFTSLAVMEATGSVLTNKYAEGLPGKRYYGGCEYVDVVENLAIERAKKLFGAE----HANVQPHSGSQANMAVYFAVLNPGDTIMGMDLAHGGHLTHG-----AKVNFSGKLYNVIHYGVNPETELIDYDQLYKLA 159 HSP 2 Score: 31.9574 bits (71), Expect = 4.685e-37 Identity = 12/25 (48.00%), Postives = 21/25 (84.00%), Query Frame = 1 Query: 736 KLIVAGASAYARLYDYERIRKVCNK 810 KLIV GASAY R++D+ ++R++ ++ Sbjct: 165 KLIVGGASAYPRVFDWAKMREIADE 189
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_THETN (Serine hydroxymethyltransferase OS=Thermoanaerobacter tengcongensis GN=glyA PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 8.308e-37 Identity = 93/232 (40.09%), Postives = 124/232 (53.45%), Query Frame = 2 Query: 239 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFATN-KSYNVGRMAHLXWVGCCWCHPFTFENADGVTTTLTNTSWG 931 DPEIA++I E RQ +ELI SENF S +VM+A+G+ +TN ++EGYPG RYYGG EY+DMAE L ++R + F + NVQ SG+ +N Y ALLKP D ++ +DL HGGHL+HG K++ + + Y + E TGYIDYDQ+E A F A +Y + MAH+ + HP AD VTTT T G Sbjct: 10 DPEIAEVILKELNRQRNKIELIASENFVSRAVMEAMGTPLTNKYAEGYPGRRYYGGCEYVDMAEELARERLKKLFGAE----HANVQPHSGAQANMAAYFALLKPGDTVLGMDLAHGGHLTHG-----SKVNFSGQIYNFVSYGVREDTGYIDYDQVEDLAKKHKPKLIVAGASAYPRIIDFKKFREIADKVGAYLMVDMAHIAGLVAAGLHPNPVPYADVVTTTTHKTLRG 232 The following BLAST results are available for this feature:
BLAST of EY659990 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659990 ID=EY659990; Name=EY659990; organism=Citrus sinensis; type=EST; length=932bpback to top |