EY659990
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_PELLD (Serine hydroxymethyltransferase OS=Pelodictyon luteolum (strain DSM 273) GN=glyA PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.035e-36 Identity = 81/168 (48.21%), Postives = 108/168 (64.29%), Query Frame = 2 Query: 227 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF 730 L++ D E+ D I E RQ + LELI SENFTS +VMQA GSVMTN ++EGYPG RYYGG E++D+AE L ++RA + F + VNVQ SGS +N V ++LKP DRIM LDL HGGHL+HG ++ F+ Y ++ TG ID +++E+ A F Sbjct: 6 LKMQDREVFDAIAGETVRQMETLELIASENFTSRAVMQACGSVMTNKYAEGYPGKRYYGGCEFVDIAEDLARERARKLFGCE----YVNVQPHSGSSANMAVLFSVLKPGDRIMGLDLSHGGHLTHG-----SSVNFSGQMFDARSYGVDRETGIIDMNKVEEMALDF 164 HSP 2 Score: 28.8758 bits (63), Expect = 1.035e-36 Identity = 10/25 (40.00%), Postives = 20/25 (80.00%), Query Frame = 1 Query: 736 KLIVAGASAYARLYDYERIRKVCNK 810 +LI+ GASAY++ +D++ R++ +K Sbjct: 167 RLIICGASAYSQGFDFKAFREIADK 191
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_BACFR (Serine hydroxymethyltransferase OS=Bacteroides fragilis GN=glyA PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.036e-36 Identity = 77/161 (47.83%), Postives = 99/161 (61.49%), Query Frame = 2 Query: 239 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 721 D I DIIE E RQ KG+ELI SENF S VM+A+GS +TN ++EGYPG RYYGG E +D +E + R E F + W NVQ SG+ +N V+ A+L P D+ M L+L HGGHLSHG +T I + Y L + TG +DYDQ+E+ A Sbjct: 4 DDLIFDIIEKEHQRQLKGIELIASENFVSDQVMEAMGSCLTNKYAEGYPGKRYYGGCEVVDQSEQIAIDRLKEIFGAE---W-ANVQPHSGAQANAAVFLAVLNPGDKFMGLNLAHGGHLSHGSLVNTS-----GIIYTPCEYNLKQETGRVDYDQMEEVA 155 HSP 2 Score: 33.4982 bits (75), Expect = 1.036e-36 Identity = 12/25 (48.00%), Postives = 21/25 (84.00%), Query Frame = 1 Query: 736 KLIVAGASAYARLYDYERIRKVCNK 810 K+I+ G SAY+R +DY+R+R++ +K Sbjct: 161 KMIIGGGSAYSREWDYKRMREIADK 185
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_BACFN (Serine hydroxymethyltransferase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=glyA PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.036e-36 Identity = 77/161 (47.83%), Postives = 99/161 (61.49%), Query Frame = 2 Query: 239 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 721 D I DIIE E RQ KG+ELI SENF S VM+A+GS +TN ++EGYPG RYYGG E +D +E + R E F + W NVQ SG+ +N V+ A+L P D+ M L+L HGGHLSHG +T I + Y L + TG +DYDQ+E+ A Sbjct: 4 DDLIFDIIEKEHQRQLKGIELIASENFVSDQVMEAMGSCLTNKYAEGYPGKRYYGGCEVVDQSEQIAIDRLKEIFGAE---W-ANVQPHSGAQANAAVFLAVLNPGDKFMGLNLAHGGHLSHGSLVNTS-----GIIYTPCEYNLKQETGRVDYDQMEEVA 155 HSP 2 Score: 33.4982 bits (75), Expect = 1.036e-36 Identity = 12/25 (48.00%), Postives = 21/25 (84.00%), Query Frame = 1 Query: 736 KLIVAGASAYARLYDYERIRKVCNK 810 K+I+ G SAY+R +DY+R+R++ +K Sbjct: 161 KMIIGGGSAYSREWDYKRMREIADK 185
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_THEPX (Serine hydroxymethyltransferase OS=Thermoanaerobacter sp. (strain X514) GN=glyA PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 1.085e-36 Identity = 92/232 (39.66%), Postives = 124/232 (53.45%), Query Frame = 2 Query: 239 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFATN-KSYNVGRMAHLXWVGCCWCHPFTFENADGVTTTLTNTSWG 931 DPEIAD IE E RQ +ELI SENF S +VM+A+GS +TN ++EGYP RYYGG EY+D+AE L ++R + F + NVQ SG+ +N Y AL+KP D ++ +DL HGGHL+HG K++ + + Y + E TGYIDYD++E+ A F A +Y + MAH+ + HP AD VTTT T G Sbjct: 10 DPEIADAIEKELIRQRNKIELIASENFVSRAVMEAMGSPLTNKYAEGYPNKRYYGGCEYVDIAEELARERLKKLFGAE----HANVQPHSGAQANMAAYFALIKPGDTVLGMDLAHGGHLTHG-----SKVNFSGQIYNFVSYGVREDTGYIDYDEVERVAKKHKPKLIVAGASAYPRIIDFKRFREIADKVGAYLMVDMAHIAGLVAAGLHPNPVPYADVVTTTTHKTLRG 232
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_THEP3 (Serine hydroxymethyltransferase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=glyA PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 1.085e-36 Identity = 92/232 (39.66%), Postives = 124/232 (53.45%), Query Frame = 2 Query: 239 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFATN-KSYNVGRMAHLXWVGCCWCHPFTFENADGVTTTLTNTSWG 931 DPEIAD IE E RQ +ELI SENF S +VM+A+GS +TN ++EGYP RYYGG EY+D+AE L ++R + F + NVQ SG+ +N Y AL+KP D ++ +DL HGGHL+HG K++ + + Y + E TGYIDYD++E+ A F A +Y + MAH+ + HP AD VTTT T G Sbjct: 10 DPEIADAIEKELIRQRNKIELIASENFVSRAVMEAMGSPLTNKYAEGYPNKRYYGGCEYVDIAEELARERLKKLFGAE----HANVQPHSGAQANMAAYFALIKPGDTVLGMDLAHGGHLTHG-----SKVNFSGQIYNFVSYGVREDTGYIDYDEVERVAKKHKPKLIVAGASAYPRIIDFKRFREIADKVGAYLMVDMAHIAGLVAAGLHPNPVPYADVVTTTTHKTLRG 232
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_PARD8 (Serine hydroxymethyltransferase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=glyA PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.349e-36 Identity = 74/161 (45.96%), Postives = 101/161 (62.73%), Query Frame = 2 Query: 239 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 721 D I DIIE E RQ KG+ELI SENF S VMQA+GS +TN ++EGYPG RYYGG E +D +E++ +R + F + W NVQ SG+ +N V+ A+L P D + L+L HGGHLSHG +++ + + Y + E TG +DYDQ+E+ A Sbjct: 4 DNIIFDIIEKEHQRQLKGIELIASENFVSDQVMQAMGSCLTNKYAEGYPGKRYYGGCEVVDQSETIAIERLKKLFNAE---W-ANVQPHSGAQANAAVFFAVLNPGDTFLGLNLSHGGHLSHG-----SPVNSSGVLYHATEYNVKEDTGRVDYDQMEEVA 155 HSP 2 Score: 34.2686 bits (77), Expect = 1.349e-36 Identity = 14/25 (56.00%), Postives = 21/25 (84.00%), Query Frame = 1 Query: 736 KLIVAGASAYARLYDYERIRKVCNK 810 KLIV G SAY+R +DY+R+R++ +K Sbjct: 161 KLIVGGGSAYSRDWDYKRMREIADK 185
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_EUBR3 (Serine hydroxymethyltransferase OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=glyA PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 2.291e-36 Identity = 75/161 (46.58%), Postives = 103/161 (63.98%), Query Frame = 2 Query: 239 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 721 DPEIA I E RQ +ELI SEN+ S +VM A+GS++TN ++EGYPG RYYGG E +D E L ++RA E F + VNVQ SG+ +N V A+LKP D IM ++L HGGHL+HG ++ +F +PY +N+ G+IDYD++E+ A Sbjct: 11 DPEIASAITDEFERQNSHIELIASENWVSPAVMSAMGSILTNKYAEGYPGRRYYGGCECVDEVEELARERAKELFGAE----YVNVQPHSGAQANMAVQFAILKPGDTIMGMNLDHGGHLTHG-----SPVNFSGSYFHVVPYGVNDE-GFIDYDKVEEIA 161 HSP 2 Score: 36.1946 bits (82), Expect = 2.291e-36 Identity = 16/32 (50.00%), Postives = 24/32 (75.00%), Query Frame = 1 Query: 715 KCHPLXXKLIVAGASAYARLYDYERIRKVCNK 810 +C P K+I+AGASAYAR D++R R++ +K Sbjct: 163 ECKP---KMIIAGASAYARTIDFKRFREIADK 191
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_CLOK5 (Serine hydroxymethyltransferase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=glyA PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.291e-36 Identity = 76/165 (46.06%), Postives = 101/165 (61.21%), Query Frame = 2 Query: 227 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 721 L+ D +I IIE E RQ G+ELI SENFTS SVM+A+GS +TN ++EGYPG RYYGG +D AE L + R + F + VNVQ SGS +N VY ++LKP D ++ + L HGGHL+HG K+S + + Y LN T IDYD++ + A Sbjct: 6 LKNTDKDIYGIIEEEWERQKNGIELIASENFTSKSVMEAMGSFLTNKYAEGYPGKRYYGGCYIVDKAEDLARDRMKKLFNAE----HVNVQPHSGSQANMAVYMSVLKPGDTVLGMSLNHGGHLTHG-----SKVSFSGKLYNFVSYGLNSDTEIIDYDEMRELA 161 HSP 2 Score: 34.6538 bits (78), Expect = 2.291e-36 Identity = 13/25 (52.00%), Postives = 22/25 (88.00%), Query Frame = 1 Query: 736 KLIVAGASAYARLYDYERIRKVCNK 810 K+IV+GASAY R D+++IR++C++ Sbjct: 167 KMIVSGASAYPRKIDFKKIREICDE 191
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_CLOK1 (Serine hydroxymethyltransferase OS=Clostridium kluyveri (strain NBRC 12016) GN=glyA PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.291e-36 Identity = 76/165 (46.06%), Postives = 101/165 (61.21%), Query Frame = 2 Query: 227 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 721 L+ D +I IIE E RQ G+ELI SENFTS SVM+A+GS +TN ++EGYPG RYYGG +D AE L + R + F + VNVQ SGS +N VY ++LKP D ++ + L HGGHL+HG K+S + + Y LN T IDYD++ + A Sbjct: 6 LKNTDKDIYGIIEEEWERQKNGIELIASENFTSKSVMEAMGSFLTNKYAEGYPGKRYYGGCYIVDKAEDLARDRMKKLFNAE----HVNVQPHSGSQANMAVYMSVLKPGDTVLGMSLNHGGHLTHG-----SKVSFSGKLYNFVSYGLNSDTEIIDYDEMRELA 161 HSP 2 Score: 34.6538 bits (78), Expect = 2.291e-36 Identity = 13/25 (52.00%), Postives = 22/25 (88.00%), Query Frame = 1 Query: 736 KLIVAGASAYARLYDYERIRKVCNK 810 K+IV+GASAY R D+++IR++C++ Sbjct: 167 KMIVSGASAYPRKIDFKKIREICDE 191
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_ACIC1 (Serine hydroxymethyltransferase OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=glyA PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 2.417e-36 Identity = 88/238 (36.97%), Postives = 130/238 (54.62%), Query Frame = 2 Query: 221 APLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFATN-KSYNVGRMAHLXWVGCCWCHPFTFENADGVTTTLTNTSWG 931 A L DP IAD+I E+ RQ + + LIPSEN+ S +V++A G+V+TN +SEGYP RYY G ++ID E++ +RA + F +D NVQ SGSP+N +Y ALL P D +M + LP GGHL+HG+ +SA I+F ++ Y + TG ID+D++ + A + + FA A + V +AH+ + HP +AD ++TT T G Sbjct: 9 AALTATDPTIADLIRAEERRQSEKIRLIPSENYVSKAVLEATGTVLTNKYSEGYPNRRYYEGQQFIDQIETIAIERAKQLFGVD----HANVQPYSGSPANLAIYLALLSPGDTVMGMALPMGGHLTHGW-----PVSATGIWFRSVQYGVRRDTGRIDFDEVREVARRERPKVIFAGGTAIPRIIDFAAFAEIAREVNAVLVADIAHISGLVAGGVHPSPVGHADIISTTTHKTLRG 237 The following BLAST results are available for this feature:
BLAST of EY659990 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659990 ID=EY659990; Name=EY659990; organism=Citrus sinensis; type=EST; length=932bpback to top |