EY659990

Overview
NameEY659990
Unique NameEY659990
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length932
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_STAAS (Serine hydroxymethyltransferase OS=Staphylococcus aureus (strain MSSA476) GN=glyA PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.416e-30
Identity = 85/232 (36.64%), Postives = 118/232 (50.86%), Query Frame = 2 
Query:  239 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFATNKSYN-VGRMAHLXWVGCCWCHPFTFENADGVTTTLTNTSWG 931
            D  IA+ IE E  RQ   +ELI SENF S +VM+A GSV+TN ++EGYPG RYYGG E++D+ ES+   RA   F  +     VNVQ  SGS +N  VY   L+  D ++ ++L HGGHL+HG       ++    F+  + Y +++ T  I+YD++ K A                       F   A   +   +  MAH+  +     HP   E AD VTTT   T  G
Sbjct:    8 DKVIAEAIEREFQRQNSNIELIASENFVSEAVMEAQGSVLTNKYAEGYPGRRYYGGCEFVDVTESIAIDRAKALFGAE----HVNVQPHSGSQANMAVYLVALEMGDTVLGMNLSHGGHLTHG-----APVNFSGKFYNFVEYGVDKDTERINYDEVRKLALEHKPKLIVAGASAYSRTIDFKKFKEIADEVNAKLMVDMAHIAGLVAAGLHPNPVEYADFVTTTTHKTLRG 230
[Close]
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_STAAR (Serine hydroxymethyltransferase OS=Staphylococcus aureus (strain MRSA252) GN=glyA PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.416e-30
Identity = 85/232 (36.64%), Postives = 118/232 (50.86%), Query Frame = 2 
Query:  239 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFATNKSYN-VGRMAHLXWVGCCWCHPFTFENADGVTTTLTNTSWG 931
            D  IA+ IE E  RQ   +ELI SENF S +VM+A GSV+TN ++EGYPG RYYGG E++D+ ES+   RA   F  +     VNVQ  SGS +N  VY   L+  D ++ ++L HGGHL+HG       ++    F+  + Y +++ T  I+YD++ K A                       F   A   +   +  MAH+  +     HP   E AD VTTT   T  G
Sbjct:    8 DKVIAEAIEREFQRQNSNIELIASENFVSEAVMEAQGSVLTNKYAEGYPGRRYYGGCEFVDVTESIAIDRAKALFGAE----HVNVQPHSGSQANMAVYLVALEMGDTVLGMNLSHGGHLTHG-----APVNFSGKFYNFVEYGVDKDTERINYDEVRKLALEHKPKLIVAGASAYSRTIDFKKFKEIADEVNAKLMVDMAHIAGLVAAGLHPNPVEYADFVTTTTHKTLRG 230
[Close]
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_STAAN (Serine hydroxymethyltransferase OS=Staphylococcus aureus (strain N315) GN=glyA PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.416e-30
Identity = 85/232 (36.64%), Postives = 118/232 (50.86%), Query Frame = 2 
Query:  239 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFATNKSYN-VGRMAHLXWVGCCWCHPFTFENADGVTTTLTNTSWG 931
            D  IA+ IE E  RQ   +ELI SENF S +VM+A GSV+TN ++EGYPG RYYGG E++D+ ES+   RA   F  +     VNVQ  SGS +N  VY   L+  D ++ ++L HGGHL+HG       ++    F+  + Y +++ T  I+YD++ K A                       F   A   +   +  MAH+  +     HP   E AD VTTT   T  G
Sbjct:    8 DKVIAEAIEREFQRQNSNIELIASENFVSEAVMEAQGSVLTNKYAEGYPGRRYYGGCEFVDVTESIAIDRAKALFGAE----HVNVQPHSGSQANMAVYLVALEMGDTVLGMNLSHGGHLTHG-----APVNFSGKFYNFVEYGVDKDTERINYDEVRKLALEHKPKLIVAGASAYSRTIDFKKFKEIADEVNAKLMVDMAHIAGLVAAGLHPNPVEYADFVTTTTHKTLRG 230
[Close]
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_STAAM (Serine hydroxymethyltransferase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=glyA PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.416e-30
Identity = 85/232 (36.64%), Postives = 118/232 (50.86%), Query Frame = 2 
Query:  239 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFATNKSYN-VGRMAHLXWVGCCWCHPFTFENADGVTTTLTNTSWG 931
            D  IA+ IE E  RQ   +ELI SENF S +VM+A GSV+TN ++EGYPG RYYGG E++D+ ES+   RA   F  +     VNVQ  SGS +N  VY   L+  D ++ ++L HGGHL+HG       ++    F+  + Y +++ T  I+YD++ K A                       F   A   +   +  MAH+  +     HP   E AD VTTT   T  G
Sbjct:    8 DKVIAEAIEREFQRQNSNIELIASENFVSEAVMEAQGSVLTNKYAEGYPGRRYYGGCEFVDVTESIAIDRAKALFGAE----HVNVQPHSGSQANMAVYLVALEMGDTVLGMNLSHGGHLTHG-----APVNFSGKFYNFVEYGVDKDTERINYDEVRKLALEHKPKLIVAGASAYSRTIDFKKFKEIADEVNAKLMVDMAHIAGLVAAGLHPNPVEYADFVTTTTHKTLRG 230
[Close]
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_STAAE (Serine hydroxymethyltransferase OS=Staphylococcus aureus (strain Newman) GN=glyA PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.416e-30
Identity = 85/232 (36.64%), Postives = 118/232 (50.86%), Query Frame = 2 
Query:  239 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFATNKSYN-VGRMAHLXWVGCCWCHPFTFENADGVTTTLTNTSWG 931
            D  IA+ IE E  RQ   +ELI SENF S +VM+A GSV+TN ++EGYPG RYYGG E++D+ ES+   RA   F  +     VNVQ  SGS +N  VY   L+  D ++ ++L HGGHL+HG       ++    F+  + Y +++ T  I+YD++ K A                       F   A   +   +  MAH+  +     HP   E AD VTTT   T  G
Sbjct:    8 DKVIAEAIEREFQRQNSNIELIASENFVSEAVMEAQGSVLTNKYAEGYPGRRYYGGCEFVDVTESIAIDRAKALFGAE----HVNVQPHSGSQANMAVYLVALEMGDTVLGMNLSHGGHLTHG-----APVNFSGKFYNFVEYGVDKDTERINYDEVRKLALEHKPKLIVAGASAYSRTIDFKKFKEIADEVNAKLMVDMAHIAGLVAAGLHPNPVEYADFVTTTTHKTLRG 230
[Close]
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_STAAC (Serine hydroxymethyltransferase OS=Staphylococcus aureus (strain COL) GN=glyA PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.416e-30
Identity = 85/232 (36.64%), Postives = 118/232 (50.86%), Query Frame = 2 
Query:  239 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFATNKSYN-VGRMAHLXWVGCCWCHPFTFENADGVTTTLTNTSWG 931
            D  IA+ IE E  RQ   +ELI SENF S +VM+A GSV+TN ++EGYPG RYYGG E++D+ ES+   RA   F  +     VNVQ  SGS +N  VY   L+  D ++ ++L HGGHL+HG       ++    F+  + Y +++ T  I+YD++ K A                       F   A   +   +  MAH+  +     HP   E AD VTTT   T  G
Sbjct:    8 DKVIAEAIEREFQRQNSNIELIASENFVSEAVMEAQGSVLTNKYAEGYPGRRYYGGCEFVDVTESIAIDRAKALFGAE----HVNVQPHSGSQANMAVYLVALEMGDTVLGMNLSHGGHLTHG-----APVNFSGKFYNFVEYGVDKDTERINYDEVRKLALEHKPKLIVAGASAYSRTIDFKKFKEIADEVNAKLMVDMAHIAGLVAAGLHPNPVEYADFVTTTTHKTLRG 230
[Close]
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_STAA9 (Serine hydroxymethyltransferase OS=Staphylococcus aureus (strain JH9) GN=glyA PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.416e-30
Identity = 85/232 (36.64%), Postives = 118/232 (50.86%), Query Frame = 2 
Query:  239 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFATNKSYN-VGRMAHLXWVGCCWCHPFTFENADGVTTTLTNTSWG 931
            D  IA+ IE E  RQ   +ELI SENF S +VM+A GSV+TN ++EGYPG RYYGG E++D+ ES+   RA   F  +     VNVQ  SGS +N  VY   L+  D ++ ++L HGGHL+HG       ++    F+  + Y +++ T  I+YD++ K A                       F   A   +   +  MAH+  +     HP   E AD VTTT   T  G
Sbjct:    8 DKVIAEAIEREFQRQNSNIELIASENFVSEAVMEAQGSVLTNKYAEGYPGRRYYGGCEFVDVTESIAIDRAKALFGAE----HVNVQPHSGSQANMAVYLVALEMGDTVLGMNLSHGGHLTHG-----APVNFSGKFYNFVEYGVDKDTERINYDEVRKLALEHKPKLIVAGASAYSRTIDFKKFKEIADEVNAKLMVDMAHIAGLVAAGLHPNPVEYADFVTTTTHKTLRG 230
[Close]
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_STAA8 (Serine hydroxymethyltransferase OS=Staphylococcus aureus (strain NCTC 8325) GN=glyA PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.416e-30
Identity = 85/232 (36.64%), Postives = 118/232 (50.86%), Query Frame = 2 
Query:  239 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFATNKSYN-VGRMAHLXWVGCCWCHPFTFENADGVTTTLTNTSWG 931
            D  IA+ IE E  RQ   +ELI SENF S +VM+A GSV+TN ++EGYPG RYYGG E++D+ ES+   RA   F  +     VNVQ  SGS +N  VY   L+  D ++ ++L HGGHL+HG       ++    F+  + Y +++ T  I+YD++ K A                       F   A   +   +  MAH+  +     HP   E AD VTTT   T  G
Sbjct:    8 DKVIAEAIEREFQRQNSNIELIASENFVSEAVMEAQGSVLTNKYAEGYPGRRYYGGCEFVDVTESIAIDRAKALFGAE----HVNVQPHSGSQANMAVYLVALEMGDTVLGMNLSHGGHLTHG-----APVNFSGKFYNFVEYGVDKDTERINYDEVRKLALEHKPKLIVAGASAYSRTIDFKKFKEIADEVNAKLMVDMAHIAGLVAAGLHPNPVEYADFVTTTTHKTLRG 230
[Close]
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_STAA2 (Serine hydroxymethyltransferase OS=Staphylococcus aureus (strain JH1) GN=glyA PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.416e-30
Identity = 85/232 (36.64%), Postives = 118/232 (50.86%), Query Frame = 2 
Query:  239 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFATNKSYN-VGRMAHLXWVGCCWCHPFTFENADGVTTTLTNTSWG 931
            D  IA+ IE E  RQ   +ELI SENF S +VM+A GSV+TN ++EGYPG RYYGG E++D+ ES+   RA   F  +     VNVQ  SGS +N  VY   L+  D ++ ++L HGGHL+HG       ++    F+  + Y +++ T  I+YD++ K A                       F   A   +   +  MAH+  +     HP   E AD VTTT   T  G
Sbjct:    8 DKVIAEAIEREFQRQNSNIELIASENFVSEAVMEAQGSVLTNKYAEGYPGRRYYGGCEFVDVTESIAIDRAKALFGAE----HVNVQPHSGSQANMAVYLVALEMGDTVLGMNLSHGGHLTHG-----APVNFSGKFYNFVEYGVDKDTERINYDEVRKLALEHKPKLIVAGASAYSRTIDFKKFKEIADEVNAKLMVDMAHIAGLVAAGLHPNPVEYADFVTTTTHKTLRG 230
[Close]
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_STAA1 (Serine hydroxymethyltransferase OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=glyA PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.416e-30
Identity = 85/232 (36.64%), Postives = 118/232 (50.86%), Query Frame = 2 
Query:  239 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFATNKSYN-VGRMAHLXWVGCCWCHPFTFENADGVTTTLTNTSWG 931
            D  IA+ IE E  RQ   +ELI SENF S +VM+A GSV+TN ++EGYPG RYYGG E++D+ ES+   RA   F  +     VNVQ  SGS +N  VY   L+  D ++ ++L HGGHL+HG       ++    F+  + Y +++ T  I+YD++ K A                       F   A   +   +  MAH+  +     HP   E AD VTTT   T  G
Sbjct:    8 DKVIAEAIEREFQRQNSNIELIASENFVSEAVMEAQGSVLTNKYAEGYPGRRYYGGCEFVDVTESIAIDRAKALFGAE----HVNVQPHSGSQANMAVYLVALEMGDTVLGMNLSHGGHLTHG-----APVNFSGKFYNFVEYGVDKDTERINYDEVRKLALEHKPKLIVAGASAYSRTIDFKKFKEIADEVNAKLMVDMAHIAGLVAAGLHPNPVEYADFVTTTTHKTLRG 230
The following BLAST results are available for this feature:
BLAST of EY659990 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GLYA_STAAS4.416e-3036.64Serine hydroxymethyltransferase OS=Staphylococcus ... [more]
GLYA_STAAR4.416e-3036.64Serine hydroxymethyltransferase OS=Staphylococcus ... [more]
GLYA_STAAN4.416e-3036.64Serine hydroxymethyltransferase OS=Staphylococcus ... [more]
GLYA_STAAM4.416e-3036.64Serine hydroxymethyltransferase OS=Staphylococcus ... [more]
GLYA_STAAE4.416e-3036.64Serine hydroxymethyltransferase OS=Staphylococcus ... [more]
GLYA_STAAC4.416e-3036.64Serine hydroxymethyltransferase OS=Staphylococcus ... [more]
GLYA_STAA94.416e-3036.64Serine hydroxymethyltransferase OS=Staphylococcus ... [more]
GLYA_STAA84.416e-3036.64Serine hydroxymethyltransferase OS=Staphylococcus ... [more]
GLYA_STAA24.416e-3036.64Serine hydroxymethyltransferase OS=Staphylococcus ... [more]
GLYA_STAA14.416e-3036.64Serine hydroxymethyltransferase OS=Staphylococcus ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-017-C10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659990 ID=EY659990; Name=EY659990; organism=Citrus sinensis; type=EST; length=932bp
ATGGACGCCTGAGGACCGGTCCGGAATTCTTCAACACCGGGCGCGTNCGG
NGAGAACTAACATAGAAAGGGCTCTGGNTCTTCGCAGGCTCTCATCTTCC
CTCGACAAACCCTCTCGTCCTCTCTTCAATGGCTCCTCCCTCTACTACAT
GTCATCTTTGCCAAATGAAGCTGTTTACGAGAAAGAGAAAAATGGTGTCA
CTTGGCCAAAACAACTGAATGCTCCACTTGAGGTCGTTGATCCTGAGATT
GCTGACATTATCGAGCATGAAAAAGCACGACAATGGAAGGGACTTGAACT
CATTCCTTCAGAGAACTTTACTTCAGTATCCGTGATGCAAGCTGTGGGGT
CTGTCATGACCAACAACCACAGTGAAGGATATCCAGGTGCAAGATATTAT
GGAGGAAACGAGTATATTGACATGGCGGAATCCTTATGTCAGAAGCGAGC
TCTGGAAGCATTTCGGTTGGATCCTGAAAAATGGGGAGTGAATGTGCAGT
CTCTGTCTGGATCTCCATCTAATTTTCAAGTCTACACTGCATTGTTAAAA
CCTCATGATAGGATCATGGCACTTGATCTTCCTCATGGTGGGCATCTCTC
ACACGGCTATCAGACAGATACCAAAAAGATATCTGCAGTGTCCATATTTT
TTGAGACAATGCCATACAGATTGAATGAGAGCACTGGCTATATAGACTAT
GACCAGTTGGAGAAAAGTGCCACCCTCTTCANGNCAAATTGATTGTTGCT
GGTGCTAGTGCTTATGCACGATTGTACGATTATGAGCGTATTCGCAAGGT
TTGCAACAAACAAAAGCTATAATGTTGGCAGAATGGCACACCTTAANTGG
GTTGGGTGCTGCTGGTGCCATCCCTTCACTTTTGAGAATGCAGATGGTGT
GACCACAACACTCACAAACACTTCCTGGGGCA
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