EY659990
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA1_MYCTU (Serine hydroxymethyltransferase 1 OS=Mycobacterium tuberculosis GN=glyA1 PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 5.767e-30 Identity = 84/240 (35.00%), Postives = 125/240 (52.08%), Query Frame = 2 Query: 215 LNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFATNKSYN-VGRMAHLXWVGCCWCHPFTFENADGVTTTLTNTSWG 931 ++APL VDP+IA+++ E RQ LE+I SENF +V+QA GSV+TN ++EG PG RYYGG E++D+ E+L + RA F + NVQ SG+ +N V AL+ P +R++ LDL +GGHL+HG +++ +E Y ++ +T ID D + +A F + F A + MAH + HP +AD V+TT+ T G Sbjct: 1 MSAPLAEVDPDIAELLAKELGRQRDTLEMIASENFVPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKALFGAE----FANVQPHSGAQANAAVLHALMSPGERLLGLDLANGGHLTHG-----MRLNFSGKLYENGFYGVDPATHLIDMDAVRATALEFRPKVIIAGWSAYPRVLDFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPVPHADVVSTTVHKTLGG 231
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA1_MYCBO (Serine hydroxymethyltransferase 1 OS=Mycobacterium bovis GN=glyA1 PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 5.767e-30 Identity = 84/240 (35.00%), Postives = 125/240 (52.08%), Query Frame = 2 Query: 215 LNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFATNKSYN-VGRMAHLXWVGCCWCHPFTFENADGVTTTLTNTSWG 931 ++APL VDP+IA+++ E RQ LE+I SENF +V+QA GSV+TN ++EG PG RYYGG E++D+ E+L + RA F + NVQ SG+ +N V AL+ P +R++ LDL +GGHL+HG +++ +E Y ++ +T ID D + +A F + F A + MAH + HP +AD V+TT+ T G Sbjct: 1 MSAPLAEVDPDIAELLAKELGRQRDTLEMIASENFAPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKALFGAE----FANVQPHSGAQANAAVLHALMSPGERLLGLDLANGGHLTHG-----MRLNFSGKLYENGFYGVDPATHLIDMDAVRATALEFRPKVIIAGWSAYPRVLDFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPVPHADVVSTTVHKTLGG 231
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_GRABC (Serine hydroxymethyltransferase OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=glyA PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 6.091e-30 Identity = 68/167 (40.72%), Postives = 96/167 (57.49%), Query Frame = 2 Query: 221 APLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 721 A L DP++ +E E RQ G+ELI SEN S +V++A GSV+TN ++EGYPG RYYGG +D+AE L RA + F + NVQ SG+ +N V+ AL KP D I+ + L GGHL+HG + +F + Y + + G +DY++LE A Sbjct: 12 ARLADTDPDLFAALEKEFHRQEDGIELIASENIVSAAVLEAQGSVLTNKYAEGYPGKRYYGGCAAVDIAEQLAIDRAKQLFGCE----FANVQPHSGAQANGAVFFALAKPGDTILGMSLAAGGHLTHGAAP-----TVSGKWFNAVQYGVRKEDGLLDYEELEALA 169 HSP 2 Score: 33.4982 bits (75), Expect = 6.091e-30 Identity = 14/25 (56.00%), Postives = 19/25 (76.00%), Query Frame = 1 Query: 736 KLIVAGASAYARLYDYERIRKVCNK 810 K+I+AG SAY R D+ RIRKV ++ Sbjct: 175 KIIIAGGSAYPRFIDFPRIRKVADE 199
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_CAMC1 (Serine hydroxymethyltransferase OS=Campylobacter concisus (strain 13826) GN=glyA PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 6.095e-30 Identity = 70/161 (43.48%), Postives = 98/161 (60.87%), Query Frame = 2 Query: 227 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQL 709 L+ D +I D++ E RQ LE+I SENFT VM+ +GS++TN ++EGYPG RYYGG E++D E + R E F + NVQ SGS +N VY ALL P D+I+ +DL HGGHL+HG K+S+ +E+ Y + E G I+YD++ Sbjct: 3 LQSYDKDIYDLVNLELKRQCDHLEMIASENFTYPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIEQIAIDRCKELFGCE----FANVQPNSGSQANQGVYGALLNPGDKILGMDLSHGGHLTHG-----AKVSSSGKMYESFFYGV-ELDGRINYDRV 153 HSP 2 Score: 27.335 bits (59), Expect = 6.095e-30 Identity = 10/24 (41.67%), Postives = 18/24 (75.00%), Query Frame = 1 Query: 736 KLIVAGASAYARLYDYERIRKVCN 807 K+IV GASAY R ++++ R++ + Sbjct: 163 KMIVCGASAYTREIEFKKFREIAD 186
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_PROM9 (Serine hydroxymethyltransferase OS=Prochlorococcus marinus (strain MIT 9312) GN=glyA PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 7.532e-30 Identity = 84/236 (35.59%), Postives = 122/236 (51.69%), Query Frame = 2 Query: 227 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFATN-KSYNVGRMAHLXWVGCCWCHPFTFENADGVTTTLTNTSWG 931 L+ DP I++ I EK RQ LELI SENF S++VMQA GSV+TN ++EG P RYYGG E++D E L +RA + F + W NVQ SG+ +N V+ +LL+P D IM +DL HGGHL+HG ++ +F + Y +N+ T +++D++ + A F A ++ + +AH+ + HP D VTTT T G Sbjct: 7 LKKSDPVISNFINSEKNRQETHLELIASENFASIAVMQAQGSVLTNKYAEGLPQKRYYGGCEFVDEIEELAIQRAKKLFNAN---W-ANVQPHSGAQANAAVFLSLLQPGDTIMGMDLSHGGHLTHG-----SPVNMSGKWFNAVHYGVNKETSELNFDEIREIALETKPKLIICGYSAYPRTIDFESFRNIADEVGAFLMADIAHIAGLVASKLHPNPLPYCDVVTTTTHKTLRG 233
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_OCEIH (Serine hydroxymethyltransferase OS=Oceanobacillus iheyensis GN=glyA PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 7.532e-30 Identity = 80/232 (34.48%), Postives = 123/232 (53.02%), Query Frame = 2 Query: 239 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFA-TNKSYNVGRMAHLXWVGCCWCHPFTFENADGVTTTLTNTSWG 931 D E+ + ++ EK RQ +ELI SENF + +VM A+GS++TN ++EGYPG RYYGG E++D+ E+L + RA E F D NVQ SG+ +N VY+A+L+P D ++ ++L HGGHL+HG ++ + + Y +++ T +DYD + + A + F A +Y + MAH+ + H +AD VTTT T G Sbjct: 8 DTEVFEAMQAEKNRQQDKIELIASENFVTKAVMDAMGSILTNKYAEGYPGKRYYGGCEHVDVVENLARDRAKELFGAD----HANVQPHSGAQANMAVYSAVLEPGDTVLGMNLNHGGHLTHG-----SPVNFSGQLYNFVDYGVDKETEQLDYDAVLEKAKEVKPKLIVAGASAYSRSINFAKFREIADAVDAYLMVDMAHIAGLVATGEHENPVPHADFVTTTTHKTLRG 230
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_NITEU (Serine hydroxymethyltransferase OS=Nitrosomonas europaea GN=glyA PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 7.532e-30 Identity = 86/236 (36.44%), Postives = 118/236 (50.00%), Query Frame = 2 Query: 227 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFATN-KSYNVGRMAHLXWVGCCWCHPFTFENADGVTTTLTNTSWG 931 +E VDP++ I+ E RQ +ELI SEN+ S +V+QA G+V+TN ++EGYPG RYYGG Y+D+ E L R F + VNVQ SGS +N VY + LKP D ++ + L HGGHL+HG ++ F ++ Y LN T IDY +LE+ A F + A N +Y MAH + +P AD VT+T T G Sbjct: 8 IEQVDPDLWQAIKGEVQRQEDHIELIASENYASPAVLQAQGTVLTNKYAEGYPGKRYYGGCRYVDIVEQLAIDRLRNLFNAE----YVNVQPHSGSQANAAVYLSALKPGDTLLGMSLAHGGHLTHG-----SAVNMSGKIFNSISYGLNPETEEIDYAELERLAHEHKPRMIVAGASSYARVIDWKAFRQIADNVGAYLFVDMAHYAGLIAAGYYPNPVGIADFVTSTTHKTLRG 234
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_LEUMM (Serine hydroxymethyltransferase OS=Leuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / NCDO 523) GN=glyA PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 7.532e-30 Identity = 86/233 (36.91%), Postives = 115/233 (49.36%), Query Frame = 2 Query: 236 VDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFATN-KSYNVGRMAHLXWVGCCWCHPFTFENADGVTTTLTNTSWG 931 +DP + I+ E ARQ + +ELI SENFTS +V A GSV+TN ++EGYP RYYGG EY+D+ E + R E F + NVQ SGS +N Y A LKP D+I+ + L GGHL+HG K+S +E+ Y LN T +DY+ + K A F A +Y + MAH+ + HP AD VT+T T G Sbjct: 6 LDPIVWSAIQQESARQNRTIELIASENFTSQAVRAAQGSVLTNKYAEGYPYKRYYGGTEYVDVVEQVAIDRLKELFGAE----YANVQPHSGSQANAAAYMAFLKPGDKILGMSLDAGGHLTHG-----AKVSFSGKVYESHTYGLNSETETLDYEAIAKQAREVKPQMIVAGASAYSRIIEFDKFRAIADEVGAYLMVDMAHIAGLVAAGLHPNPVGIADVVTSTTHKTLRG 229
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_GLOVI (Serine hydroxymethyltransferase OS=Gloeobacter violaceus GN=gylA PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 7.532e-30 Identity = 84/236 (35.59%), Postives = 118/236 (50.00%), Query Frame = 2 Query: 227 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFATN-KSYNVGRMAHLXWVGCCWCHPFTFENADGVTTTLTNTSWG 931 L DP +A I+ E RQ LELI SENFTS +VM A GSV+TN ++EG P RYYGG E++D E + RA F NVQ SG+ +N V+ ALL+ D+I+ +DL HGGHL+HG ++ I+FE + Y ++ ++ ID+DQ+ + A F A +Y + +AH+ + HP + D VTTT T G Sbjct: 8 LRATDPLVAGWIDRELNRQRSHLELIASENFTSAAVMAAQGSVLTNKYAEGLPSKRYYGGCEFVDAVEQIAIDRAKALFGAA----HANVQPHSGAQANAAVFLALLERGDKILGMDLSHGGHLTHG-----SPVNQSGIYFEALHYGVDPASHRIDFDQVRELAHAHRPKLIICGYSAYPRVIDFECFREIADEVGAYLLADIAHIAGLVVAGVHPNPIPHCDVVTTTTHKTLRG 234
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_BUCAI (Serine hydroxymethyltransferase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=glyA PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 7.532e-30 Identity = 86/232 (37.07%), Postives = 118/232 (50.86%), Query Frame = 2 Query: 239 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFATN-KSYNVGRMAHLXWVGCCWCHPFTFENADGVTTTLTNTSWG 931 DP++ IE EK RQ +ELI SEN+TS VM GS +TN ++EGYPG RYYGG EY+D+ E L +RA + F D NVQ SGS +NF VYTALL P D I+ + L HGGHL+HG ++ + + Y ++E+ G I+Y++L + + A N +Y V MAH+ + +P A VT+T T G Sbjct: 12 DPKLWFAIEQEKKRQENHIELIASENYTSNYVMDVQGSQLTNKYAEGYPGKRYYGGCEYVDIIEELAIERAKKLFNAD----YANVQPHSGSQANFSVYTALLNPGDTILGMKLSHGGHLTHG-----SSVNFSGKMYNVISYGVDEN-GEINYEELLRLTKKYKPKMIIGGFSAYSGICNWKKMRFIADNADAYFVVDMAHVAGLVAAGIYPNPINYAHVVTSTTHKTLAG 233 The following BLAST results are available for this feature:
BLAST of EY659990 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659990 ID=EY659990; Name=EY659990; organism=Citrus sinensis; type=EST; length=932bpback to top |