EY659990
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_ACIC5 (Serine hydroxymethyltransferase OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) GN=glyA PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 2.983e-36 Identity = 73/170 (42.94%), Postives = 106/170 (62.35%), Query Frame = 2 Query: 212 QLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 721 +++ L DP++A I+HE RQ +GLE+I SENF S +V++A GSV TN ++EGYPG RYYGG E+ D+ E+L + RA + F + NVQ SGS +N Y ++++P D I+ LDL HGGHL+HG+ K++ + Y + + T IDYD+LE A Sbjct: 4 RMSLSLAQSDPDVAAAIDHEVLRQHEGLEMIASENFVSRAVLEAAGSVFTNKYAEGYPGRRYYGGCEFADVVENLARDRAKQLFGAE----HANVQPHSGSQANAAAYMSIIQPGDTILGLDLAHGGHLTHGH-----KLNFSGKLYRVASYGVRKDTETIDYDELEAIA 164 HSP 2 Score: 33.113 bits (74), Expect = 2.983e-36 Identity = 17/49 (34.69%), Postives = 26/49 (53.06%), Query Frame = 1 Query: 736 KLIVAGASAYARLYDYERIRKVCNKQKL*CWQNGTP*XGWVLLVPSLHF 882 K+I+ G SAY R++D+ R+R++ +K G LLV HF Sbjct: 170 KMIIGGGSAYPRIFDFARMRQIADK------------VGAFLLVDMAHF 206
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_CHLSY (Serine hydroxymethyltransferase OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=glyA PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 2.983e-36 Identity = 76/165 (46.06%), Postives = 102/165 (61.82%), Query Frame = 2 Query: 227 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 721 L DP IAD+IE E RQ +GLELI SEN+TS++VM+A GSV+TN ++EG PG RYYGG E++D E L +RA + F NVQ SG+ +N V+TALL+P D I+ + L HGGHL+HG ++ ++ Y ++ TG IDYD L A Sbjct: 5 LRATDPIIADLIEREAQRQRQGLELIASENYTSLAVMEAQGSVLTNKYAEGLPGRRYYGGCEFVDAIEQLAIERACQLFGTS----HANVQPHSGAQANIAVFTALLQPGDTILGMRLDHGGHLTHG-----SPVNFSGKWYNVHFYGVDAQTGQIDYDDLASKA 160 HSP 2 Score: 33.113 bits (74), Expect = 2.983e-36 Identity = 13/35 (37.14%), Postives = 23/35 (65.71%), Query Frame = 1 Query: 706 VGEKCHPLXXKLIVAGASAYARLYDYERIRKVCNK 810 + K + KLI +GASAY R+ D+ R+R++ ++ Sbjct: 156 LASKARAIRPKLITSGASAYPRIIDFARMRQIADE 190
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_DESAP (Serine hydroxymethyltransferase OS=Desulforudis audaxviator (strain MP104C) GN=glyA PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 3.887e-36 Identity = 81/168 (48.21%), Postives = 102/168 (60.71%), Query Frame = 2 Query: 218 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 721 N L DPEIA I E RQ LELI SENF S +V++A GSV+TN ++EGYPGARYYGG EY+D+ ES+ +RA E F NVQ SG+ +N Y A L+P D IM + L HGGHL+HG KI+ +F +PY + E TG IDYD++ A Sbjct: 4 NRSLAETDPEIARAIALEITRQGAKLELIASENFVSRAVLEAQGSVLTNKYAEGYPGARYYGGCEYVDIVESVAIRRAKEIFGAG----HANVQPHSGAQANMAAYFAFLEPGDTIMGMRLAHGGHLTHG-----AKINFSGRYFRYVPYGVEEETGRIDYDRMHAIA 162 HSP 2 Score: 29.261 bits (64), Expect = 3.887e-36 Identity = 13/24 (54.17%), Postives = 17/24 (70.83%), Query Frame = 1 Query: 736 KLIVAGASAYARLYDYERIRKVCN 807 KLIV GASAY R D+ R+R + + Sbjct: 168 KLIVGGASAYPRELDFARMRAIAD 191
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_SYNWW (Serine hydroxymethyltransferase OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=glyA PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 3.887e-36 Identity = 78/162 (48.15%), Postives = 102/162 (62.96%), Query Frame = 2 Query: 236 VDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 721 VDPE+A+ IE E+ARQ LELI SENF S +VM A GSVMTN ++EG PGARYYGG EY+D+ E L + R E F + NVQ SG+ +N VY A L+P IM ++L HGGHL+HG K++ +F + Y +N T IDY++L + A Sbjct: 11 VDPEVAEAIEKEEARQNNKLELIASENFVSRAVMAAQGSVMTNKYAEGLPGARYYGGCEYVDIVEELARDRVKEIFGAE----HANVQPHSGAQANTAVYFAALQPGQTIMGMNLNHGGHLTHG-----SKVNISGKYFNIVDYGVNRDTERIDYEELREIA 163 HSP 2 Score: 30.8018 bits (68), Expect = 3.887e-36 Identity = 11/25 (44.00%), Postives = 21/25 (84.00%), Query Frame = 1 Query: 736 KLIVAGASAYARLYDYERIRKVCNK 810 ++IVAGASAY R+ D+++ R++ ++ Sbjct: 169 QMIVAGASAYPRILDFKKFREIADE 193
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_CHLPD (Serine hydroxymethyltransferase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=glyA PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 5.059e-36 Identity = 78/165 (47.27%), Postives = 105/165 (63.64%), Query Frame = 2 Query: 227 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 721 L++ D E+ + + +E RQ + LELI SENFTS +VMQA GSVMTN ++EGYPG RYYGG E++D+AE+L + RA + F VNVQ SGS +N V ++LKP DRIM LDL HGGHL+HG ++ +E Y + TG ID + +E+ A Sbjct: 6 LQMQDKEVFEAVVNETVRQTETLELIASENFTSRAVMQACGSVMTNKYAEGYPGKRYYGGCEFVDVAENLARDRAKKLFNCS----YVNVQPHSGSSANMAVLFSVLKPGDRIMGLDLSHGGHLTHG-----SPVNFSGQLYEAHSYGVRRETGCIDMNMVEELA 161 HSP 2 Score: 30.4166 bits (67), Expect = 5.059e-36 Identity = 12/35 (34.29%), Postives = 24/35 (68.57%), Query Frame = 1 Query: 706 VGEKCHPLXXKLIVAGASAYARLYDYERIRKVCNK 810 V E + + KLI+ GASAY++ +D++ R++ ++ Sbjct: 157 VEELANKVRPKLIICGASAYSQGFDFKAFREIADR 191
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_CHLPB (Serine hydroxymethyltransferase OS=Chlorobium phaeobacteroides (strain BS1) GN=glyA PE=3 SV=2) HSP 1 Score: 142.895 bits (359), Expect = 5.059e-36 Identity = 82/165 (49.70%), Postives = 105/165 (63.64%), Query Frame = 2 Query: 227 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 721 L+ D I D I E RQ + LELI SENF S +VM+A GSVMTN ++EGYPG RYYGG E++D+AE+L + RA + F D VNVQ SGS +N V A+LKP DRIM LDL HGGHL+HG K++ FE Y ++ TG ID +++E+ A Sbjct: 6 LQRQDKGIFDAITAEVRRQTETLELIASENFASRAVMEACGSVMTNKYAEGYPGKRYYGGCEFVDIAENLARDRAKKLFGCD----YVNVQPHSGSSANMGVLFAVLKPGDRIMGLDLSHGGHLTHG-----SKVNFSGQLFEAHSYGVDRETGCIDMNKVEEMA 161 HSP 2 Score: 30.0314 bits (66), Expect = 5.059e-36 Identity = 14/35 (40.00%), Postives = 22/35 (62.86%), Query Frame = 1 Query: 706 VGEKCHPLXXKLIVAGASAYARLYDYERIRKVCNK 810 V E + KLI+ GASAY++ +D++ R V +K Sbjct: 157 VEEMALEVRPKLIICGASAYSQGFDFKAFRDVADK 191
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_PORGI (Serine hydroxymethyltransferase OS=Porphyromonas gingivalis GN=glyA PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 5.061e-36 Identity = 75/161 (46.58%), Postives = 98/161 (60.87%), Query Frame = 2 Query: 239 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 721 D I D+IE E RQ KG+ELI SENF S VMQA+GS MTN ++EGYPG RYYGG E +D +E + R + + + W NVQ SG+ +N V A L+ D M L+L HGGHLSHG +++ I + + Y L+E TG +DYD +EK A Sbjct: 4 DSVIFDLIEKEHQRQLKGIELIASENFVSEQVMQAMGSCMTNKYAEGYPGKRYYGGCEVVDQSEQIAIDRIKQLYGAE---W-ANVQPHSGAQANMAVLLACLEAGDTFMGLNLEHGGHLSHG-----SLVNSSGILYRPIGYNLSEETGMVDYDHMEKMA 155 HSP 2 Score: 34.2686 bits (77), Expect = 5.061e-36 Identity = 13/25 (52.00%), Postives = 21/25 (84.00%), Query Frame = 1 Query: 736 KLIVAGASAYARLYDYERIRKVCNK 810 KLI+ G SAY+R +DY+R+R++ +K Sbjct: 161 KLIIGGGSAYSREWDYKRMREIADK 185
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_PORG3 (Serine hydroxymethyltransferase OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=glyA PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 5.061e-36 Identity = 75/161 (46.58%), Postives = 98/161 (60.87%), Query Frame = 2 Query: 239 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 721 D I D+IE E RQ KG+ELI SENF S VMQA+GS MTN ++EGYPG RYYGG E +D +E + R + + + W NVQ SG+ +N V A L+ D M L+L HGGHLSHG +++ I + + Y L+E TG +DYD +EK A Sbjct: 4 DSVIFDLIEKEHQRQLKGIELIASENFVSEQVMQAMGSCMTNKYAEGYPGKRYYGGCEVVDQSEQIAIDRIKQLYGAE---W-ANVQPHSGAQANMAVLLACLEAGDTFMGLNLEHGGHLSHG-----SLVNSSGILYRPIGYNLSEETGMVDYDHMEKMA 155 HSP 2 Score: 34.2686 bits (77), Expect = 5.061e-36 Identity = 13/25 (52.00%), Postives = 21/25 (84.00%), Query Frame = 1 Query: 736 KLIVAGASAYARLYDYERIRKVCNK 810 KLI+ G SAY+R +DY+R+R++ +K Sbjct: 161 KLIIGGGSAYSREWDYKRMREIADK 185
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_CHLAD (Serine hydroxymethyltransferase OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=glyA PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 5.063e-36 Identity = 76/165 (46.06%), Postives = 101/165 (61.21%), Query Frame = 2 Query: 227 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 721 L DP IAD+IE E RQ +GLELI SEN+TS++VM+A GSV+TN ++EG PG RYYGG E++D E L RA + F NVQ SG+ +N V+TALL+P D I+ + L HGGHL+HG ++ ++ Y ++ TG IDYD L A Sbjct: 5 LRATDPIIADLIEREAQRQRQGLELIASENYTSLAVMEAQGSVLTNKYAEGLPGRRYYGGCEFVDAIEQLAIDRACQLFGTS----HANVQPHSGAQANIAVFTALLQPGDTILGMRLDHGGHLTHG-----SPVNFSGKWYNVHFYGVDPQTGQIDYDDLAAKA 160 HSP 2 Score: 33.4982 bits (75), Expect = 5.063e-36 Identity = 14/32 (43.75%), Postives = 22/32 (68.75%), Query Frame = 1 Query: 715 KCHPLXXKLIVAGASAYARLYDYERIRKVCNK 810 K + KLI +GASAY RL D+ R+R++ ++ Sbjct: 159 KARAIRPKLITSGASAYPRLIDFARMRQIADE 190
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_OENOB (Serine hydroxymethyltransferase OS=Oenococcus oeni (strain BAA-331 / PSU-1) GN=glyA PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 7.033e-36 Identity = 90/233 (38.63%), Postives = 124/233 (53.22%), Query Frame = 2 Query: 236 VDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFATN-KSYNVGRMAHLXWVGCCWCHPFTFENADGVTTTLTNTSWG 931 +DP++A + E+ RQ +EL+ SENF S +V QA GSV+TN +SEGYPG RYYGGNEYID+AE+L +RA E F + NVQ SGS +NF+ Y A L P D+I+ ++L GGHL+HG +S +E Y+++ T +DYD + K A F N F A +Y + +AH+ + HP AD +TTT T G Sbjct: 6 LDPQLAKAVSGEEERQRHNIELVASENFVSKAVRQAQGSVLTNKYSEGYPGKRYYGGNEYIDIAENLAIERAKELFGVS----YANVQPHSGSSANFEAYMAFLHPGDKILGMNLDSGGHLTHG-----ASVSFSGKMYEAQSYKVDSETELLDYDAILKQAKEFKPNLIIAGASAYSRTIDFQAFRDIADEVNAYLMVDIAHIAGLIAAGLHPSPVGLADIITTTTHKTLRG 229 The following BLAST results are available for this feature:
BLAST of EY659990 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659990 ID=EY659990; Name=EY659990; organism=Citrus sinensis; type=EST; length=932bpback to top |