EY659990
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_DESAA (Serine hydroxymethyltransferase OS=Desulfatibacillum alkenivorans (strain AK-01) GN=glyA PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 7.033e-36 Identity = 98/233 (42.06%), Postives = 121/233 (51.93%), Query Frame = 2 Query: 236 VDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFATNK-SYNVGRMAHLXWVGCCWCHPFTFENADGVTTTLTNTSWG 931 VDPE A IE E RQ LELI SEN S +VM A GSVMTN ++EGYPG RYYGG E++D+AE+L + RA E F+ D NVQ SGS +N VY ALL+P D ++ +DL HGGHL+HG +S F + Y + E TG IDYDQL A + A +Y + MAH+ + HP AD VTTT T G Sbjct: 9 VDPEAAKAIEQELDRQQFTLELIASENIASPAVMAAQGSVMTNKYAEGYPGHRYYGGCEFVDVAENLARDRAKELFQAD----YANVQPHSGSQANMGVYFALLEPGDTVLGMDLSHGGHLTHG-----SPVSFSGRIFNFIHYGVKEKTGTIDYDQLRSLAKEHKPKLIVAGASAYPRIIDFPELEKIARETGAYLMVDMAHIAGLVAAGEHPSPLPYADVVTTTTHKTLRG 232
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_CHLAA (Serine hydroxymethyltransferase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=glyA PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 8.589e-36 Identity = 76/165 (46.06%), Postives = 102/165 (61.82%), Query Frame = 2 Query: 227 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 721 L DP IAD+IE E RQ +GLELI SEN+TS++VM+A GSV+TN ++EG PG RYYGG E++D E L +RA + F NVQ SG+ +N V+TALL+P D I+ + L HGGHL+HG ++ ++ Y ++ TG IDYD L A Sbjct: 5 LRATDPIIADLIEREAQRQRQGLELIASENYTSLAVMEAQGSVLTNKYAEGLPGRRYYGGCEFVDAIEQLAIERACQLFGTS----HANVQPHSGAQANIAVFTALLQPGDTILGMRLDHGGHLTHG-----SPVNFSGKWYNVHFYGVDAQTGQIDYDDLASKA 160 HSP 2 Score: 31.5722 bits (70), Expect = 8.589e-36 Identity = 12/35 (34.29%), Postives = 22/35 (62.86%), Query Frame = 1 Query: 706 VGEKCHPLXXKLIVAGASAYARLYDYERIRKVCNK 810 + K + KLI +G SAY R+ D+ R+R++ ++ Sbjct: 156 LASKARAIRPKLITSGVSAYPRIIDFARMRQIADE 190
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_SYNFM (Serine hydroxymethyltransferase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=glyA PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 1.200e-35 Identity = 93/236 (39.41%), Postives = 130/236 (55.08%), Query Frame = 2 Query: 227 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFATN-KSYNVGRMAHLXWVGCCWCHPFTFENADGVTTTLTNTSWG 931 LE +DPEIAD+I E+ RQ LELI SENF S +V +A GSV+TN ++EGYPG RYYGG E++DMAE L Q+RA + F D E NVQ SGS +N ++ A+L+P D ++ +DL GGHL+HG +S + + Y + + T ID+DQ+ + A + F + A +Y + MAH+ + C HP +AD VT+T T G Sbjct: 4 LERIDPEIADVICEEEKRQRGKLELIASENFVSEAVREAQGSVLTNKYAEGYPGKRYYGGCEFVDMAERLAQERAKKLF--DAEY--ANVQPHSGSQANMAIFFAVLQPGDTVLGMDLRQGGHLTHG-----SPVSFSGKLYNVVSYGVRKDTEQIDFDQVARLAREHRPKLIIAGASAYPRIIDFARFGQIAKEIAAYLMVDMAHIAGLVCSGLHPSPVPHADFVTSTTHKTLRG 230
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_CHLCH (Serine hydroxymethyltransferase OS=Chlorobium chlorochromatii (strain CaD3) GN=glyA PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 1.457e-35 Identity = 79/165 (47.88%), Postives = 106/165 (64.24%), Query Frame = 2 Query: 227 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 721 L+ D E+ I +E RQ + LELI SENFTS +VMQA GSVMTN ++EGYPG RYYGG E++D+AE+L + RA + F + VNVQ SGS +N V ++LKP D+IM LDL HGGHL+HG ++ FE Y ++ TG ID +++E+ A Sbjct: 6 LQKQDAEVFASIANETKRQTETLELIASENFTSRAVMQACGSVMTNKYAEGYPGKRYYGGCEFVDVAENLARDRAKKLFGCE----YVNVQPHSGSSANMAVLFSVLKPGDKIMGLDLSHGGHLTHG-----SSVNFSGQMFEAHSYGVDRETGCIDMNKVEEMA 161 HSP 2 Score: 30.0314 bits (66), Expect = 1.457e-35 Identity = 13/35 (37.14%), Postives = 22/35 (62.86%), Query Frame = 1 Query: 706 VGEKCHPLXXKLIVAGASAYARLYDYERIRKVCNK 810 V E + KLI+ GASAY++ +D++ R + +K Sbjct: 157 VEEMAMQVRPKLIIGGASAYSQGFDFKAFRAIADK 191
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_GEOSL (Serine hydroxymethyltransferase OS=Geobacter sulfurreducens GN=glyA PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.567e-35 Identity = 93/237 (39.24%), Postives = 131/237 (55.27%), Query Frame = 2 Query: 227 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFATNK--SYNVGRMAHLXWVGCCWCHPFTFENADGVTTTLTNTSWG 931 LE DP++A+ I HE RQ LELI SENF S +V++A GSVMTN ++EGYPG RYYGG ++D+ E+L +RA E F D NVQ SGS +N VY ++LKP D I+ ++L HGGHL+HG ++ FF +PY +++ T ID++++E+ A L + TI R +K + + MAH+ + HP A+ VTTT T G Sbjct: 4 LETFDPQVAEAIRHETERQEYNLELIASENFVSEAVLEAQGSVMTNKYAEGYPGKRYYGGCHHVDVVENLAIERAKELFGAD----HANVQPHSGSQANMAVYFSVLKPGDTILGMNLSHGGHLTHG-----SPVNFSGRFFNVVPYGVSQETETIDFNEVERLA-LEHKPKMIVVGASAYPRTIDFAAFRIIADKVGAVIMVDMAHIAGLVAAGLHPSPVPYAEFVTTTTHKTLRG 230
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_PELPB (Serine hydroxymethyltransferase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=glyA PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.897e-35 Identity = 80/165 (48.48%), Postives = 106/165 (64.24%), Query Frame = 2 Query: 227 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 721 L+ D E+ + I E RQ + LELI SENFTS +VMQA GSVMTN ++EGYPG RYYGG E++D+AE+L + RA + F D VNVQ SGS +N V ++LKP DRIM LDL HGGHL+HG ++ +E Y ++ TG ID +++E+ A Sbjct: 6 LQKQDSELFEAIAKETGRQTETLELIASENFTSRAVMQACGSVMTNKYAEGYPGKRYYGGCEFVDIAENLARDRAKKLFGCD----YVNVQPHSGSSANMAVLFSVLKPGDRIMGLDLSHGGHLTHG-----SSVNFSGQMYEAHSYGVDRETGCIDMNKVEELA 161 HSP 2 Score: 27.335 bits (59), Expect = 1.897e-35 Identity = 11/25 (44.00%), Postives = 18/25 (72.00%), Query Frame = 1 Query: 736 KLIVAGASAYARLYDYERIRKVCNK 810 KLI+ GASAY++ +D + R + +K Sbjct: 167 KLIICGASAYSQGFDVKAFRVIADK 191
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA1_PSEPF (Serine hydroxymethyltransferase 1 OS=Pseudomonas fluorescens (strain Pf0-1) GN=glyA1 PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.899e-35 Identity = 73/165 (44.24%), Postives = 103/165 (62.42%), Query Frame = 2 Query: 227 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 721 L+ DP IA +I+ E+ RQ LELI SEN+ S V+QA GS++TN ++EGYPG RYYGG + +D E+L +RA + F + VNVQ SGS +N V+ A+L+P DRI+ + L HGGHL+HG ++ FF+ Y L + + +DYDQ+E A Sbjct: 3 LQNFDPAIARLIDRERNRQETHLELIASENYVSEEVLQAQGSLLTNKYAEGYPGRRYYGGCKVVDEIENLAIERARKLFGCE----YVNVQPHSGSQANQAVFLAVLEPGDRILGMSLAHGGHLTHG-----ASVNFSGKFFQAFTYGLEKDSETLDYDQMEDLA 158 HSP 2 Score: 37.7354 bits (86), Expect = 1.899e-35 Identity = 14/25 (56.00%), Postives = 22/25 (88.00%), Query Frame = 1 Query: 736 KLIVAGASAYARLYDYERIRKVCNK 810 K+I+AGASAY+R+ D+ R RK+C++ Sbjct: 164 KMIIAGASAYSRVIDFPRFRKICDE 188
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_DESRM (Serine hydroxymethyltransferase OS=Desulfotomaculum reducens (strain MI-1) GN=glyA PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 3.491e-35 Identity = 91/239 (38.08%), Postives = 125/239 (52.30%), Query Frame = 2 Query: 218 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFATN-KSYNVGRMAHLXWVGCCWCHPFTFENADGVTTTLTNTSWG 931 N L DPE+A IE E RQ + +ELI SENF S +V++A GS++TN ++EGYPG RYYGG E++D+AESL RA + F D NVQ SG+ +NF VY ALL+P D+I+ ++L HGGHL+HG ++ +F + Y + E TG I+Y++L + A A +Y MAH+ + H AD VTTT T G Sbjct: 3 NGKLAQTDPELAKAIELEHQRQQRNIELIASENFVSPAVLEAQGSILTNKYAEGYPGKRYYGGCEFVDIAESLAISRAKKLFGAD----HANVQPHSGAQANFAVYFALLQPGDKILGMNLAHGGHLTHG-----SPVNVSGKYFNVVAYGVEEDTGCINYEKLREIALQEKPKMIVAGASAYARAIDFKKIGEIAKEIDAYFFVDMAHIAGLVAAGLHQSPVPYADVVTTTTHKTLRG 232
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_PROVI (Serine hydroxymethyltransferase OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=glyA PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 4.192e-35 Identity = 79/165 (47.88%), Postives = 106/165 (64.24%), Query Frame = 2 Query: 227 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 721 L++ D E+ + I E RQ + LELI SENFTS +VMQA GSVMTN ++EGYPG RYYGG E++D+AE+L + RA + F + VNVQ SGS +N V ++LKP D IM LDL HGGHL+HG ++ ++ Y ++ TG ID +Q+EK A Sbjct: 6 LKMQDREVFEAIALETGRQMETLELIASENFTSRAVMQACGSVMTNKYAEGYPGKRYYGGCEFVDIAENLARDRAKKLFGCE----YVNVQPHSGSSANMAVLFSVLKPGDCIMGLDLSHGGHLTHG-----SSVNFSGQMYKAHAYGVDGETGIIDMNQVEKMA 161 HSP 2 Score: 28.8758 bits (63), Expect = 4.192e-35 Identity = 10/25 (40.00%), Postives = 20/25 (80.00%), Query Frame = 1 Query: 736 KLIVAGASAYARLYDYERIRKVCNK 810 +LI+ GASAY++ +D++ R++ +K Sbjct: 167 RLIICGASAYSQGFDFKAFREIADK 191
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_PROA2 (Serine hydroxymethyltransferase OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=glyA PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 4.192e-35 Identity = 79/165 (47.88%), Postives = 103/165 (62.42%), Query Frame = 2 Query: 227 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 721 L+ D EI D I +E RQ + LELI SENF S +VM+A GSVMTN ++EGYPG RYYGG E++D+AE L ++RA + F VNVQ SGS +N V ++LKP D IM LDL HGGHL+HG ++ F+ Y ++ TG ID D++E A Sbjct: 6 LQKQDKEIFDAISNEVLRQTETLELIASENFASKAVMEACGSVMTNKYAEGYPGKRYYGGCEFVDVAEDLARERAKKLFGCQ----YVNVQPHSGSSANMGVLFSVLKPGDTIMGLDLSHGGHLTHG-----SSVNFSGQLFDAHSYGVDRETGLIDMDRVEDMA 161 HSP 2 Score: 28.8758 bits (63), Expect = 4.192e-35 Identity = 10/25 (40.00%), Postives = 20/25 (80.00%), Query Frame = 1 Query: 736 KLIVAGASAYARLYDYERIRKVCNK 810 +LI+ GASAY++ +D++ R++ +K Sbjct: 167 RLIICGASAYSQGFDFKAFRQIADK 191 The following BLAST results are available for this feature:
BLAST of EY659990 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659990 ID=EY659990; Name=EY659990; organism=Citrus sinensis; type=EST; length=932bpback to top |