EY659990
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_CHLL2 (Serine hydroxymethyltransferase OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=glyA PE=3 SV=2) HSP 1 Score: 139.813 bits (351), Expect = 4.192e-35 Identity = 78/165 (47.27%), Postives = 105/165 (63.64%), Query Frame = 2 Query: 227 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 721 L + D E+ + I E RQ + LELI SENFTS +VMQA GS+MTN ++EGYPG RYYGG E++D+AE+L + RA + F VNVQ SGS +N V ++LKP DRIM LDL HGGHL+HG ++ F+ Y ++ TG ID +++E+ A Sbjct: 6 LRMQDKEVFEAIAGETLRQTETLELIASENFTSRAVMQACGSLMTNKYAEGYPGKRYYGGCEFVDIAENLARDRAKKLFGCQ----YVNVQPHSGSSANMAVLFSVLKPGDRIMGLDLSHGGHLTHG-----SPVNFSGQLFDAHSYGVDRETGCIDMNRVEELA 161 HSP 2 Score: 30.0314 bits (66), Expect = 4.192e-35 Identity = 11/25 (44.00%), Postives = 20/25 (80.00%), Query Frame = 1 Query: 736 KLIVAGASAYARLYDYERIRKVCNK 810 KLI+ GASAY++ +D++ R++ +K Sbjct: 167 KLIICGASAYSQGFDFKAFREIADK 191
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_SOLUE (Serine hydroxymethyltransferase OS=Solibacter usitatus (strain Ellin6076) GN=glyA PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 4.559e-35 Identity = 94/246 (38.21%), Postives = 134/246 (54.47%), Query Frame = 2 Query: 197 VTWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFATNK-SYNVGRMAHLXWVGCCWCHPFTFENADGVTTTLTNTSWG 931 +T ++++ L VDPEI I+HE ARQ LELI SENFTS +V++A GSV TN ++EGYPG RYYGG EY D+ E+L ++RA + F + VNVQ SGS +N Y A++ P D +M L+L HGGHL+HG+ + + ++ +PY + + IDYD++EK A + F + A + + MAH+ + HP E AD VT+T T G Sbjct: 1 MTESQRMSRTLAEVDPEIYQAIQHETARQDGQLELIASENFTSEAVLEATGSVFTNKYAEGYPGKRYYGGCEYTDVVENLARERASKLFGAEY----VNVQPHSGSQANQAAYGAVVSPGDTVMGLNLAHGGHLTHGHALNFSGKT-----YKIVPYNVRKEDELIDYDEVEKLAREHQPKMIIAGASAYPRIIDFARFRKIADAVGAVFLVDMAHISGLVAAGVHPNPCEFADIVTSTTHKTLRG 237
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_GEOMG (Serine hydroxymethyltransferase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=glyA PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 4.559e-35 Identity = 91/236 (38.56%), Postives = 125/236 (52.97%), Query Frame = 2 Query: 227 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFATNKSYNV-GRMAHLXWVGCCWCHPFTFENADGVTTTLTNTSWG 931 LE DP +A+ I HE RQ LELI SENF S +VM+A GSV+TN ++EGYPG RYYGG ++D+ E+L +RA E F D NVQ SGS +N VY ++LKP D I+ ++L HGGHL+HG ++ FF +PY +++ T ID++++E+ A + F A V MAH+ + HP A+ VTTT T G Sbjct: 4 LETFDPAVAEAIRHETERQEYNLELIASENFVSEAVMEAQGSVLTNKYAEGYPGKRYYGGCHHVDVVENLAIERAKELFGAD----HANVQPHSGSQANMAVYFSVLKPGDTILGMNLSHGGHLTHG-----SPVNFSGRFFNVVPYGVSQETETIDFNEVERLALEHKPKLIVVGASAYPRVLDFAAFRAIADKVGALVMVDMAHIAGLVAAGLHPSPVPYAEFVTTTTHKTLRG 230
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_DESDA (Serine hydroxymethyltransferase OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=glyA PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 7.119e-35 Identity = 77/161 (47.83%), Postives = 97/161 (60.25%), Query Frame = 2 Query: 239 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 721 DPEIA I E RQ LELI SEN S +V +A GSV+TN ++EGYPG RYYGG EY+DM E+L Q+RA F + VNVQ SGS +N Y A+LKP D I+ +DL HGGHL+HG ++ F+ + Y + TG IDYD + A Sbjct: 8 DPEIAKAIALESQRQMGKLELIASENIVSTAVREAQGSVLTNKYAEGYPGKRYYGGCEYVDMVETLAQERAKLLF----DAQYVNVQPHSGSQANMAAYLAVLKPGDTILGMDLSHGGHLTHG-----SPVNFSGRLFKIISYGVQRETGRIDYDDVAAKA 159 HSP 2 Score: 29.261 bits (64), Expect = 7.119e-35 Identity = 14/35 (40.00%), Postives = 19/35 (54.29%), Query Frame = 1 Query: 706 VGEKCHPLXXKLIVAGASAYARLYDYERIRKVCNK 810 V K +IVAGASAY R D+ R R + ++ Sbjct: 155 VAAKAREHKPSVIVAGASAYPRAIDFARFRAIADE 189
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_GEOSM (Serine hydroxymethyltransferase OS=Geobacter sp. (strain M21) GN=glyA PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 7.776e-35 Identity = 91/236 (38.56%), Postives = 123/236 (52.12%), Query Frame = 2 Query: 227 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFATNKSYNV-GRMAHLXWVGCCWCHPFTFENADGVTTTLTNTSWG 931 LE DP +A++I HE RQ LELI SENF S +V++A GSV+TN ++EGYPG RYYGG +D+ E+L RA E F D VNVQ SGS +N VY ++LKP D ++ ++L HGGHL+HG ++ F +PY +++ T IDY++ E+ A F R A V MAH+ + HP A+ VTTT T G Sbjct: 4 LETFDPAVAEVIRHETERQEYNLELIASENFVSPAVLEAQGSVLTNKYAEGYPGKRYYGGCHCVDVVENLAIDRAKELFGAD----HVNVQPHSGSQANMAVYFSVLKPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLFNIVPYGVSKETQTIDYEETERLALEHKPKMIVVGASAYPRIIDFEAFRRIADKVGAVVMVDMAHIAGLVAAGLHPSPVPYAEFVTTTTHKTLRG 230
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_NITSB (Serine hydroxymethyltransferase OS=Nitratiruptor sp. (strain SB155-2) GN=glyA PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 1.016e-34 Identity = 93/232 (40.09%), Postives = 125/232 (53.88%), Query Frame = 2 Query: 239 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFATN-KSYNVGRMAHLXWVGCCWCHPFTFENADGVTTTLTNTSWG 931 DP + +I E E RQ LE+I SENFTS +VM+A+GSV TN ++EGYPG RYYGG EY D E L +RA E F + VNVQ SGS +N VY ALLKP+D+I+ +DL HGGHL+HG K++A +++ Y +N+ G+IDYD++ A + F A + + +AH+ + HP F D VTTT T G Sbjct: 8 DPAVYEIFEKELQRQTDHLEMIASENFTSPAVMEAMGSVFTNKYAEGYPGKRYYGGCEYADAIEELAIQRAKELFGCE----FVNVQPHSGSQANQGVYLALLKPYDKILGMDLSHGGHLTHG-----AKVNASGKIYQSFFYGVNDE-GWIDYDRVLDIAKIVKPKLIVCGASAYPRVIDFKKFREIADEVGALLMADIAHIAGLVAAGEHPSPFPYCDVVTTTTHKTLRG 229
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_AYWBP (Serine hydroxymethyltransferase OS=Aster yellows witches'-broom phytoplasma (strain AYWB) GN=glyA PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 1.016e-34 Identity = 91/233 (39.06%), Postives = 125/233 (53.65%), Query Frame = 2 Query: 239 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFATN-KSYNVGRMAHLXWVGCCWCHPFTFE-NADGVTTTLTNTSWG 931 D EI D+IE EKARQ + + LI SENF S +V+ A GS++TN ++EGYP ARYY G + +D E + +RA + F NVQ SGS +N V+ ALLKP D+I+ L L GGHL+HG+ K+S F+E Y +N T +DYD++ K A F + A +Y + +AH+ + C HP FE NAD VT+T+ T G Sbjct: 24 DQEIFDLIEQEKARQKENILLIASENFVSQAVLDAQGSILTNKYAEGYPQARYYNGCKNVDQIEKIAIQRATKLFGAK----YANVQPHSGSQANMGVFQALLKPGDKILGLSLMDGGHLTHGH-----KLSFSGGFYEAHFYNVNPQTEMLDYDEIRKVALAVKPKLIIAGYSAYSKTINFKKFRQIADEVNAYLIADIAHIAGLVACGLHPCPFEANADVVTSTMHKTLRG 247
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_SALRD (Serine hydroxymethyltransferase OS=Salinibacter ruber (strain DSM 13855) GN=glyA PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.572e-34 Identity = 75/161 (46.58%), Postives = 100/161 (62.11%), Query Frame = 2 Query: 239 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 721 DPEI D+I+ E RQ GLELI SENF S +VM+A+G+ +TN ++EG PG RYYGG E +D AE L ++RA E + D W VNVQ +G+ +N VY LL P D + LDL HGGHL+HG ++ I +E Y + E TG ID +++ A Sbjct: 8 DPEIHDVIQKEVQRQNDGLELIASENFASRAVMEAMGTALTNKYAEGLPGKRYYGGCEVVDRAEELARERAKELYDCD---W-VNVQPHAGAQANSAVYLTLLDPGDTFLGLDLSHGGHLTHG-----SPVNFSGILYEAEYYGVEEETGRIDMNRVRDRA 159 HSP 2 Score: 31.187 bits (69), Expect = 1.572e-34 Identity = 14/43 (32.56%), Postives = 24/43 (55.81%), Query Frame = 1 Query: 706 VGEKCHPLXXKLIVAGASAYARLYDYERIRKVCNKQKL*CWQN 834 V ++ + K+I GASAY R +DYE R++ ++ W + Sbjct: 155 VRDRAKEVQPKMISIGASAYPRDFDYEAFREIADEVGAFLWMD 197
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA2_COLP3 (Serine hydroxymethyltransferase 2 OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=glyA2 PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 1.573e-34 Identity = 75/161 (46.58%), Postives = 99/161 (61.49%), Query Frame = 2 Query: 239 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 721 D I +E E RQ +ELI SEN+TS VMQA GS +TN ++EGYPG RYYGG E++D+ E L RA E F D NVQ SGS +N V+ ALLKP + ++ + L HGGHL+HG K+S + + Y LNE+TG IDY+++E+ A Sbjct: 12 DDSIWQAMEQEDKRQQDHVELIASENYTSARVMQAQGSQLTNKYAEGYPGKRYYGGCEHVDVIEQLAIDRAKELFGAD----YANVQPHSGSQANAAVFMALLKPGETVLGMSLAHGGHLTHG-----SKVSFSGKIYNAVQYGLNEATGEIDYEEVERLA 163 HSP 2 Score: 30.0314 bits (66), Expect = 1.573e-34 Identity = 11/24 (45.83%), Postives = 19/24 (79.17%), Query Frame = 1 Query: 736 KLIVAGASAYARLYDYERIRKVCN 807 K+I+AG SAY+R+ D++R R + + Sbjct: 169 KMIIAGFSAYSRVVDWQRFRDIAD 192
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_HALHL (Serine hydroxymethyltransferase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=glyA PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.732e-34 Identity = 91/232 (39.22%), Postives = 126/232 (54.31%), Query Frame = 2 Query: 239 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFATN-KSYNVGRMAHLXWVGCCWCHPFTFENADGVTTTLTNTSWG 931 DPE+A IE E+ RQ +ELI SEN+ S VM+A GSV+TN ++EGYPG RYYGG E++D+AE L RA + F D NVQ SGS +N V+ ALLKP D I+ + L HGGHL+HG K++ F + Y +N+ G IDYD++++ AT + + A + +Y V MAH+ + +P +AD VT+T T G Sbjct: 12 DPELAAAIEDERQRQEDHIELIASENYASPRVMEAQGSVLTNKYAEGYPGKRYYGGCEHVDVAEQLAIDRAKQLFGAD----YANVQPHSGSQANAAVFHALLKPGDTILGMSLDHGGHLTHG-----AKVNFSGKLFNAVQYGINDD-GQIDYDEIQRLATEHQPKMVIGGFSAYSQVVDWARLRQIADSVGAYLVVDMAHIAGLVAAGVYPSPIPHADAVTSTTHKTLRG 233 The following BLAST results are available for this feature:
BLAST of EY659990 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659990 ID=EY659990; Name=EY659990; organism=Citrus sinensis; type=EST; length=932bpback to top |