EY659990
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_FLAJ1 (Serine hydroxymethyltransferase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=glyA PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.048e-34 Identity = 74/162 (45.68%), Postives = 99/162 (61.11%), Query Frame = 2 Query: 239 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAT 724 D +I D+I+ EK RQ GLELI SENF S VM+A GSV+TN ++EGYPG RYYGG E +D+ E + RA E F + NVQ SGS +N VY A L P D I+ DL HGGHL+HG ++ + + Y ++ TG +DYD++++ AT Sbjct: 4 DEQIFDLIQEEKDRQIHGLELIASENFVSDEVMEAAGSVLTNKYAEGYPGKRYYGGCEVVDVIEQIAIDRAKELFGAE----YANVQPHSGSQANTAVYHACLNPGDTILGFDLSHGGHLTHG-----SPVNFSGRLYRPVFYGVDAETGRLDYDKIQEIAT 156 HSP 2 Score: 31.187 bits (69), Expect = 2.048e-34 Identity = 13/24 (54.17%), Postives = 19/24 (79.17%), Query Frame = 1 Query: 736 KLIVAGASAYARLYDYERIRKVCN 807 KLI+AGASAY+R D+ R R++ + Sbjct: 161 KLIIAGASAYSRDMDFARFRQIAD 184
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_DESHY (Serine hydroxymethyltransferase OS=Desulfitobacterium hafniense (strain Y51) GN=glyA PE=3 SV=2) HSP 1 Score: 134.806 bits (338), Expect = 2.049e-34 Identity = 69/161 (42.86%), Postives = 103/161 (63.98%), Query Frame = 2 Query: 239 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 721 DPE+A+ I E+ RQ +ELI SENF S +VM A GSV+TN ++EGYPG RYYGG EY+D+ E L ++R + F + NVQ SG+ +N VY A+LKP D ++ ++L HGGHL+HG ++ +++ + Y ++++T IDYD + + A Sbjct: 12 DPEVAEAIAQEEQRQRYKIELIASENFVSRAVMAAQGSVLTNKYAEGYPGKRYYGGCEYVDIVEDLARERVKKLFGAE----HANVQPHSGAQANTAVYFAMLKPGDTVLGMNLSHGGHLTHG-----SPVNISGMYYNFVAYGVDQATERIDYDVVRQLA 163 HSP 2 Score: 32.7278 bits (73), Expect = 2.049e-34 Identity = 14/25 (56.00%), Postives = 20/25 (80.00%), Query Frame = 1 Query: 736 KLIVAGASAYARLYDYERIRKVCNK 810 KLIVAGASAY R D+ R+R++ ++ Sbjct: 169 KLIVAGASAYPRQIDFARLREIADE 193
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_ERWT9 (Serine hydroxymethyltransferase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=glyA PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 2.668e-34 Identity = 76/161 (47.20%), Postives = 104/161 (64.60%), Query Frame = 2 Query: 239 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 721 D ++ +E EK RQ + +ELI SEN+TS VMQA GS +TN ++EGYPG RYYGG E++D+ E L +RA E F D NVQ SGS +NF VYTALL+P D I+ ++L HGGHL+HG ++ + +PY ++E TG IDY++L + A Sbjct: 12 DADLWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEHVDIVEQLAIERAKELFGAD----YANVQPHSGSQANFAVYTALLQPGDTILGMNLAHGGHLTHG-----SPVNLSGKLYNVIPYGIDE-TGKIDYNELAELA 162 HSP 2 Score: 27.335 bits (59), Expect = 2.668e-34 Identity = 10/24 (41.67%), Postives = 19/24 (79.17%), Query Frame = 1 Query: 736 KLIVAGASAYARLYDYERIRKVCN 807 K+IV G SAY+ + D+E++R++ + Sbjct: 168 KMIVGGFSAYSGICDWEKMREIAD 191
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_STRAW (Serine hydroxymethyltransferase OS=Streptomyces avermitilis GN=glyA PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.955e-34 Identity = 91/240 (37.92%), Postives = 125/240 (52.08%), Query Frame = 2 Query: 215 LNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFATN-KSYNVGRMAHLXWVGCCWCHPFTFENADGVTTTLTNTSWG 931 LN PL +DP++A ++ E RQ LE+I SENF V+VM+A GSV+TN ++EGYPG RYYGG E++D+ E + R E F + NVQ SG+ +N ALLKP D IM L+L HGGHL+HG KI+ + + Y ++E+TG +D ++EK A + F R A +Y + MAH + HP +A VTTT T G Sbjct: 4 LNTPLHELDPDVAAAVDAELNRQQSTLEMIASENFAPVAVMEAQGSVLTNKYAEGYPGRRYYGGCEHVDVVEQIAIDRVKELFGAE----HANVQPHSGAQANAAAMFALLKPGDTIMGLNLAHGGHLTHG-----MKINFSGKLYNVVAYHVDETTGQVDMAEVEKLAKESRPKLIVAGWSAYPRQLDFAAFRRIADEVGAYLMVDMAHFAGLVAAGLHPNPVPHAHVVTTTTHKTLGG 234
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_NITMU (Serine hydroxymethyltransferase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=glyA PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 3.476e-34 Identity = 74/165 (44.85%), Postives = 98/165 (59.39%), Query Frame = 2 Query: 227 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 721 LE VDP++ I+ E RQ + +ELI SEN+ S +VMQA GSV+TN ++EGYPG RYYGG EY+D+ E L R F D E VNVQ SGS +N VY LKP D ++ + L HGGHL+HG ++ F + Y L T +DYD++ + A Sbjct: 8 LETVDPDLWQAIKGEMQRQEEYIELIASENYASPAVMQAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRVRALF--DAEY--VNVQPHSGSQANAAVYLTALKPGDTLLGMSLAHGGHLTHG-----ASVNLSGKIFNAVSYGLRSDTEELDYDEVARLA 163 HSP 2 Score: 34.2686 bits (77), Expect = 3.476e-34 Identity = 16/34 (47.06%), Postives = 22/34 (64.71%), Query Frame = 1 Query: 706 VGEKCHPLXXKLIVAGASAYARLYDYERIRKVCN 807 V H KLIVAGASAY+ + D++R RK+ + Sbjct: 159 VARLAHEHKPKLIVAGASAYSLVIDWKRFRKIAD 192
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_DESPS (Serine hydroxymethyltransferase OS=Desulfotalea psychrophila GN=glyA PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.859e-34 Identity = 89/229 (38.86%), Postives = 119/229 (51.97%), Query Frame = 2 Query: 227 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFATN-KSYNVGRMAHLXWVGCCWCHPFTFENADGVTTT 910 L+ DPEI +I+ E+ RQ + LI SEN+ S +V++A GS++TN +SEGYPG RYY G + ID ES+ RA F + VNVQ SGSP+N VY A LKP D I+ + LPHGGHL+HG K+S +F + Y LNE G +DY+++ A + F A + + MAH + HP F AD VTTT Sbjct: 13 LQQQDPEIFSLIQQEEVRQHNKIRLIASENYVSSAVLEATGSILTNKYSEGYPGKRYYEGQQLIDQIESIAIDRAKAVFGAE----HVNVQPYSGSPANMAVYLAFLKPGDTILGMALPHGGHLTHG-----SKVSISGKYFNAVSYALNEE-GILDYEEIRNKALECKPKILIAGHSAYPRILDFAKFREIADEVGALLMVDMAHFAGLVAGGVHPSPFPYADVVTTT 231
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_DESHD (Serine hydroxymethyltransferase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=glyA PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 4.527e-34 Identity = 69/161 (42.86%), Postives = 102/161 (63.35%), Query Frame = 2 Query: 239 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 721 DPE+A+ I E+ RQ +ELI SENF S +VM A GSV+TN ++EGYPG RYYGG EY+D+ E L ++R + F + NVQ SG+ +N VY A+LKP D ++ ++L HGGHL+HG ++ +++ + Y +++ T IDYD + + A Sbjct: 12 DPEVAEAIAQEEQRQRYKIELIASENFVSRAVMAAQGSVLTNKYAEGYPGKRYYGGCEYVDIVEDLARERVKKLFGAE----HANVQPHSGAQANTAVYFAMLKPGDTVLGMNLSHGGHLTHG-----SPVNISGMYYNFVAYGVDQVTERIDYDVVRQLA 163 HSP 2 Score: 32.7278 bits (73), Expect = 4.527e-34 Identity = 14/25 (56.00%), Postives = 20/25 (80.00%), Query Frame = 1 Query: 736 KLIVAGASAYARLYDYERIRKVCNK 810 KLIVAGASAY R D+ R+R++ ++ Sbjct: 169 KLIVAGASAYPRQIDFARLREIADE 193
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_DEHSC (Serine hydroxymethyltransferase OS=Dehalococcoides sp. (strain CBDB1) GN=glyA PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 4.527e-34 Identity = 72/165 (43.64%), Postives = 94/165 (56.97%), Query Frame = 2 Query: 227 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 721 L+ DP + + I E R + ++LI SEN+TS +V++A GSV TN ++EGYPG RYY G EY D E L RA F + NVQ SG+ +N Y A++KP D IM L L HGGHL+HG K++ + + Y LN T IDYD LEK A Sbjct: 4 LKTSDPAVYNAIMQETTRLKETIDLIASENYTSKAVLEAQGSVFTNKYAEGYPGKRYYAGCEYADAVEELAIDRAKTLFHAE----HANVQPHSGAQANMAAYFAMVKPGDTIMGLTLSHGGHLTHG-----SKVNFTGKLYHVIEYGLNAETERIDYDNLEKLA 159 HSP 2 Score: 36.5798 bits (83), Expect = 4.527e-34 Identity = 14/25 (56.00%), Postives = 20/25 (80.00%), Query Frame = 1 Query: 736 KLIVAGASAYARLYDYERIRKVCNK 810 ++IV GASAY R+ D+ER R +C+K Sbjct: 165 RMIVTGASAYPRILDFERFRAICDK 189
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_DEHSB (Serine hydroxymethyltransferase OS=Dehalococcoides sp. (strain BAV1) GN=glyA PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 4.527e-34 Identity = 72/165 (43.64%), Postives = 94/165 (56.97%), Query Frame = 2 Query: 227 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 721 L+ DP + + I E R + ++LI SEN+TS +V++A GSV TN ++EGYPG RYY G EY D E L RA F + NVQ SG+ +N Y A++KP D IM L L HGGHL+HG K++ + + Y LN T IDYD LEK A Sbjct: 4 LKTSDPAVYNAIMQETTRLKETIDLIASENYTSKAVLEAQGSVFTNKYAEGYPGKRYYAGCEYADAVEELAIDRAKTLFHAE----HANVQPHSGAQANMAAYFAMVKPGDTIMGLTLSHGGHLTHG-----SKVNFTGKLYHVIEYGLNAETERIDYDNLEKLA 159 HSP 2 Score: 36.5798 bits (83), Expect = 4.527e-34 Identity = 14/25 (56.00%), Postives = 20/25 (80.00%), Query Frame = 1 Query: 736 KLIVAGASAYARLYDYERIRKVCNK 810 ++IV GASAY R+ D+ER R +C+K Sbjct: 165 RMIVTGASAYPRILDFERFRAICDK 189
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA4_COLP3 (Serine hydroxymethyltransferase 4 OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=glyA4 PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 5.896e-34 Identity = 75/161 (46.58%), Postives = 97/161 (60.25%), Query Frame = 2 Query: 239 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 721 D I +E E RQ +ELI SEN+TS VMQA GS +TN ++EGYPG RYYGG E++D+ E L RA E F D NVQ SGS +N V+ ALLKP + ++ + L HGGHL+HG K+S + + Y LNE TG IDYD++ + A Sbjct: 12 DDSIWQAMEQEDKRQQDHVELIASENYTSARVMQAQGSQLTNKYAEGYPGKRYYGGCEHVDVIEQLAIDRAKELFGAD----YANVQPHSGSQANAAVFMALLKPGETVLGMSLAHGGHLTHG-----SKVSFSGKIYNAVQYGLNEVTGEIDYDEVARLA 163 HSP 2 Score: 30.0314 bits (66), Expect = 5.896e-34 Identity = 11/24 (45.83%), Postives = 19/24 (79.17%), Query Frame = 1 Query: 736 KLIVAGASAYARLYDYERIRKVCN 807 K+I+AG SAY+R+ D++R R + + Sbjct: 169 KMIIAGFSAYSRVVDWQRFRDIAD 192 The following BLAST results are available for this feature:
BLAST of EY659990 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659990 ID=EY659990; Name=EY659990; organism=Citrus sinensis; type=EST; length=932bpback to top |