EY659990
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_GEOBB (Serine hydroxymethyltransferase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=glyA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 6.583e-34 Identity = 90/236 (38.14%), Postives = 122/236 (51.69%), Query Frame = 2 Query: 227 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFATNKSYNV-GRMAHLXWVGCCWCHPFTFENADGVTTTLTNTSWG 931 LE DP +A++I E RQ LELI SENF S +V++A GSV+TN ++EGYPG RYYGG +D+ E+L RA E F D VNVQ SGS +N VY ++LKP D ++ ++L HGGHL+HG ++ F +PY +++ T IDY++ E+ A F R A V MAH+ + HP A+ VTTT T G Sbjct: 4 LETFDPAVAEVIRQETERQEYNLELIASENFVSPAVLEAQGSVLTNKYAEGYPGKRYYGGCHCVDVVENLAIDRAKELFGAD----HVNVQPHSGSQANMAVYFSVLKPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLFNIVPYGVSKETQTIDYEETERLALEHKPKMIVVGASAYPRIIDFEAFRRIADKVGAVVMVDMAHIAGLVAAGLHPSPVPYAEFVTTTTHKTLRG 230
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_ALHEH (Serine hydroxymethyltransferase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=glyA PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 7.678e-34 Identity = 74/161 (45.96%), Postives = 101/161 (62.73%), Query Frame = 2 Query: 239 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 721 DPE+++ +E E+ RQ +ELI SEN+ S V++A GSV+TN ++EGYPG RYYGG E++D AE L +RA + F D NVQ SGS +N VY ALL+P D I+ + L HGGHL+HG K++ F + Y + TG +DY QLE+ A Sbjct: 12 DPELSEAMEAERRRQEDHIELIASENYASPRVLEAQGSVLTNKYAEGYPGKRYYGGCEHVDEAERLAIERAKQLFGAD----YANVQPHSGSQANAAVYLALLQPGDTILGMSLDHGGHLTHG-----AKVNFSGRLFNAVQYGVCPDTGELDYAQLERLA 163 HSP 2 Score: 29.261 bits (64), Expect = 7.678e-34 Identity = 10/24 (41.67%), Postives = 19/24 (79.17%), Query Frame = 1 Query: 736 KLIVAGASAYARLYDYERIRKVCN 807 K+I+ G SAY+R+ D++R+R + + Sbjct: 169 KMIIGGFSAYSRVVDWQRLRDIAD 192
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_ELUMP (Serine hydroxymethyltransferase OS=Elusimicrobium minutum (strain Pei191) GN=glyA PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 7.680e-34 Identity = 70/165 (42.42%), Postives = 102/165 (61.82%), Query Frame = 2 Query: 227 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 721 L+ D + D +E E RQ LELI SENFTS+SVM+A GS++TN ++EGYPG RYYGG E++DM E+L +RA + F + NVQ SG+ +N Y AL+ P D ++ L+L HGGHL+HG+ ++ +F+ +P + + IDY++ K A Sbjct: 5 LQKTDKAVFDAVEKELGRQRTKLELIASENFTSLSVMEAQGSILTNKYAEGYPGKRYYGGCEFVDMVETLAIERAKQIFGAE----HANVQPHSGAQANMAAYLALINPGDTVLGLNLSHGGHLTHGH-----PMNFSGKYFKIVPMNVRKEDEQIDYEEAAKLA 160 HSP 2 Score: 30.8018 bits (68), Expect = 7.680e-34 Identity = 10/24 (41.67%), Postives = 22/24 (91.67%), Query Frame = 1 Query: 736 KLIVAGASAYARLYDYERIRKVCN 807 K+I+AGAS Y+R++D++++R++ + Sbjct: 166 KVIMAGASNYSRIFDWKKLREIAD 189
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_SYNS9 (Serine hydroxymethyltransferase OS=Synechococcus sp. (strain CC9902) GN=glyA PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 8.598e-34 Identity = 91/242 (37.60%), Postives = 127/242 (52.48%), Query Frame = 2 Query: 209 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXXNXXXXXXXXMHDCTIMSVFARFATN-KSYNVGRMAHLXWVGCCWCHPFTFENADGVTTTLTNTSWG 931 + +NA L DPEI+ +I+ E+ RQ LELI SENF S +VMQA GSV+TN ++EG P RYYGG E++D E+L +RA + F W NVQ SG+ +NF V+ ALLKP D IM LDL HGGHL+HG ++ +F + Y ++ +T +D + + K A + F A ++ + MAH+ + HP + D VTTT T G Sbjct: 7 RAINAGLASADPEISRLIDQERHRQETHLELIASENFASQAVMQAQGSVLTNKYAEGLPAKRYYGGCEHVDAIETLAIERAKQLF---DAAW-ANVQPHSGAQANFAVFLALLKPGDTIMGLDLSHGGHLTHG-----SPVNVSGKWFNVVQYGVDPTTQRLDMEAIRKLALEHKPKLIVCGYSAYPRTIDFAAFRSIADEVGAFLLADMAHIAGLVAAGVHPSPVPHCDVVTTTTHKTLRG 239
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_FLAPJ (Serine hydroxymethyltransferase OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=glyA PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 9.999e-34 Identity = 71/162 (43.83%), Postives = 97/162 (59.88%), Query Frame = 2 Query: 239 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAT 724 D +I D+I E+ RQ GLELI SENF S VM+A GSV+TN ++EGYPG RYYGG E +D+ E + RA + F + NVQ SGS +N V+ A LKP D I+ DL HGGHL+HG ++ + Y + TG ++YD++++ AT Sbjct: 4 DQQIFDLIIEEQDRQIHGLELIASENFVSDQVMEAAGSVLTNKYAEGYPGKRYYGGCEVVDVIEQIAIDRAKDLFGAE----YANVQPHSGSQANTAVFAACLKPGDTILGFDLSHGGHLTHG-----SPVNFSGKLYNPTFYGVEPETGMLNYDKIQEIAT 156 HSP 2 Score: 35.039 bits (79), Expect = 9.999e-34 Identity = 15/24 (62.50%), Postives = 20/24 (83.33%), Query Frame = 1 Query: 736 KLIVAGASAYARLYDYERIRKVCN 807 KLI+AGASAY+R D+ER RK+ + Sbjct: 161 KLIIAGASAYSRDMDFERFRKIAD 184
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_PELTS (Serine hydroxymethyltransferase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=glyA PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.000e-33 Identity = 78/165 (47.27%), Postives = 100/165 (60.61%), Query Frame = 2 Query: 215 LNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQL 709 L PL VDPEI IE E RQ LELI SEN S +VM+A GSV+TN ++EGYPG RYYGG E++D+AE L RA E F NVQ SG+ +N VY ALL P D IM +DL HGGHL+HG ++ +F+ Y + + TG I+Y+++ Sbjct: 3 LKRPLSEVDPEIFRAIELETQRQRNTLELIASENVASRAVMEAQGSVLTNKYAEGYPGRRYYGGCEFVDIAEDLAISRAKELFGAG----FANVQPHSGAQANTAVYFALLNPGDTIMGMDLAHGGHLTHG-----SPVNISGRYFKFTFYGVEKETGRINYEKM 158 HSP 2 Score: 28.4906 bits (62), Expect = 1.000e-33 Identity = 11/22 (50.00%), Postives = 18/22 (81.82%), Query Frame = 1 Query: 736 KLIVAGASAYARLYDYERIRKV 801 ++IVAGASAY R D+ +I+++ Sbjct: 168 RMIVAGASAYPRAIDFYKIKEI 189
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_DEHE1 (Serine hydroxymethyltransferase OS=Dehalococcoides ethenogenes (strain 195) GN=glyA PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 1.000e-33 Identity = 72/165 (43.64%), Postives = 93/165 (56.36%), Query Frame = 2 Query: 227 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 721 L+ DP + + I E R + ++LI SEN+TS +V++A GSV TN ++EGYPG RYY G EY D E L RA F + NVQ SG+ +N Y A++KP D IM L L HGGHL+HG K + + + Y LN T IDYD LEK A Sbjct: 4 LKTSDPAVYNAIMQETTRLKETIDLIASENYTSKAVLEAQGSVFTNKYAEGYPGKRYYAGCEYADAIEELAIDRAKTLFHAE----HANVQPHSGAQANMAAYFAMVKPGDTIMGLTLSHGGHLTHG-----SKANFTGKLYHVIEYGLNAETERIDYDNLEKLA 159 HSP 2 Score: 37.3502 bits (85), Expect = 1.000e-33 Identity = 15/25 (60.00%), Postives = 20/25 (80.00%), Query Frame = 1 Query: 736 KLIVAGASAYARLYDYERIRKVCNK 810 +LIV GASAY R+ D+ER R +C+K Sbjct: 165 RLIVTGASAYPRILDFERFRAICDK 189
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_SHISS (Serine hydroxymethyltransferase OS=Shigella sonnei (strain Ss046) GN=glyA PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 1.123e-33 Identity = 78/161 (48.45%), Postives = 103/161 (63.98%), Query Frame = 2 Query: 239 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 721 D E+ +E EK RQ + +ELI SEN+TS VMQA GS +TN ++EGYPG RYYGG EY+D+ E L RA E F D NVQ SGS +NF VYTALL+P D ++ ++L HGGHL+HG ++ + +PY + ++TG+IDY LEK A Sbjct: 12 DAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGAD----YANVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLYNIVPYGI-DATGHIDYADLEKQA 162
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_SHIFL (Serine hydroxymethyltransferase OS=Shigella flexneri GN=glyA PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 1.123e-33 Identity = 78/161 (48.45%), Postives = 103/161 (63.98%), Query Frame = 2 Query: 239 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 721 D E+ +E EK RQ + +ELI SEN+TS VMQA GS +TN ++EGYPG RYYGG EY+D+ E L RA E F D NVQ SGS +NF VYTALL+P D ++ ++L HGGHL+HG ++ + +PY + ++TG+IDY LEK A Sbjct: 12 DAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGAD----YANVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLYNIVPYGI-DATGHIDYADLEKQA 162
BLAST of EY659990 vs. ExPASy Swiss-Prot
Match: GLYA_SHIF8 (Serine hydroxymethyltransferase OS=Shigella flexneri serotype 5b (strain 8401) GN=glyA PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 1.123e-33 Identity = 78/161 (48.45%), Postives = 103/161 (63.98%), Query Frame = 2 Query: 239 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNNHSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 721 D E+ +E EK RQ + +ELI SEN+TS VMQA GS +TN ++EGYPG RYYGG EY+D+ E L RA E F D NVQ SGS +NF VYTALL+P D ++ ++L HGGHL+HG ++ + +PY + ++TG+IDY LEK A Sbjct: 12 DAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGAD----YANVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLYNIVPYGI-DATGHIDYADLEKQA 162 The following BLAST results are available for this feature:
BLAST of EY659990 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659990 ID=EY659990; Name=EY659990; organism=Citrus sinensis; type=EST; length=932bpback to top |