EY659989

Overview
NameEY659989
Unique NameEY659989
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659989 vs. ExPASy Swiss-Prot
Match: GAL10_YEAST (Bifunctional protein GAL10 OS=Saccharomyces cerevisiae GN=GAL10 PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 5.867e-13
Identity = 61/165 (36.97%), Postives = 82/165 (49.70%), Query Frame = 3
Query:  126 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNF-NSYYDPSLKRARQKLLQKHQVFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPSIVWASSSSVYGLNTQ----VPFSESHRTDQPASLYAATKKAGEEI 605
            VLVTG AG++GSH  + L + G   +  DN  NS YD     AR ++L KH +   E DL D   L K+F       V+H A    V  + Q P  Y  +NI G V LLE+ +  N     V++SS++VYG  T+    +P  E      P + Y  TK A E I
Sbjct:   14 VLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSV---ARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVS-KFVFSSSATVYGDATRFPNMIPIPEECPLG-PTNPYGHTKYAIENI 173          
BLAST of EY659989 vs. ExPASy Swiss-Prot
Match: EXOB_AZOBR (UDP-glucose 4-epimerase OS=Azospirillum brasilense GN=exoB PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.662e-13
Identity = 62/203 (30.54%), Postives = 94/203 (46.31%), Query Frame = 3
Query:   93 SATPRSPNGMTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFFTVYG--PWGRPDMA 695
            +A+PR      VLVTG AG++GSH   AL   G   + +D+ ++    ++  A         V +VEGD+  A LL ++        V+H A    V  ++  P  Y  +N A  + LL  C        +V++S+++VYG    VP  E   T  P + Y A+K   E++       +GL    LR+F V G  P GR   A
Sbjct:    6 AASPR------VLVTGGAGYIGSHVLHALTDAGIPAVTIDDLSAGRREAIPAA---------VPLVEGDIGSAELLDRVMRDHRVDAVMHFAGSIVVPESVVKPLDYYRNNTANSLTLLGACLRAGID-KVVFSSTAAVYGAPESVPIREDAPT-VPINPYGASKLMTEQMLRDAGAAHGLRSVILRYFNVAGADPAGRTGQA 191          
BLAST of EY659989 vs. ExPASy Swiss-Prot
Match: ARAE1_ARATH (UDP-arabinose 4-epimerase 1 OS=Arabidopsis thaliana GN=MUR4 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.001e-12
Identity = 58/200 (29.00%), Postives = 99/200 (49.50%), Query Frame = 3
Query:   93 SATPRSPNGMT-VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFFTVYG--PWGR 683
            S   R   G+T VLVTG AG++GSH +L L K    V  +DN +     +++  ++   +  ++  +  DL DA  + K+F    F  V+H AA A V  + Q P  Y  +  +  + +LE   + +   +++++S+ + YG    +P +E      P + Y   KK  E+I   ++    +A+  LR+F V G  P GR
Sbjct:   61 SVFSRHEPGVTHVLVTGGAGYIGSHAALRLLKESYRVTIVDNLSRGNLAAVRILQELFPEPGRLQFIYADLGDAKAVNKIFTENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVLET-MAAHGVKTLIYSSTCATYGEPDIMPITE-ETPQVPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGR 258          
BLAST of EY659989 vs. ExPASy Swiss-Prot
Match: GALE_NEIMA (UDP-glucose 4-epimerase OS=Neisseria meningitidis serogroup A GN=galE PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.307e-12
Identity = 50/160 (31.25%), Postives = 79/160 (49.38%), Query Frame = 3
Query:  126 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEI 605
            +LVTG  GF+GSH  ++L K G  V+ LDN  +     L R   K +   ++   +GD+ D  +L ++F       V+H A    V  ++  P  Y  +N++G + L E         SIV++SS++VYG   +VP++E        S Y  +K   E I
Sbjct:    4 ILVTGGTGFIGSHTVVSLLKSGHQVVILDNLCNSSINILPRL--KTITGQEIPFYQGDIRDREILRRIFAENRIDSVIHFAGLKAVGESVAEPMKYYDNNVSGSLVLAEEMARAGVF-SIVFSSSATVYGDPGKVPYTEDMPLGDTTSPYGTSKSMVERI 160          
BLAST of EY659989 vs. ExPASy Swiss-Prot
Match: GALE_NEIMC (UDP-glucose 4-epimerase OS=Neisseria meningitidis serogroup C GN=galE PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.707e-12
Identity = 49/160 (30.63%), Postives = 79/160 (49.38%), Query Frame = 3
Query:  126 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEI 605
            +LVTG  GF+GSH  ++L K G  V+ LDN  +     L R   K +   ++   +GD+ D  +L ++F       V+H A    V  ++  P  Y  +N++G + L E          IV++SS++VYG   +VP++E  +     S Y  +K   E I
Sbjct:    4 ILVTGGTGFIGSHTVVSLLKSGHQVVILDNLCNSSINILPRL--KTITGQEIPFYQGDIRDREILRRIFAENRIDSVIHFAGLKAVGESVAEPMKYYDNNVSGSLVLAEEMARAGVF-KIVFSSSATVYGDPGKVPYTEDMQPGDTTSPYGTSKSMVERI 160          
BLAST of EY659989 vs. ExPASy Swiss-Prot
Match: ARAE4_ARATH (Putative UDP-arabinose 4-epimerase 4 OS=Arabidopsis thaliana GN=At5g44480 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.912e-12
Identity = 57/200 (28.50%), Postives = 98/200 (49.00%), Query Frame = 3
Query:   93 SATPRSPNGMT-VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFFTVYG--PWGR 683
            SA  +   G+T VLVTG AG++GSH +L L +    V  +DN +     ++K  +Q   Q  ++  +  DL D   + K+F    F  V+H AA A V  +   P  Y  +  +  + +LE   + +    ++++S+ + YG   ++P +E      P + Y   KK  E++   ++    +A+  LR+F V G  P GR
Sbjct:   85 SAFSQREEGVTHVLVTGGAGYIGSHAALRLLRDSYRVTIVDNLSRGNLGAVKTLQQLFPQTGRLQFIYADLGDPLAVEKIFSENAFDAVMHFAAVAYVGESTLYPLKYYHNITSNTLGVLE-AMARHKVKKLIYSSTCATYGEPEKMPITED-TPQVPINPYGKAKKMAEDMILDFSKNSDMAVMILRYFNVIGSDPGGR 282          
BLAST of EY659989 vs. ExPASy Swiss-Prot
Match: RHM2_ARATH (Probable rhamnose biosynthetic enzyme 2 OS=Arabidopsis thaliana GN=RHM2 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.803e-12
Identity = 56/187 (29.95%), Postives = 81/187 (43.32%), Query Frame = 3
Query:  126 VLVTGAAGFVGSHCSLALKKRGDG--VLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPSIVWASSSSVYGLNTQVPFSESHRTDQ--PASLYAATKKAGEEIAHTYNHIYGLALTGLRFFTVYGP 674
            +L+TGAAGF+ SH +  L +      ++ LD  +  Y   LK         +  F V+GD+    L+  L        ++H AAQ  V  +  N   +  +NI G   LLE CK        +  S+  VYG   +     +H   Q  P + Y+ATK   E +   Y   YGL +   R   VYGP
Sbjct:   11 ILITGAAGFIASHVANRLIRNYPDYKIVVLDKLD--YCSDLKNLDPSFSSPNFKF-VKGDIASDDLVNYLLITENIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAAVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGP 194          
BLAST of EY659989 vs. ExPASy Swiss-Prot
Match: RFBB_XANCB (dTDP-glucose 4,6-dehydratase OS=Xanthomonas campestris pv. campestris (strain B100) GN=rfbB PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.803e-12
Identity = 57/198 (28.79%), Postives = 92/198 (46.46%), Query Frame = 3
Query:  123 TVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSV--------NPQPSIVWASSSSVYG-LNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFFTVYGPWGRPD 689
            T LVTG AGF+G +  L    RG  V+ LD     Y  +L            +F V+GD+ D  L+T+L        VL+ AA++ V  +++ P +++ +N+ G + LLE  +                +  S+  VYG L     F+E+     P S Y+A+K A + +   ++H YGL +        YGP+  P+
Sbjct:    3 TWLVTGGAGFIGGNFVLEAVSRGIRVVNLDALT--YAGNLNTLASLEGNADHIF-VKGDIGDGALVTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALPDTRRDAFRFLHVSTDEVYGTLGETGKFTET-TPYAPNSPYSASKAASDHLVRAFHHTYGLPVLTTNCSNNYGPYHFPE 196          
BLAST of EY659989 vs. ExPASy Swiss-Prot
Match: RFBB_XANCP (dTDP-glucose 4,6-dehydratase OS=Xanthomonas campestris pv. campestris GN=rfbB PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.966e-12
Identity = 57/198 (28.79%), Postives = 92/198 (46.46%), Query Frame = 3
Query:  123 TVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSV--------NPQPSIVWASSSSVYG-LNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFFTVYGPWGRPD 689
            T LVTG AGF+G +  L    RG  V+ LD     Y  +L            +F V+GD+ D  L+T+L        VL+ AA++ V  +++ P +++ +N+ G + LLE  +                +  S+  VYG L     F+E+     P S Y+A+K A + +   ++H YGL +        YGP+  P+
Sbjct:    3 TWLVTGRAGFIGGNFVLEAVSRGIRVVNLDALT--YAGNLNTLASLEGNADHIF-VKGDIGDGALVTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALPDTRRDAFRFLHVSTDEVYGTLGETGKFTET-TPYAPNSPYSASKAASDHLVRAFHHTYGLPVLTTNCSNNYGPYHFPE 196          
BLAST of EY659989 vs. ExPASy Swiss-Prot
Match: ARAE3_ARATH (Probable UDP-arabinose 4-epimerase 3 OS=Arabidopsis thaliana GN=At4g20460 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 4.966e-12
Identity = 58/200 (29.00%), Postives = 99/200 (49.50%), Query Frame = 3
Query:   93 SATPRSPNGMT-VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFFTVYG--PWGR 683
            +A  RS  G+T VLVTG AG++GSH +L L K    V  +DN +     ++K  +    +  ++  +  DL DA  + K+F    F  V+H AA A V  +  +P  Y  +  +  + +LE   + +    ++++S+ + YG   ++P  E      P + Y   KK  E++   ++    +A+  LR+F V G  P GR
Sbjct:   60 TAFSRSEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNLGAVKVLQGLFPEPGRLQFIYADLGDAKAVDKIFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLEAV-ARHKVKKLIYSSTCATYGEPDKMPIVEV-TPQVPINPYGKAKKMAEDMILDFSKNSDMAVMILRYFNVIGSDPEGR 257          
The following BLAST results are available for this feature:
BLAST of EY659989 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
GAL10_YEAST5.867e-1336.97Bifunctional protein GAL10 OS=Saccharomyces cerevi... [more]
EXOB_AZOBR7.662e-1330.54UDP-glucose 4-epimerase OS=Azospirillum brasilense... [more]
ARAE1_ARATH1.001e-1229.00UDP-arabinose 4-epimerase 1 OS=Arabidopsis thalian... [more]
GALE_NEIMA1.307e-1231.25UDP-glucose 4-epimerase OS=Neisseria meningitidis ... [more]
GALE_NEIMC1.707e-1230.63UDP-glucose 4-epimerase OS=Neisseria meningitidis ... [more]
ARAE4_ARATH2.912e-1228.50Putative UDP-arabinose 4-epimerase 4 OS=Arabidopsi... [more]
RHM2_ARATH3.803e-1229.95Probable rhamnose biosynthetic enzyme 2 OS=Arabido... [more]
RFBB_XANCB3.803e-1228.79dTDP-glucose 4,6-dehydratase OS=Xanthomonas campes... [more]
RFBB_XANCP4.966e-1228.79dTDP-glucose 4,6-dehydratase OS=Xanthomonas campes... [more]
ARAE3_ARATH4.966e-1229.00Probable UDP-arabinose 4-epimerase 3 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-017-C09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659989 ID=EY659989; Name=EY659989; organism=Citrus sinensis; type=EST; length=878bp
TGCAGGACCGGTCCGGAATTTTTCGGACGGCGACGCGTNCGCTCCTCTTT
TCTTACAATGGCGGGGNAGAGTGGGAGAAGCAGGTCCGCCACTCTGCCAC
CCCTCGCTCACCCAACGGGATGACCGTTTTGGTCACCGGAGCTGCCGGTT
TCGTCGGATCTCACTGCTCCCTCGCTCTCAAAAAGCGAGGCGATGGCGTT
TTGGGGTTGGATAATTTCAACAGCTATTACGATCCGTCGCTTAAACGGGC
GAGGCAAAAGCTGCTTCAAAAGCATCAAGTCTTCATCGTCGAAGGGGACC
TGAATGACGCTCCCCTGTTAACAAAGCTTTTCGACGTTGTACCTTTCACC
CACGTACTGCACTTAGCAGCACAGGCCGGGGTTCGCTACGCCATGCAGAA
TCCGCAATCTTACGTGGCATCCAACATCGCTGGATTCGTCAACCTGCTCG
AAGTTTGCAAATCGGTGAACCCTCAGCCGTCGATCGTGTGGGCCTCATCG
AGCTCGGTGTACGGCCTCAACACCCAGGTCCCCTTCTCCGAGTCGCACAG
AACCGACCAGCCCGCGAGTTTGTACGCGGCGACTAAGAAAGCCGGGGAGG
AAATCGCCCACACTTACAACCATATTTACGGTCTTGCCCTCACGGGCCTA
AGGTTCTTCACCGTGTACGGCCCCTGGGGGAGACCCGACATGGCTTACTT
CTTCTTCACCAAGATATCTTACAGGGCAAACCATTGATGTGTACAAGACG
CAAGATGACAGGGAGGTGGCGCGTGACTCCCATACATANATGACGAANNG
AAGGGCTGTGCTCGGGCGTTGGACACGGGGGGAAAAACACCGGGGAGCCG
GGGGAAAAAACGGGGCCCCCGCTCGCTG
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