EY659986

Overview
NameEY659986
Unique NameEY659986
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length852
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659986 vs. ExPASy Swiss-Prot
Match: ARFG3_HUMAN (ADP-ribosylation factor GTPase-activating protein 3 OS=Homo sapiens GN=ARFGAP3 PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.560e-31
Identity = 69/130 (53.08%), Postives = 88/130 (67.69%), Query Frame = 1
Query:  199 MASDNLTDKNLVFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDS-WSAEQLKMMVYGGNNRAQVFFKQHGWTDGGKIEAKYTSRAAELYKQILAKEVAKNMAEEA 585
            M   +  D   +F++L++   NK+CFDC AKNP+WAS+TYG+FLCIDCS  HRSLGVH+SF+RST LDS WS  QL+ M  GGN  A  FF QHG +      AKY SRAA+LY     +E  K++A +A
Sbjct:    1 MGDPSKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFIRSTELDSNWSWFQLRCMQVGGNASASSFFHQHGCST-NDTNAKYNSRAAQLY-----REKIKSLASQA 124          
BLAST of EY659986 vs. ExPASy Swiss-Prot
Match: ARFG2_XENTR (ADP-ribosylation factor GTPase-activating protein 2 OS=Xenopus tropicalis GN=arfgap2 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.560e-31
Identity = 64/105 (60.95%), Postives = 78/105 (74.29%), Query Frame = 1
Query:  232 VFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDS-WSAEQLKMMVYGGNNRAQVFFKQHGWTDGGKIEAKYTSRAAELYKQ 543
            VF++L+A   NK CFDC AKNP+WAS+ YG+FLCIDCS VHRSLGVH+SF+RST LDS WS  QL+ M  GGN  A  FF QHG T      AKY SR+A++Y++
Sbjct:   13 VFKRLRAAPTNKSCFDCGAKNPSWASIPYGVFLCIDCSGVHRSLGVHLSFIRSTELDSNWSWFQLRCMQVGGNASANAFFHQHGATT-SDTNAKYNSRSAQMYRE 116          
BLAST of EY659986 vs. ExPASy Swiss-Prot
Match: YQP4_CAEEL (Uncharacterized protein F07F6.4 OS=Caenorhabditis elegans GN=F07F6.4 PE=4 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 1.327e-30
Identity = 63/112 (56.25%), Postives = 82/112 (73.21%), Query Frame = 1
Query:  220 DKNLVFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLD-SWSAEQLKMMVYGGNNRAQVFFKQHGWTDGGKIEAKYTSRAAELYKQILA 552
            D     RK++A   NK+CFDC A+NPTW +VTYG+FLCIDCSAVHR+LGVH++FVRSTNLD +W+  QL+ M  GGN  A  FFK HG  +  + + KY SRAA++Y+  L+
Sbjct:   11 DLQTAMRKMRALPPNKLCFDCGARNPTWCTVTYGVFLCIDCSAVHRNLGVHLTFVRSTNLDTNWTWLQLRAMQLGGNGNANQFFKAHG-CNTTEAQQKYKSRAAQMYRDKLS 121          
BLAST of EY659986 vs. ExPASy Swiss-Prot
Match: ARFG3_MOUSE (ADP-ribosylation factor GTPase-activating protein 3 OS=Mus musculus GN=Arfgap3 PE=2 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 1.733e-30
Identity = 64/116 (55.17%), Postives = 82/116 (70.69%), Query Frame = 1
Query:  199 MASDNLTDKNLVFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDS-WSAEQLKMMVYGGNNRAQVFFKQHGWTDGGKIEAKYTSRAAELYKQ 543
            M   +  D   +F++L++   NK+CFDC AKNP+WAS++YG+FLCIDCS  HRSLGVH+SF+RST LDS WS  QL+ M  GGN+ A  FF QHG        AKY SRAA+LY++
Sbjct:    1 MGDPSKQDILAIFKRLRSVPTNKVCFDCGAKNPSWASISYGVFLCIDCSGSHRSLGVHLSFIRSTELDSNWSWFQLRCMQVGGNSNASSFFHQHGCAT-KDTNAKYNSRAAQLYRE 115          
BLAST of EY659986 vs. ExPASy Swiss-Prot
Match: ARFG2_RAT (ADP-ribosylation factor GTPase-activating protein 2 OS=Rattus norvegicus GN=Arfgap2 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.733e-30
Identity = 63/115 (54.78%), Postives = 82/115 (71.30%), Query Frame = 1
Query:  202 ASDNLTDKNLVFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDS-WSAEQLKMMVYGGNNRAQVFFKQHGWTDGGKIEAKYTSRAAELYKQ 543
            A  + ++   +F++L+A   NK CFDC AK+P+WAS+TYG+FLCIDCS VHRSLGVH+SF+RST LDS WS  QL+ M  GGN  A  FF+QHG         KY SRAA++Y++
Sbjct:    3 AGPSKSEIQTLFKRLRAIPTNKACFDCGAKSPSWASITYGVFLCIDCSGVHRSLGVHLSFIRSTELDSNWSWLQLRCMQVGGNANATAFFRQHGCL-ANDANTKYNSRAAQMYRE 116          
BLAST of EY659986 vs. ExPASy Swiss-Prot
Match: ARFG3_RAT (ADP-ribosylation factor GTPase-activating protein 3 OS=Rattus norvegicus GN=Arfgap3 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.860e-30
Identity = 64/116 (55.17%), Postives = 81/116 (69.83%), Query Frame = 1
Query:  199 MASDNLTDKNLVFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDS-WSAEQLKMMVYGGNNRAQVFFKQHGWTDGGKIEAKYTSRAAELYKQ 543
            M   +  D   +F++L++   NK+CFDC AKNP+WAS++YG+FLCIDCS  HRSLGVH+SF+RST LDS WS  QL+ M  GGN  A  FF QHG        AKY SRAA+LY++
Sbjct:    1 MGDPSKQDILAIFKRLRSVPTNKVCFDCGAKNPSWASISYGVFLCIDCSGSHRSLGVHLSFIRSTELDSNWSWFQLRCMQVGGNANASSFFHQHGCAT-KDTNAKYNSRAAQLYRE 115          
BLAST of EY659986 vs. ExPASy Swiss-Prot
Match: AGD6_ARATH (Probable ADP-ribosylation factor GTPase-activating protein AGD6 OS=Arabidopsis thaliana GN=AGD6 PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.051e-27
Identity = 57/101 (56.44%), Postives = 71/101 (70.30%), Query Frame = 1
Query:  238 RKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNNRAQVFFKQHGWTDGGKIEAKYTSRAAELYK 540
            R L+++ ENK+C DC  KNP WASV+YGIF+C++CS  HR LGVHISFVRS  +DSWSA Q+K M  GGN R   FF Q+G      I +KY S AA +Y+
Sbjct:    8 RTLQSQPENKVCVDCAQKNPQWASVSYGIFMCLECSGKHRGLGVHISFVRSVTMDSWSAIQIKKMEAGGNERLNKFFAQYGIAKETDIISKYNSNAASVYR 108          
BLAST of EY659986 vs. ExPASy Swiss-Prot
Match: AGD7_ARATH (ADP-ribosylation factor GTPase-activating protein AGD7 OS=Arabidopsis thaliana GN=AGD7 PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.518e-26
Identity = 54/101 (53.47%), Postives = 71/101 (70.30%), Query Frame = 1
Query:  238 RKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNNRAQVFFKQHGWTDGGKIEAKYTSRAAELYK 540
            R L+++ ENK+C DC+ KNP WAS++YGIF+C++CS  HR LGVHISFVRS  +DSWS  Q+K M  GGN R   F  Q+G +    I +KY S AA +Y+
Sbjct:    8 RTLQSQPENKVCVDCSQKNPQWASISYGIFMCLECSGKHRGLGVHISFVRSVTMDSWSEIQIKKMDAGGNERLNNFLAQYGISKETDIISKYNSNAASVYR 108          
BLAST of EY659986 vs. ExPASy Swiss-Prot
Match: YDBH_SCHPO (Uncharacterized protein C22E12.17c OS=Schizosaccharomyces pombe GN=SPAC22E12.17c PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.382e-26
Identity = 56/108 (51.85%), Postives = 78/108 (72.22%), Query Frame = 1
Query:  244 LKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFV---RSTNLDSWSAEQLKMMVYGGNNRAQVFFKQHGWT---DGGKIEAKYTSRAAELYKQIL 549
            L+++ +NK+CFDC AKNPTW+S T+GI+LC+DCSA HR++GVHISFV   RST LDSW+  QL++M  GGN  A+ +FK+HG     +      KY+S+ A+ Y + L
Sbjct:   15 LRSQRDNKVCFDCGAKNPTWSSTTFGIYLCLDCSAAHRNMGVHISFVRFLRSTVLDSWTYAQLRVMRVGGNENARNYFKRHGGVSLLNSKDCRLKYSSKTAKQYLEKL 122          
BLAST of EY659986 vs. ExPASy Swiss-Prot
Match: GLO3_YEAST (ADP-ribosylation factor GTPase-activating protein GLO3 OS=Saccharomyces cerevisiae GN=GLO3 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.382e-26
Identity = 59/119 (49.58%), Postives = 79/119 (66.39%), Query Frame = 1
Query:  232 VFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNNRAQVFF-----KQHGWTDGGKIEAKYTSRAAELYKQILAKEVAKNM 573
            VF+KL +  EN++CFDC  KNPTW SV +G+ LCI CSAVHR++GVHI+FV+S+ LD W+   L+    GGN++A+ FF     KQ   T     + KYTS  A+ YK  L K+V K+M
Sbjct:   18 VFQKLGSNMENRVCFDCGNKNPTWTSVPFGVMLCIQCSAVHRNMGVHITFVKSSTLDKWTINNLRRFKLGGNHKARDFFLKNNGKQLLNTANVDAKTKYTSPVAKKYKIHLDKKVQKDM 136          
The following BLAST results are available for this feature:
BLAST of EY659986 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
ARFG3_HUMAN4.560e-3153.08ADP-ribosylation factor GTPase-activating protein ... [more]
ARFG2_XENTR4.560e-3160.95ADP-ribosylation factor GTPase-activating protein ... [more]
YQP4_CAEEL1.327e-3056.25Uncharacterized protein F07F6.4 OS=Caenorhabditis ... [more]
ARFG3_MOUSE1.733e-3055.17ADP-ribosylation factor GTPase-activating protein ... [more]
ARFG2_RAT1.733e-3054.78ADP-ribosylation factor GTPase-activating protein ... [more]
ARFG3_RAT3.860e-3055.17ADP-ribosylation factor GTPase-activating protein ... [more]
AGD6_ARATH1.051e-2756.44Probable ADP-ribosylation factor GTPase-activating... [more]
AGD7_ARATH1.518e-2653.47ADP-ribosylation factor GTPase-activating protein ... [more]
YDBH_SCHPO3.382e-2651.85Uncharacterized protein C22E12.17c OS=Schizosaccha... [more]
GLO3_YEAST3.382e-2649.58ADP-ribosylation factor GTPase-activating protein ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-017-C06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659986 ID=EY659986; Name=EY659986; organism=Citrus sinensis; type=EST; length=852bp
TGAGGTACCGGTCCGGAATTTTCATACAGAGGACGNGTNCGGGTTTCTTC
CAAAACAATGAGGAGTGGGGAGGTGTTGTTCCATGACACCTCGTAAGGTT
TATAATCCCATATTCTCGTTCAGGAAAAAATCAAAATCAAAATTTACAAT
CTTGGGGTTTCGTTTTTCGTAATTTTTATTTCATAAAATTCTTTCTCGAT
GGCTTCCGATAATTTGACCGATAAGAACCTTGTTTTCAGAAAACTGAAAG
CAAAATCGGAAAACAAGATGTGTTTTGATTGTAATGCTAAGAACCCGACG
TGGGCCTCGGTGACTTACGGGATCTTTCTCTGCATTGATTGCTCTGCCGT
TCACCGCAGTCTCGGTGTCCACATCAGCTTCGTTAGGTCAACAAATTTAG
ACTCATGGAGTGCTGAGCAGCTGAAAATGATGGTGTATGGAGGAAACAAC
CGTGCACAAGTTTTCTTTAAGCAGCATGGATGGACAGATGGAGGCAAAAT
TGAGGCTAAGTATACCTCAAGAGCTGCTGAATTATACAAGCAGATTCTTG
CAAAAGAAGTTGCTAAAAATATGGCAGAAGAGGCAGGCTTGCCATCATCA
CCGGTTGCCTCGCAGCCGGCACAAGCAGCTAATGCACTTCCAGATGTTAA
GAATCAGGATGCTCCCTAAGAAATTATCANGGAAGGGCAGAAACTCAAGA
CGCTCCTGGNNTCGCAAAAGTTTCTCGTACAGNTCTTACTAGTACCGTCA
AAAAACCACTTGGTGCGAAGAAATCAGGGAAGACTGGGGGGTCTAAGTGC
TCCAAAGCTGACCTCAAGCCCAGTGAAAGCTATATGAGCAGAAGCTGAGG
AA
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