EY659986

Overview
NameEY659986
Unique NameEY659986
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length852
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659986 vs. ExPASy Swiss-Prot
Match: ARFG1_RAT (ADP-ribosylation factor GTPase-activating protein 1 OS=Rattus norvegicus GN=Arfgap1 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.018e-22
Identity = 48/108 (44.44%), Postives = 73/108 (67.59%), Query Frame = 1
Query:  232 VFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNNRAQVFFK-QHGWTDGGKIEAKYTSRAAELYKQILA 552
            V ++++A+ EN +CF+C A NP W SVTYGI++C++CS  HR LGVH+SFVRS  +D W   +L+ M  GGN + + F + Q  +     ++ KY+SRAA L++  +A
Sbjct:    9 VLKEVRAQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVRSVTMDKWKDIELEKMKAGGNAKFREFLEAQDDYEPSWSLQDKYSSRAAALFRDKVA 116          
BLAST of EY659986 vs. ExPASy Swiss-Prot
Match: ARFG1_MOUSE (ADP-ribosylation factor GTPase-activating protein 1 OS=Mus musculus GN=Arfgap1 PE=1 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 1.018e-22
Identity = 48/108 (44.44%), Postives = 73/108 (67.59%), Query Frame = 1
Query:  232 VFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNNRAQVFFK-QHGWTDGGKIEAKYTSRAAELYKQILA 552
            V ++++A+ EN +CF+C A NP W SVTYGI++C++CS  HR LGVH+SFVRS  +D W   +L+ M  GGN + + F + Q  +     ++ KY+SRAA L++  +A
Sbjct:    9 VLKEVRAQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVRSVTMDKWKDIELEKMKAGGNAKFREFLETQDDYEPSWSLQDKYSSRAAALFRDKVA 116          
BLAST of EY659986 vs. ExPASy Swiss-Prot
Match: YC8E_SCHPO (Uncharacterized protein C622.14 OS=Schizosaccharomyces pombe GN=SPCC622.14 PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 5.053e-22
Identity = 51/102 (50.00%), Postives = 64/102 (62.75%), Query Frame = 1
Query:  259 ENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNNRAQVFFKQHG-WTDGGKIEAKYTSRAAELYKQILAKEV 561
            ENK CFDC+A NP WAS   GIF+C+DCS  HR LGV  SFVRS  +D+WS  Q+KMM  GGN+ A+ F      ++  G I  KY +  AE  +Q +  EV
Sbjct:   13 ENKKCFDCDAPNPQWASCNLGIFICLDCSGQHRGLGVEKSFVRSITMDNWSERQVKMMEVGGNSNAKTFLSTDPMFSAAGSIREKYNTDIAEDLRQKIRAEV 114          
BLAST of EY659986 vs. ExPASy Swiss-Prot
Match: ARFG1_HUMAN (ADP-ribosylation factor GTPase-activating protein 1 OS=Homo sapiens GN=ARFGAP1 PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 8.619e-22
Identity = 46/104 (44.23%), Postives = 69/104 (66.35%), Query Frame = 1
Query:  232 VFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNNRAQVFFK-QHGWTDGGKIEAKYTSRAAELYK 540
            V ++++ + EN +CF+C A NP W SVTYGI++C++CS  HR LGVH+SFVRS  +D W   +L+ M  GGN + + F + Q  +     ++ KY SRAA L++
Sbjct:    9 VLKEVRVQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVRSVTMDKWKDIELEKMKAGGNAKFREFLESQEDYDPCWSLQEKYNSRAAALFR 112          
BLAST of EY659986 vs. ExPASy Swiss-Prot
Match: SMAP1_HUMAN (Stromal membrane-associated protein 1 OS=Homo sapiens GN=SMAP1 PE=1 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 6.830e-19
Identity = 40/81 (49.38%), Postives = 57/81 (70.37%), Query Frame = 1
Query:  229 LVFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNNRAQVFFK 471
            L+  KL  + +NK C DC AK P WAS   G+F+CI C+ +HR+LGVHIS V+S NLD W+AEQ++ M   GN +A++ ++
Sbjct:   19 LILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTAEQIQCMQDMGNTKARLLYE 99          
BLAST of EY659986 vs. ExPASy Swiss-Prot
Match: GCS1_YEAST (ADP-ribosylation factor GTPase-activating protein GCS1 OS=Saccharomyces cerevisiae GN=GCS1 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.987e-18
Identity = 44/103 (42.72%), Postives = 60/103 (58.25%), Query Frame = 1
Query:  241 KLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNNRAQVFFKQHGWTDGGKIEAKYTSRAAELYKQIL 549
            +L+    NK C DC A NP WA+  +G F+C++C+ +HR LGVHISFVRS  +D +  E+L  M  GGN     +FK H        + KY +  AE YK+ L
Sbjct:   16 QLQKIGANKKCMDCGAPNPQWATPKFGAFICLECAGIHRGLGVHISFVRSITMDQFKPEELLRMEKGGNEPLTEWFKSHNIDLSLPQKVKYDNPVAEDYKEKL 118          
BLAST of EY659986 vs. ExPASy Swiss-Prot
Match: SMAP1_MOUSE (Stromal membrane-associated protein 1 OS=Mus musculus GN=Smap1 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.595e-18
Identity = 39/81 (48.15%), Postives = 56/81 (69.14%), Query Frame = 1
Query:  229 LVFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNNRAQVFFK 471
            L+  KL  + +NK C DC AK P WAS   G+F+CI C+ +HR+LGVHIS V+S NLD W+ EQ++ M   GN +A++ ++
Sbjct:   19 LILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTPEQIQCMQDMGNTKARLLYE 99          
BLAST of EY659986 vs. ExPASy Swiss-Prot
Match: SMAP2_CHICK (Stromal membrane-associated protein 2 OS=Gallus gallus GN=SMAP2 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.197e-17
Identity = 39/80 (48.75%), Postives = 53/80 (66.25%), Query Frame = 1
Query:  232 VFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNNRAQVFFK 471
            V   L ++ ENK C DC AK P WAS   G+F+CI C+ +HR+LGVHIS V+S NLD W+ EQ++ M   GN +A   ++
Sbjct:   15 VLGSLLSEEENKYCADCQAKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTQEQIQCMQEMGNGKANRLYE 94          
BLAST of EY659986 vs. ExPASy Swiss-Prot
Match: SMAP2_MOUSE (Stromal membrane-associated protein 2 OS=Mus musculus GN=Smap2 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.349e-17
Identity = 37/82 (45.12%), Postives = 53/82 (64.63%), Query Frame = 1
Query:  232 VFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNNRAQVFFKQH 477
            V   L  + +NK C DC +K P WAS   G+F+CI C+ +HR+LGVHIS V+S NLD W+ EQ++ M   GN +A   ++ +
Sbjct:   15 VLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTQEQIQCMQEMGNGKANRLYEAY 96          
BLAST of EY659986 vs. ExPASy Swiss-Prot
Match: SMAP2_HUMAN (Stromal membrane-associated protein 2 OS=Homo sapiens GN=SMAP2 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.349e-17
Identity = 37/82 (45.12%), Postives = 53/82 (64.63%), Query Frame = 1
Query:  232 VFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNNRAQVFFKQH 477
            V   L  + +NK C DC +K P WAS   G+F+CI C+ +HR+LGVHIS V+S NLD W+ EQ++ M   GN +A   ++ +
Sbjct:   15 VLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTQEQIQCMQEMGNGKANRLYEAY 96          
The following BLAST results are available for this feature:
BLAST of EY659986 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
ARFG1_RAT1.018e-2244.44ADP-ribosylation factor GTPase-activating protein ... [more]
ARFG1_MOUSE1.018e-2244.44ADP-ribosylation factor GTPase-activating protein ... [more]
YC8E_SCHPO5.053e-2250.00Uncharacterized protein C622.14 OS=Schizosaccharom... [more]
ARFG1_HUMAN8.619e-2244.23ADP-ribosylation factor GTPase-activating protein ... [more]
SMAP1_HUMAN6.830e-1949.38Stromal membrane-associated protein 1 OS=Homo sapi... [more]
GCS1_YEAST1.987e-1842.72ADP-ribosylation factor GTPase-activating protein ... [more]
SMAP1_MOUSE2.595e-1848.15Stromal membrane-associated protein 1 OS=Mus muscu... [more]
SMAP2_CHICK2.197e-1748.75Stromal membrane-associated protein 2 OS=Gallus ga... [more]
SMAP2_MOUSE8.349e-1745.12Stromal membrane-associated protein 2 OS=Mus muscu... [more]
SMAP2_HUMAN8.349e-1745.12Stromal membrane-associated protein 2 OS=Homo sapi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-017-C06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659986 ID=EY659986; Name=EY659986; organism=Citrus sinensis; type=EST; length=852bp
TGAGGTACCGGTCCGGAATTTTCATACAGAGGACGNGTNCGGGTTTCTTC
CAAAACAATGAGGAGTGGGGAGGTGTTGTTCCATGACACCTCGTAAGGTT
TATAATCCCATATTCTCGTTCAGGAAAAAATCAAAATCAAAATTTACAAT
CTTGGGGTTTCGTTTTTCGTAATTTTTATTTCATAAAATTCTTTCTCGAT
GGCTTCCGATAATTTGACCGATAAGAACCTTGTTTTCAGAAAACTGAAAG
CAAAATCGGAAAACAAGATGTGTTTTGATTGTAATGCTAAGAACCCGACG
TGGGCCTCGGTGACTTACGGGATCTTTCTCTGCATTGATTGCTCTGCCGT
TCACCGCAGTCTCGGTGTCCACATCAGCTTCGTTAGGTCAACAAATTTAG
ACTCATGGAGTGCTGAGCAGCTGAAAATGATGGTGTATGGAGGAAACAAC
CGTGCACAAGTTTTCTTTAAGCAGCATGGATGGACAGATGGAGGCAAAAT
TGAGGCTAAGTATACCTCAAGAGCTGCTGAATTATACAAGCAGATTCTTG
CAAAAGAAGTTGCTAAAAATATGGCAGAAGAGGCAGGCTTGCCATCATCA
CCGGTTGCCTCGCAGCCGGCACAAGCAGCTAATGCACTTCCAGATGTTAA
GAATCAGGATGCTCCCTAAGAAATTATCANGGAAGGGCAGAAACTCAAGA
CGCTCCTGGNNTCGCAAAAGTTTCTCGTACAGNTCTTACTAGTACCGTCA
AAAAACCACTTGGTGCGAAGAAATCAGGGAAGACTGGGGGGTCTAAGTGC
TCCAAAGCTGACCTCAAGCCCAGTGAAAGCTATATGAGCAGAAGCTGAGG
AA
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