EY659986

Overview
NameEY659986
Unique NameEY659986
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length852
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659986 vs. ExPASy Swiss-Prot
Match: ACAP2_RABIT (Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 OS=Oryctolagus cuniculus GN=ACAP2 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.969e-14
Identity = 36/83 (43.37%), Postives = 49/83 (59.04%), Query Frame = 1
Query:  202 ASDNLTDKNLVFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNN 450
            + + L       ++++    N  C DC   +P WAS+  GI LCI+CS +HRSLGVH S VRS  LD+W  E LK+M   GN+
Sbjct:  391 SKEKLLKGESALQRVQCVPGNASCCDCGLADPRWASINLGITLCIECSGIHRSLGVHFSKVRSLTLDTWEPELLKLMCELGND 473          
BLAST of EY659986 vs. ExPASy Swiss-Prot
Match: AGAP1_MOUSE (Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 OS=Mus musculus GN=Agap1 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.878e-14
Identity = 40/111 (36.04%), Postives = 59/111 (53.15%), Query Frame = 1
Query:  229 LVFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNNRAQVFFKQHGWTDG--GKIEAKYTSRAAELYKQILAK 555
            +  + ++    N  C DC+ +NP WAS+  G  +CI+CS +HR+LG H+S VRS +LD W  E +K+M   GN  A        W +G  G+ +    S   E  + I AK
Sbjct:  610 MALQSIRNMRGNSHCVDCDTQNPNWASLNLGALMCIECSGIHRNLGTHLSRVRSLDLDDWPMELIKVMSSIGNELANSV-----WEEGSQGRTKPSLDSTREEKERWIRAK 715          
BLAST of EY659986 vs. ExPASy Swiss-Prot
Match: AGAP1_HUMAN (Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 OS=Homo sapiens GN=AGAP1 PE=1 SV=4)

HSP 1 Score: 78.9518 bits (193), Expect = 3.878e-14
Identity = 38/109 (34.86%), Postives = 59/109 (54.13%), Query Frame = 1
Query:  229 LVFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNNRAQVFFKQHGWTDGGKIEAKYTSRAAELYKQILAK 555
            +  + ++    N  C DC  +NP WAS+  G  +CI+CS +HR+LG H+S VRS +LD W  E +K+M   GN  A   +++   +  G+ +    S   E  + I AK
Sbjct:  610 MALQSIRNMRGNSHCVDCETQNPNWASLNLGALMCIECSGIHRNLGTHLSRVRSLDLDDWPVELIKVMSSIGNELANSVWEE---SSQGRTKPSVDSTREEKERWIRAK 715          
BLAST of EY659986 vs. ExPASy Swiss-Prot
Match: ACAP2_RAT (Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 OS=Rattus norvegicus GN=Acap2 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.878e-14
Identity = 35/63 (55.56%), Postives = 42/63 (66.67%), Query Frame = 1
Query:  262 NKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNN 450
            N  C DC   +P WAS+  GI LCI+CS +HRSLGVH S VRS  LD+W  E LK+M   GN+
Sbjct:  411 NTSCCDCGLADPRWASINLGITLCIECSGIHRSLGVHFSKVRSLTLDTWEPELLKLMCELGND 473          
BLAST of EY659986 vs. ExPASy Swiss-Prot
Match: ACAP2_MOUSE (Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 OS=Mus musculus GN=Acap2 PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 3.878e-14
Identity = 35/63 (55.56%), Postives = 42/63 (66.67%), Query Frame = 1
Query:  262 NKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNN 450
            N  C DC   +P WAS+  GI LCI+CS +HRSLGVH S VRS  LD+W  E LK+M   GN+
Sbjct:  411 NTSCCDCGLADPRWASINLGITLCIECSGIHRSLGVHFSKVRSLTLDTWEPELLKLMCELGND 473          
BLAST of EY659986 vs. ExPASy Swiss-Prot
Match: ACAP2_HUMAN (Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 OS=Homo sapiens GN=ACAP2 PE=1 SV=3)

HSP 1 Score: 78.9518 bits (193), Expect = 3.878e-14
Identity = 35/63 (55.56%), Postives = 42/63 (66.67%), Query Frame = 1
Query:  262 NKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNN 450
            N  C DC   +P WAS+  GI LCI+CS +HRSLGVH S VRS  LD+W  E LK+M   GN+
Sbjct:  411 NASCCDCGLADPRWASINLGITLCIECSGIHRSLGVHFSKVRSLTLDTWEPELLKLMCELGND 473          
BLAST of EY659986 vs. ExPASy Swiss-Prot
Match: AGAP1_XENLA (Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 OS=Xenopus laevis GN=agap1 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.615e-14
Identity = 36/83 (43.37%), Postives = 52/83 (62.65%), Query Frame = 1
Query:  214 LTDKN--LVFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNNRA 456
            LT +N  L  + ++    N  C DC+A++P WAS+  G  +CI+CS +HR+LG H+S VRS +LD W  E +K+M   GN  A
Sbjct:  606 LTSQNEALALQSIRNLPGNSHCVDCDAQSPDWASLNLGALMCIECSGIHRNLGTHLSRVRSLDLDDWPPELIKVMSAIGNELA 688          
BLAST of EY659986 vs. ExPASy Swiss-Prot
Match: SPS18_YEAST (Sporulation protein SPS18 OS=Saccharomyces cerevisiae GN=SPS18 PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 1.128e-13
Identity = 39/123 (31.71%), Postives = 70/123 (56.91%), Query Frame = 1
Query:  205 SDNLTDKNLVFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNNRAQVFFKQHGWTDGG-KIEAKYTSRAAELYKQILAKEVAKN 570
            S ++ ++  + R  KA   N  CF+C + NP + S ++GIF+C++C+ + R +G +I  V+S  +D++  + ++ +   GNNR   F  ++G    G  +  KY +  A+ YK+ LA EV  N
Sbjct:    7 SKDMENRKRLLRAKKAAGNNN-CFECKSVNPQFVSCSFGIFICVNCANLLRGMGTNIFCVKSITMDNFEEKDVRRVEKSGNNRFGSFLSKNGILQNGIPLREKYDNLFAKSYKRRLANEVRSN 128          
BLAST of EY659986 vs. ExPASy Swiss-Prot
Match: AGAP3_MOUSE (Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 OS=Mus musculus GN=Agap3 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.128e-13
Identity = 33/73 (45.21%), Postives = 44/73 (60.27%), Query Frame = 1
Query:  229 LVFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGN 447
            L  + ++    N +C DC A NP WAS+  G  +CI+CS +HR LG H+S VRS +LD W  E L +M   GN
Sbjct:  662 LAVQAVRTVRGNSLCIDCEAPNPDWASLNLGALMCIECSGIHRHLGAHLSRVRSLDLDDWPPELLAVMTAMGN 734          
BLAST of EY659986 vs. ExPASy Swiss-Prot
Match: ACAP1_HUMAN (Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1 OS=Homo sapiens GN=ACAP1 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.128e-13
Identity = 35/72 (48.61%), Postives = 44/72 (61.11%), Query Frame = 1
Query:  232 VFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGN 447
            V  ++++   N  C DC    P WAS+  G+ LCI CS +HRSLGVH S VRS  LDSW  E +K+M   GN
Sbjct:  407 VVAQVQSVDGNAQCCDCREPAPEWASINLGVTLCIQCSGIHRSLGVHFSKVRSLTLDSWEPELVKLMCELGN 478          
The following BLAST results are available for this feature:
BLAST of EY659986 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
ACAP2_RABIT2.969e-1443.37Arf-GAP with coiled-coil, ANK repeat and PH domain... [more]
AGAP1_MOUSE3.878e-1436.04Arf-GAP with GTPase, ANK repeat and PH domain-cont... [more]
AGAP1_HUMAN3.878e-1434.86Arf-GAP with GTPase, ANK repeat and PH domain-cont... [more]
ACAP2_RAT3.878e-1455.56Arf-GAP with coiled-coil, ANK repeat and PH domain... [more]
ACAP2_MOUSE3.878e-1455.56Arf-GAP with coiled-coil, ANK repeat and PH domain... [more]
ACAP2_HUMAN3.878e-1455.56Arf-GAP with coiled-coil, ANK repeat and PH domain... [more]
AGAP1_XENLA6.615e-1443.37Arf-GAP with GTPase, ANK repeat and PH domain-cont... [more]
SPS18_YEAST1.128e-1331.71Sporulation protein SPS18 OS=Saccharomyces cerevis... [more]
AGAP3_MOUSE1.128e-1345.21Arf-GAP with GTPase, ANK repeat and PH domain-cont... [more]
ACAP1_HUMAN1.128e-1348.61Arf-GAP with coiled-coil, ANK repeat and PH domain... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-017-C06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659986 ID=EY659986; Name=EY659986; organism=Citrus sinensis; type=EST; length=852bp
TGAGGTACCGGTCCGGAATTTTCATACAGAGGACGNGTNCGGGTTTCTTC
CAAAACAATGAGGAGTGGGGAGGTGTTGTTCCATGACACCTCGTAAGGTT
TATAATCCCATATTCTCGTTCAGGAAAAAATCAAAATCAAAATTTACAAT
CTTGGGGTTTCGTTTTTCGTAATTTTTATTTCATAAAATTCTTTCTCGAT
GGCTTCCGATAATTTGACCGATAAGAACCTTGTTTTCAGAAAACTGAAAG
CAAAATCGGAAAACAAGATGTGTTTTGATTGTAATGCTAAGAACCCGACG
TGGGCCTCGGTGACTTACGGGATCTTTCTCTGCATTGATTGCTCTGCCGT
TCACCGCAGTCTCGGTGTCCACATCAGCTTCGTTAGGTCAACAAATTTAG
ACTCATGGAGTGCTGAGCAGCTGAAAATGATGGTGTATGGAGGAAACAAC
CGTGCACAAGTTTTCTTTAAGCAGCATGGATGGACAGATGGAGGCAAAAT
TGAGGCTAAGTATACCTCAAGAGCTGCTGAATTATACAAGCAGATTCTTG
CAAAAGAAGTTGCTAAAAATATGGCAGAAGAGGCAGGCTTGCCATCATCA
CCGGTTGCCTCGCAGCCGGCACAAGCAGCTAATGCACTTCCAGATGTTAA
GAATCAGGATGCTCCCTAAGAAATTATCANGGAAGGGCAGAAACTCAAGA
CGCTCCTGGNNTCGCAAAAGTTTCTCGTACAGNTCTTACTAGTACCGTCA
AAAAACCACTTGGTGCGAAGAAATCAGGGAAGACTGGGGGGTCTAAGTGC
TCCAAAGCTGACCTCAAGCCCAGTGAAAGCTATATGAGCAGAAGCTGAGG
AA
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