EY659972

Overview
NameEY659972
Unique NameEY659972
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length867
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659972 vs. ExPASy Swiss-Prot
Match: TCTP_XENLA (Translationally-controlled tumor protein homolog OS=Xenopus laevis GN=tpt1 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.277e-12
Identity = 50/173 (28.90%), Postives = 78/173 (45.09%), Query Frame = 2
Query:   50 MFVSQDLLTGDELLSDSFPYKETENGILWEVEGKWVV--QGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFATYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADAFEGGEC 553
            M + +D +T DE+ SD +   ET +G+  EVEGK +   +GA+D  +    +                 VDIV   +LQE   F K  +  Y+K ++K L   L +   ER   F K  +   K +L    + QF+ GE M+ DG +    Y+E    P  ++  D     +C
Sbjct:    1 MIIYKDCITEDEMFSDIYKIIETPDGMCLEVEGKVIQREEGAIDDALIGGNASAEFQEDDVGGSSLTSGVDIVMNHKLQET-GFTKDSYKNYIKDYVKQLKAHLEKTNPERVNTFMKGAQETVKKILGNFKNYQFYTGERMNPDGMVGLLDYREDGITPFMIFFKDGLIIEKC 172          
BLAST of EY659972 vs. ExPASy Swiss-Prot
Match: FKSG2_HUMAN (Putative apoptosis inhibitor FKSG2 OS=Homo sapiens GN=FKSG2 PE=5 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.179e-12
Identity = 53/175 (30.29%), Postives = 84/175 (48.00%), Query Frame = 2
Query:   50 MFVSQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVD---IGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFATYMKRFIKLLTPKLSEERQEIFKKNIEG---ATKFLLSKLSDLQFFVGESMHDDGCL-VFAYYKEGATDPTFLYIADAFEGGEC 553
            M + QDL++ +E+ SD +   E  NG+  EVE K + +   + D   IG N S                 VDIV    LQE   F K+ +  Y+K ++K +  KL E+R E  K  I G     K + +   + QFF+GE+++  G + +  Y K+G  DP + ++ +  E   C
Sbjct:    1 MIIFQDLISHNEMFSDIYKIWEITNGLCLEVEQKMLSKTTGNTDDSLIGRNSSSESTEDEVTESTIITS-VDIVTNHHLQES-IFTKEAYKKYIKDYMKSINEKLEEQRPERVKLFITGNEEQIKHIFANFQNYQFFIGENLNPPGMVALLNYRKDGQYDPIYDFLRNGLEIKRC 173          
BLAST of EY659972 vs. ExPASy Swiss-Prot
Match: TCTP_SCHJA (Translationally-controlled tumor protein homolog OS=Schistosoma japonicum GN=TCTP PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.716e-12
Identity = 48/166 (28.92%), Postives = 83/166 (50.00%), Query Frame = 2
Query:   50 MFVSQDLLTGDELLSDSFPYKETENGILWEVEGKWV-VQGAVDVD-IGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFATYMKRFIKLLTPKLSEERQE---IFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIAD 532
            M V +D ++GDE+ SDS    +  N +++EV+  ++ V   +D   I ANPS               +V+D+V   RL    +FDKK +  Y+K ++K +  +L +E  E   IF+  I      +     D + ++GESM+ DG +    ++E    P F+++ D
Sbjct:    1 MRVFKDAISGDEMFSDSHS-PQLINDVVYEVDANFITVSNGLDSKLIAANPSGEEGQEEVSDSTE--RVIDLVHASRLVST-SFDKKSYRAYLKGYLKAIKERLQKENPERVSIFESRINEYMVNVFKNFDDYEHYIGESMNPDGMVALMNFRENGVTPYFVFLKD 162          
BLAST of EY659972 vs. ExPASy Swiss-Prot
Match: TCTP_WUCBA (Translationally-controlled tumor protein homolog OS=Wuchereria bancrofti PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.339e-12
Identity = 51/145 (35.17%), Postives = 72/145 (49.66%), Query Frame = 2
Query:   50 MFVSQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAF-DKKQFATYMKRFIKLLTPKL-----SEERQEIFKKNIEGATKFLLSK--LSDLQFFVGESM 457
            M + +D  T DEL SDSFP K  + G++WE +G+ VV+   ++ + GANPS               + +D V   RLQE   + D   F +Y K F+K +   +     SE     FK+ I+     LLSK     LQFF+GE M
Sbjct:    1 MLIFKDAFTDDELASDSFPMKLVD-GLIWEFKGRQVVRREGEIQLAGANPSTEGEDGDEGSEECVERGIDFVLNHRLQEMNCYEDLATFKSYCKSFMKKVVELMQKNGKSEAEISEFKRKIQAWVVSLLSKDRFKQLQFFIGERM 144          
BLAST of EY659972 vs. ExPASy Swiss-Prot
Match: TCTP_BRUMA (Translationally-controlled tumor protein homolog OS=Brugia malayi PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.844e-11
Identity = 51/145 (35.17%), Postives = 71/145 (48.97%), Query Frame = 2
Query:   50 MFVSQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAF-DKKQFATYMKRFIKLLTPKL-----SEERQEIFKKNIEGATKFLLSK--LSDLQFFVGESM 457
            M + +D  T DEL SDSFP K  + G++WE +G+ VV+   ++ + GANPS               + +D V   RLQE   + D   F +Y K F+K +   +     SE     FK+ I      LLSK     LQFF+GE M
Sbjct:    1 MLIFKDAFTDDELASDSFPMKLVD-GLIWEFKGRQVVRREGEIQLAGANPSAEGEDGDEGSEECVERGIDFVLNHRLQEMNCYEDLVTFKSYCKSFMKKVVELMQKNGKSEAEISEFKRKIPAWVVSLLSKDRFKQLQFFIGERM 144          
BLAST of EY659972 vs. ExPASy Swiss-Prot
Match: TCTP_CAEEL (Translationally-controlled tumor protein homolog OS=Caenorhabditis elegans GN=tct-1 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.366e-11
Identity = 52/182 (28.57%), Postives = 91/182 (50.00%), Query Frame = 2
Query:   50 MFVSQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAF-DKKQFATYMKRFIKLLTPKLSEERQ-----EIFKKNIEGATKFLLSK--LSDLQFFVGESM---HDDGCLVFAYYK--EGATDPTFLYIADAFEGGEC 553
            M + +D+ T DEL SDSFP K  ++ +++E +GK VV+   ++ + G+NPS               + +DIV   +L E   + D   F  Y+K+F+K +   + +  +     + FKK I+G    LL+K    +L FF+GE      ++G +    Y+  +G   PT + + +A    +C
Sbjct:    1 MLIYKDIFTDDELSSDSFPMKLVDD-LVYEFKGKHVVRKEGEIVLAGSNPSAEEGAEDDGSDEHVERGIDIVLNHKLVEMNCYEDASMFKAYIKKFMKNVIDHMEKNNRDKADVDAFKKKIQGWVVSLLAKDRFKNLAFFIGERAAEGAENGQVAIIEYRDVDGTEVPTLMLVKEAIIEEKC 181          
The following BLAST results are available for this feature:
BLAST of EY659972 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
TCTP_XENLA1.277e-1228.90Translationally-controlled tumor protein homolog O... [more]
FKSG2_HUMAN2.179e-1230.29Putative apoptosis inhibitor FKSG2 OS=Homo sapiens... [more]
TCTP_SCHJA3.716e-1228.92Translationally-controlled tumor protein homolog O... [more]
TCTP_WUCBA6.339e-1235.17Translationally-controlled tumor protein homolog O... [more]
TCTP_BRUMA1.844e-1135.17Translationally-controlled tumor protein homolog O... [more]
TCTP_CAEEL5.366e-1128.57Translationally-controlled tumor protein homolog O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-017-B03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659972 ID=EY659972; Name=EY659972; organism=Citrus sinensis; type=EST; length=867bp
TCATACATAGGTATTTTTCTTTTTTGTGTTCGCGAGAGAGACTGCAATCA
TGTTTGTCTCTCAAGATCTCCTCACCGGTGATGAGCTTCTCTCCGACTCT
TTTCCCTACAAGGAAACTGAGAATGGGATTCTGTGGGAAGTTGAGGGAAA
GTGGGTTGTACAAGGAGCCGTTGATGTTGACATTGGTGCAAATCCTTCTG
CCGAAGGAGCTGATGAGGATGAGGGTGTTGATGACCAAGCCGTGAAGGTG
GTCGACATTGTCGACACATTCAGGCTGCAGGAGCAACCTGCTTTTGACAA
GAAGCAGTTTGCAACATACATGAAGAGATTCATCAAGTTGCTGACGCCCA
AGCTGAGTGAGGAGAGGCAGGAGATATTTAAGAAGAATATTGAGGGAGCG
ACCAAGTTCTTGCTCTCGAAGCTCAGTGACCTTCAATTCTTTGTTGGGGA
GAGCATGCATGATGATGGCTGTCTTGTCTTTGCTTACTACAAGGAAGGTG
CGACCGACCCAACATTTTTGTATATTGCTGATGCATTTGAAGGAGGTGAG
TGCTAAGCCGGGCTTCCAAGAGGGAGTGCCTGCTGTTAGTCTAGTTTTTA
TTATTGGCCGCGGGTATTTTTATGGATCTTTTGGACTGGTTTACTCGGGA
CTGGTGCTTGCTGTTTTTTATTTTTATTTTGCCTTAACAATATGGTTTTC
CGCCTCCTATTTTGGGGTTTTTGGGTTGGGGTTGATTTCCCNATTCCTTT
GCNCTTNCTCCTTAAATAAAAAAAAAAAAGGGGGGCCCCTCTTAAGGCCC
AGCCTTTCTCCGCGGGCTGGGCCCCTAGCCCTTTATTGGGCCCCCTATTC
CTTCCCGGCCGGGGTTT
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