EY659969

Overview
NameEY659969
Unique NameEY659969
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY659969 vs. ExPASy Swiss-Prot
Match: TYDC1_ARATH (Tyrosine decarboxylase 1 OS=Arabidopsis thaliana GN=ELI5 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.229e-13
Identity = 67/194 (34.54%), Postives = 96/194 (49.48%), Query Frame = 1 
Query:  151 MNWIDD*YKEIERNIVESKVEDGDVMDGLDEIVKYWLEGLDDIVKDVSECILXGD*LWKKMNVFGYXXGNVRSVGLGGEMLCIGFEEDGCEWV-KVVGSK*ILINCDGLDGEKE*GL-VLFLFCGIGGGVL*GSTCESLVWTLAAARDKVLEKLGGGCDNITKLIVYALDQIYVAL*KCAKLIGMAAANFRRLS 726
            +++I D YK IE   V S+V+ G +   L +      E LD ++ DV   IL G   W+  + F Y   N    G  GEML  G    G  WV     ++  +I  D +   K   L   F+  G GGGV+ GS  E+++  L AARDKVL  +G     + KL+VY+ DQ + AL K  ++ G+   N R L+
Sbjct:   25 VDFIADYYKTIEDFPVLSQVQPGYLHKLLPDSAPDHPETLDQVLDDVRAKILPGVTHWQSPSFFAYYPSNSSVAGFLGEMLSAGLGIVGFSWVTSPAATELEMIVLDWV--AKLLNLPEQFMSKGNGGGVIQGSASEAVLVVLIAARDKVLRSVGKNA--LEKLVVYSSDQTHSALQKACQIAGIHPENCRVLT 214
The following BLAST results are available for this feature:
BLAST of EY659969 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
TYDC1_ARATH1.229e-1334.54Tyrosine decarboxylase 1 OS=Arabidopsis thaliana G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-017-A12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659969 ID=EY659969; Name=EY659969; organism=Citrus sinensis; type=EST; length=897bp
AGTGGTAGCCGGAGGTACGGNNNGGAATTTTTCATTATGGGGGNGNNNGA
NNAGNNNTTTTCTGGAGGAGGGGNGNAAATATTANATATGGTAGGATTTT
ATGANGAGATTTTTTAGTTAAAAATATGGTGTGAAGAATAGAAAGTTGGT
ATGAATTGGATTGATGATTAGTATAAGGAAATAGAGAGAAATATTGTGGA
AAGTAAAGTAGAGGATGGTGATGTGATGGATGGGTTGGATGAGATAGTGA
AGTATTGGTTAGAGGGATTGGATGATATTGTAAAAGATGTTAGTGAATGT
ATTTTANTTGGTGATTAATTGTGGAAAAAGATGAATGTATTTGGGTATTT
NNAAGGAAATGTAAGGAGTGTGGGTTTGGGGGGTGAGATGTTGTGTATAG
GGTTTGAGGAGGATGGATGTGAATGGGTTAAGGTTGTAGGTAGCAAGTGA
ATTCTGATTAATTGTGATGGATTGGATGGGGAAAAGGAATGAGGATTAGT
ATTATTTTTGTTTTGTGGAATAGGAGGTGGTGTCTTGTAAGGAAGCACTT
GTGAATCACTAGTTTGGACTCTGGCAGCTGCAAGAGACAAAGTATTGGAA
AAACTTGGAGGAGGCTGTGACAATATTACTAAGTTGATTGTTTATGCATT
AGATCAAATATATGTCGCTCTTTAGAAATGTGCCAAATTAATTGGTATGG
CTGCAGCAAATTTTCGGCGTCTAAGCAGATGATTTTGAACTGAGTTTTGG
GTGTNACAGATACGGTTCGTGCTGCTGTCGAAGAGATATAAAATCTGGCT
AGTTGGAATTTATTATGTGTTACTGTTGGGACAACTGGGAAAGAAGAGTG
GATCCATTTGAGGAGTTCNGGAAAATTGGAAAGGATAGAAAGTGTGG
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