EY659962
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659962 vs. ExPASy Swiss-Prot
Match: CB21_PEA (Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1) HSP 1 Score: 326.635 bits (836), Expect = 1.189e-88 Identity = 166/222 (74.77%), Postives = 178/222 (80.18%), Query Frame = 1 Query: 184 TGSKSVSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAXEGYRIAGGPLGEVTDPLYPXGSFDPLGLADDPEAFAELRFXESEWKGCYXLHGWFLRSGHWHPA----RDR*RTLADTWAEPGNNMPW 837 T K SS SPW+G D VKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGA EGYRIAGGPLGEV DPLYP GSFDPLGLA+ PEAFAEL+ E + G + F G + PA + LAD A+P NN W Sbjct: 1 TTKKVASSSSPWHGPDGVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEVPEAFAELKVKELK-NGRLAMFSMF---GFFVPAIVTGKGPLENLADHLADPVNNNAW 218
BLAST of EY659962 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1) HSP 1 Score: 308.145 bits (788), Expect = 3.709e-88 Identity = 153/209 (73.21%), Postives = 169/209 (80.86%), Query Frame = 1 Query: 103 SSFVGKAVNLAPSGNELSN------GGRISMRKTGSKSVSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAXEGYRIAGGPLGEVTDPLYPXGSFDPLGLADDPEAFAELRFXE 711 S+F G+ S NEL GGR +MR+T + S WYG DR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++NGV FGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWA QVVLMG EGYR+ GGPLGE D +YP G+FDPLGLADDPEAFAEL+ E Sbjct: 9 SAFAGQTA--LKSQNELVRKIGSFGGGRATMRRTVKSAPQS--IWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKE 213 HSP 2 Score: 39.2762 bits (90), Expect = 3.709e-88 Identity = 20/48 (41.67%), Postives = 25/48 (52.08%), Query Frame = 2 Query: 722 RXAMXSMVGFFXQAIGTRQGTVRGLWPTLGPSLATTCLGLPHNFXPGK 865 R AM SM GFF QAI T +G + L+ + +A NF PGK Sbjct: 218 RLAMFSMFGFFVQAIVTGKGPIENLYDHVADPVANNAWAFATNFVPGK 265
BLAST of EY659962 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1) HSP 1 Score: 307.375 bits (786), Expect = 3.709e-88 Identity = 156/215 (72.56%), Postives = 171/215 (79.53%), Query Frame = 1 Query: 82 TSTMALSSSFVGKAVNLAPSGNEL-----SNGGRISMRKTGSKSVSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAXEGYRIAGGPLGEVTDPLYPXGSFDPLGLADDPEAFAELRFXE 711 T++ SSS G+ + L P NEL + RI+MR+T + S WYG DR KYLGPFS PSYLTGEFPGDYGWDTA +SADPETFAKNRELEVIHCRWAMLGALGCVFPELLA+NG+KFGEAVWFKAGAQIFSEGGLDY GNP+LIHAQSILAIWACQVVLMG EGYR+ GG LGE DPL P G+FDPLGLADDPEA AEL+ E Sbjct: 3 TASAIQSSSLAGQTL-LRPQQNELVKKVGTAQARITMRRTVRSAPES--IWYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFGEAVWFKAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGTLGEGLDPLLPGGAFDPLGLADDPEACAELKVKE 214 HSP 2 Score: 40.0466 bits (92), Expect = 3.709e-88 Identity = 21/48 (43.75%), Postives = 25/48 (52.08%), Query Frame = 2 Query: 722 RXAMXSMVGFFXQAIGTRQGTVRGLWPTLGPSLATTCLGLPHNFXPGK 865 R AM SM GFF QAI T +G + L+ L +A NF PGK Sbjct: 219 RLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANNAWAYATNFVPGK 266
BLAST of EY659962 vs. ExPASy Swiss-Prot
Match: CB23_ORYSJ (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1) HSP 1 Score: 308.531 bits (789), Expect = 4.839e-88 Identity = 153/214 (71.50%), Postives = 174/214 (81.31%), Query Frame = 1 Query: 85 STMALSSSFVGKAVNLAPSGNEL-----SNGGRISMRKTGSKSVSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAXEGYRIAGGPLGEVTDPLYPXGSFDPLGLADDPEAFAELRFXE 711 S + ++SF+G A P +EL +GGRI+MR+T + S WYG DR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWA QVVLMG EGYR+ GGPLGE D +YP G+FDPLGLADDP+ FAEL+ E Sbjct: 4 SALHQTTSFLGTA----PRRDELVRRVGDSGGRITMRRTVKSAPQS--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKE 211 HSP 2 Score: 38.5058 bits (88), Expect = 4.839e-88 Identity = 20/48 (41.67%), Postives = 25/48 (52.08%), Query Frame = 2 Query: 722 RXAMXSMVGFFXQAIGTRQGTVRGLWPTLGPSLATTCLGLPHNFXPGK 865 R AM SM GFF QAI T +G + L+ + +A NF PGK Sbjct: 216 RLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK 263
BLAST of EY659962 vs. ExPASy Swiss-Prot
Match: CB23_ORYSI (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1) HSP 1 Score: 308.531 bits (789), Expect = 4.839e-88 Identity = 153/214 (71.50%), Postives = 174/214 (81.31%), Query Frame = 1 Query: 85 STMALSSSFVGKAVNLAPSGNEL-----SNGGRISMRKTGSKSVSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAXEGYRIAGGPLGEVTDPLYPXGSFDPLGLADDPEAFAELRFXE 711 S + ++SF+G A P +EL +GGRI+MR+T + S WYG DR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWA QVVLMG EGYR+ GGPLGE D +YP G+FDPLGLADDP+ FAEL+ E Sbjct: 4 SALHQTTSFLGTA----PRRDELVRRVGDSGGRITMRRTVKSAPQS--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKE 211 HSP 2 Score: 38.5058 bits (88), Expect = 4.839e-88 Identity = 20/48 (41.67%), Postives = 25/48 (52.08%), Query Frame = 2 Query: 722 RXAMXSMVGFFXQAIGTRQGTVRGLWPTLGPSLATTCLGLPHNFXPGK 865 R AM SM GFF QAI T +G + L+ + +A NF PGK Sbjct: 216 RLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK 263
BLAST of EY659962 vs. ExPASy Swiss-Prot
Match: CB48_MAIZE (Chlorophyll a-b binding protein 48, chloroplastic OS=Zea mays GN=CAB48 PE=3 SV=1) HSP 1 Score: 322.013 bits (824), Expect = 2.928e-87 Identity = 167/256 (65.23%), Postives = 190/256 (74.22%), Query Frame = 1 Query: 85 STMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAXEGYRIAGGPLGEVTDPLYPXGSFDPLGLADDPEAFAELRFXE--SEWKGCYXLHGWFLRSGHWHPARDR*RTLADTWAEPGNNMPW 837 +TMA++S + VGK A ++ GRI+MRKT +K SGSPWYG DRV YLGP SG PPSYLTGEFPGDYGWDT GLSADPETFAKNRELEVIHCRWA+ LGCVFPELLARNGVKFGE VWFKAG+QIFSEGGL + GNPSL+HAQSILAIWACQVVLMGA EGY +AGG LGEV DPLY GSFDPLGL DDPE FAEL+ E + + + G+F+++ + LAD +P NN W Sbjct: 4 ATMAITSRALVGKP---AAGTRDVFGEGRITMRKTAAKPKPARSGSPWYGADRVLYLGPLSGSPPSYLTGEFPGDYGWDTEGLSADPETFAKNRELEVIHCRWAIAVGLGCVFPELLARNGVKFGEGVWFKAGSQIFSEGGLSHPGNPSLVHAQSILAIWACQVVLMGAVEGYHVAGGRLGEVVDPLYLGGSFDPLGLGDDPERFAELKVKEIKNGRLAMFSMFGFFVQA--IVTGKGPIENLADHLTDPVNNNAW 254
BLAST of EY659962 vs. ExPASy Swiss-Prot
Match: CB21_SILPR (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene pratensis PE=2 SV=2) HSP 1 Score: 316.235 bits (809), Expect = 1.606e-85 Identity = 159/208 (76.44%), Postives = 174/208 (83.65%), Query Frame = 1 Query: 82 TSTMALSSSFVGKAVNLAPSGNEL-----SNGGRISMRKTGSKSVSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAXEGYRIAGGPLGEVTDPLYPXGSFDPLGLADDPEAF 690 TST+ S+F G+ + L P NEL NGGR+SMR+T + S WYG DR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA+NGVKFGEAVWFKAG+QIF EGGLDYLGNP+L+HAQSILAIWACQVVLMGA EGYR+ GGPLGE D LYP G+FDPLGLA+DPEAF Sbjct: 3 TSTIQ-QSAFAGQTL-LKPQ-NELVRKVGGNGGRVSMRRTIKSAPES--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKFGEAVWFKAGSQIFQEGGLDYLGNPNLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDQLYPGGAFDPLGLAEDPEAF 205
BLAST of EY659962 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1) HSP 1 Score: 300.056 bits (767), Expect = 2.186e-85 Identity = 152/209 (72.73%), Postives = 167/209 (79.90%), Query Frame = 1 Query: 103 SSFVGKAVNLAPSGNEL----SNGG--RISMRKTGSKSVSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAXEGYRIAGGPLGEVTDPLYPXGSFDPLGLADDPEAFAELRFXE 711 S+F GK GNE N G R +MR+T + S WYG DR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGC FPELL +NGVKFGEAVWFKAG+QIF+EGGLDYLGNP+LIHAQSILAIWA QVVLMG EGYR+ GGPLGE DPLYP G+FDPLGLADDP++FAEL+ E Sbjct: 9 SAFTGKTG--LRQGNEFIRKRGNFGQARFTMRRTVKSAPES--IWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPDSFAELKVKE 213 HSP 2 Score: 38.1206 bits (87), Expect = 2.186e-85 Identity = 19/48 (39.58%), Postives = 26/48 (54.17%), Query Frame = 2 Query: 722 RXAMXSMVGFFXQAIGTRQGTVRGLWPTLGPSLATTCLGLPHNFXPGK 865 R AM SM GFF QAI T +G ++ L+ + +A NF PG+ Sbjct: 218 RLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANNAWAFATNFVPGQ 265
BLAST of EY659962 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1) HSP 1 Score: 311.227 bits (796), Expect = 5.168e-84 Identity = 158/227 (69.60%), Postives = 180/227 (79.30%), Query Frame = 1 Query: 163 GRISMRKTGSKSVSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAXEGYRIAGGPLGEVTDPLYPXGSFDPLGLADDPEAFAELRFXE--SEWKGCYXLHGWFLRSGHWHPARDR*RTLADTWAEPGNNMPW 837 GR SMR+T K+V S WYG DR K+LGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGC+FPELL++NGV+FGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWA QVVLMG EGYR+ GGPLGE DPLYP G+FDPLGLADDPEAFAEL+ E + + + G+F+++ + LAD A+P N W Sbjct: 32 GRFSMRRT-VKAVPQ-SIWYGADRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQA--IVTGKGPIENLADHIADPVANNAW 254
BLAST of EY659962 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 310.457 bits (794), Expect = 8.815e-84 Identity = 153/198 (77.27%), Postives = 167/198 (84.34%), Query Frame = 1 Query: 250 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAXEGYRIAGGPLGEVTDPLYPXGSFDPLGLADDPEAFAELRFXE--SEWKGCYXLHGWFLRSGHWHPARDR*RTLADTWAEPGNNMPW 837 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH WAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGA EGYRIAGGPLGEVTDP+YP GSFDPLGLADDPEAFAEL+ E + + + G+F+++ + LAD A+P NN W Sbjct: 1 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQA--IVTGKGPLENLADHLADPVNNNAW 196 The following BLAST results are available for this feature:
BLAST of EY659962 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659962 ID=EY659962; Name=EY659962; organism=Citrus sinensis; type=EST; length=911bpback to top |