EY659953

Overview
NameEY659953
Unique NameEY659953
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length861
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659953 vs. ExPASy Swiss-Prot
Match: S22A6_MOUSE (Solute carrier family 22 member 6 OS=Mus musculus GN=Slc22a6 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.404e-11
Identity = 55/255 (21.57%), Postives = 108/255 (42.35%), Query Frame = 1
Query:   34 IPAFVLLIFLDFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLAXXXXXXXXXXXXXXXXXENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSM--TIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVXKIXGMVCPSVAV 792
            +P FV  I+  F  ES R+  + GR+      L ++A+ N        L+ +                L +S +K  T+ K   S+  +L  P   +  + L +L+F  SF YYG+V+                         S+Y+   I    +LP      L+++ +GR+ +   +++   +CI +  ++     I+ T+L    +     +F    ++  E+YPT +R TG G+   + ++  +V P +++
Sbjct:  250 VPFFVAFIYSWFFIESARWYSSSGRLDLTLRALQRVARINGKQEEGAKLSIE---------------VLQTSLQKELTLNKGQASAMELLRCPTLRRLFLCLSMLWFATSFAYYGLVMDLQGF------------------GVSMYLIQVIFGAVDLPAKFVCFLVINSMGRRPAQLASLLLAGICILVNGIIPRGHTIIRTSLAVLGKGCLASSFNCIFLYTGELYPTMIRQTGLGMGSTMARVGSIVSPLISM 471          
BLAST of EY659953 vs. ExPASy Swiss-Prot
Match: S22A6_HUMAN (Solute carrier family 22 member 6 OS=Homo sapiens GN=SLC22A6 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.395e-11
Identity = 57/254 (22.44%), Postives = 106/254 (41.73%), Query Frame = 1
Query:   37 PAFVLLIFLDFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLAXXXXXXXXXXXXXXXXXENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSM--TIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVXKIXGMVCPSVAV 792
            P F   I+  F  ES R+  + GR+      L ++A+ N        L+ +                L +S +K  T+ K   S+  +L  P      + L +L+F  SF YYG+V+                         S+Y+   I    +LP  L   L+++ +GR+ +    ++   +CI L  ++    +I+ T+L    +     +F    ++  E+YPT +R TG G+   + ++  +V P V++
Sbjct:  257 PFFAFFIYSWFFIESARWHSSSGRLDLTLRALQRVARINGKREEGAKLSME---------------VLRASLQKELTMGKGQASAMELLRCPTLRHLFLCLSMLWFATSFAYYGLVMDLQGF------------------GVSIYLIQVIFGAVDLPAKLVGFLVINSLGRRPAQMAALLLAGICILLNGVIPQDQSIVRTSLAVLGKGCLAASFNCIFLYTGELYPTMIRQTGMGMGSTMARVGSIVSPLVSM 477          
BLAST of EY659953 vs. ExPASy Swiss-Prot
Match: S22A6_RAT (Solute carrier family 22 member 6 OS=Rattus norvegicus GN=Slc22a6 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.128e-11
Identity = 55/255 (21.57%), Postives = 107/255 (41.96%), Query Frame = 1
Query:   34 IPAFVLLIFLDFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLAXXXXXXXXXXXXXXXXXENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSM--TIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVXKIXGMVCPSVAV 792
            +P F+  I+  F  ES R+  + GR+      L ++A+ N        L+ +                L +S +K  T+ K   S+  +L  P      + L +L+F  SF YYG+V+                         S+Y+   I    +LP      L+++ +GR+ +   +++   +CI +  ++     I+ T+L    +     +F    ++  E+YPT +R TG G+   + ++  +V P V++
Sbjct:  256 VPFFIAFIYSWFFIESARWYSSSGRLDLTLRALQRVARINGKQEEGAKLSIE---------------VLRTSLQKELTLSKGQASAMELLRCPTLRHLFLCLSMLWFATSFAYYGLVMDLQGF------------------GVSMYLIQVIFGAVDLPAKFVCFLVINSMGRRPAQMASLLLAGICILVNGIIPKSHTIIRTSLAVLGKGCLASSFNCIFLYTGELYPTVIRQTGLGMGSTMARVGSIVSPLVSM 477          
BLAST of EY659953 vs. ExPASy Swiss-Prot
Match: S22A1_MOUSE (Solute carrier family 22 member 1 OS=Mus musculus GN=Slc22a1 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.128e-11
Identity = 61/259 (23.55%), Postives = 115/259 (44.40%), Query Frame = 1
Query:   34 IPAFVLLIFLDFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLF-SPRFFKTTILLWVLYFGNSFVYYGIVLLAXXXXXXXXXXXXXXXXXENVQDASVYINVFITSFAELPGLLTAALLVDRVGR--KLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVXKIXGMVCPSVAVGLV 801
            +P F+ L++  F+PESPR+L ++ R T A  I+++IAQ N+   P+           D +    EE     ++ +R+        SF  LF +P   K T++L  L+F  + +Y G+++                        A++Y++ F +S  E P      + +DR+GR   ++ + +       L+  +  + + L   L    RM +     +  +   E+YPT +R+ G  V  A+  + G+  P +   L+
Sbjct:  271 LPTFLFLLYYWFVPESPRWLLSQKRTTQAVRIMEQIAQKNRKVPPA-----------DLKMMCLEE----DASERRS-------PSFADLFRTPSLRKHTLILMYLWFSCAVLYQGLIM------------------HVGATGANLYLDFFYSSLVEFPAAFIILVTIDRIGRIYPIAASNLVAGAACLLMIFIPHELHWLNVTLACLGRMGATIVLQMVCLVNAELYPTFIRNLGMMVCSALCDLGGIFTPFMVFRLM 489          
BLAST of EY659953 vs. ExPASy Swiss-Prot
Match: S22A8_RABIT (Solute carrier family 22 member 8 OS=Oryctolagus cuniculus GN=SLC22A8 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.100e-11
Identity = 57/257 (22.18%), Postives = 110/257 (42.80%), Query Frame = 1
Query:   34 IPAFVLLIFLDFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLAXXXXXXXXXXXXXXXXXENVQD--ASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPL--VTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVXKIXGMVCPSVAV 792
            +P F+  +   ++PES R+L   G+ + A  IL ++A FN            G  +  E+ S  E   L  S +K  ++ K+ +S+  +  +P   + T+ L + +F   F YY + +                     V++   ++YI   I    ++P      L +  +GR ++     I     +L L  V +  ++L T L    +    G+F    ++  E++PT +R TG G++    ++  M+ P V +
Sbjct:  244 VPYFIFSLLSWWIPESIRWLVLAGKSSKALKILRRVATFN------------GKKEEGEKLSLEE---LKLSLQKDISLAKAKYSTADLFRTPILRRVTLCLSLAWFATGFAYYSLAM--------------------GVEEFGVNIYILQIIFGGVDIPAKFITILSLSYLGRHITQGAALILAGAAILSLIFVPMDMSLLRTILAVFGKGCLSGSFSCLFLYTSELFPTVIRQTGMGISNVWARVGSMISPLVKI 465          
The following BLAST results are available for this feature:
BLAST of EY659953 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
S22A6_MOUSE1.404e-1121.57Solute carrier family 22 member 6 OS=Mus musculus ... [more]
S22A6_HUMAN2.395e-1122.44Solute carrier family 22 member 6 OS=Homo sapiens ... [more]
S22A6_RAT3.128e-1121.57Solute carrier family 22 member 6 OS=Rattus norveg... [more]
S22A1_MOUSE3.128e-1123.55Solute carrier family 22 member 1 OS=Mus musculus ... [more]
S22A8_RABIT9.100e-1122.18Solute carrier family 22 member 8 OS=Oryctolagus c... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-H08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659953 ID=EY659953; Name=EY659953; organism=Citrus sinensis; type=EST; length=861bp
TTACAAAAAGAGGTGGCTACTTGCTTTGTCTGAATACCTGCATTTGTTCT
GCTTATTTTCCTTGATTTCATGCCAGAGTCTCCAAGATATCTATGTACAA
AAGGTAGAATAACTGATGCGCATAATATTCTGGATAAAATAGCTCAATTC
AACCAAACAAGCCTCCCTTCTGGCAACCTTACTTCTGATGGAACAAATGA
TCTGGATGAAGAATTTTCTACATCAGAAGAGACTCCTCTACTCTCTTCAG
CTAGAAAAAGGACCACAGTCCGCAAATCAGGCTTCTCATCCTTTCTAATG
TTGTTCTCACCAAGATTTTTTAAAACAACCATTCTATTGTGGGTATTATA
CTTTGGCAATTCATTCGTCTATTATGGTATTGTATTGCTGGCATCTGAAC
TGAGCGGCAGTCAAAGTAAATGTAGCTCAAGCATCTTGCTTTCAGAAAAT
GTGCAGGATGCTAGTGTCTACATAAATGTATTCATCACTAGCTTTGCAGA
GCTACCTGGACTTCTTACAGCTGCATTACTTGTGGACAGAGTGGGTCGCA
AGCTTTCCATGACAATTATGTTTATCTTTGTATGTATTTTCCTGCTTCCA
CTGGTTACACTTCAGTCCAACATTTTGCTAACAGCATTATTATCCGGAGC
TCGCATGTTCTCTATGGGAACCTTTATTATCGCCAACATTTTTGCCCCCG
AGATATATCCAACTTCTATGAGATCAACTGGTGCTGGAGTTGCGTATGCT
GTANGAAAGATTGNTGGTATGGTATGCCCCTCTGTAGCTGTTGGACTAGT
GACTAGNTGCCATCAAACAGCTGCAATACTTCTATTAGAGGCTNNCTATG
TACTTTCAGAA
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