EY659938

Overview
NameEY659938
Unique NameEY659938
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length952
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659938 vs. ExPASy Swiss-Prot
Match: EF1A_ASPOR (Elongation factor 1-alpha OS=Aspergillus oryzae GN=tef1 PE=3 SV=1)

HSP 1 Score: 341.658 bits (875), Expect = 3.783e-93
Identity = 171/213 (80.28%), Postives = 188/213 (88.26%), Query Frame = 3
Query:  108 MGKETT-HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIEKSTNLDWYR 743
            MGKE   HINIVVIGHVDSGKSTTTGHLIYK GGID+R IE+FEKEAAE+ K SFKYAWVLDKLK+ERERGITIDIALWKF+T+KY  TVIDAPGHRDFIKNMITGTSQADCA+LII S TG FEAGISKDGQTREHALLAFTLGV+Q+I   NKMD  T K+S+ RY+EIVKE S+++KKVGYNP+ VPFVPISGF GDNMIE STN  WY+
Sbjct:    1 MGKEDKQHINIVVIGHVDSGKSTTTGHLIYKCGGIDQRTIEKFEKEAAELGKGSFKYAWVLDKLKSERERGITIDIALWKFQTSKYEVTVIDAPGHRDFIKNMITGTSQADCAILIIASGTGEFEAGISKDGQTREHALLAFTLGVRQLIVALNKMD--TCKWSQDRYNEIVKETSNFIKKVGYNPKSVPFVPISGFNGDNMIEASTNCPWYK 211          
BLAST of EY659938 vs. ExPASy Swiss-Prot
Match: EF1A_SORMA (Elongation factor 1-alpha OS=Sordaria macrospora GN=TEF PE=3 SV=1)

HSP 1 Score: 340.887 bits (873), Expect = 6.454e-93
Identity = 168/213 (78.87%), Postives = 186/213 (87.32%), Query Frame = 3
Query:  108 MGKET-THINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIEKSTNLDWYR 743
            MGKE   HIN+VVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEAAE+ K SFKYAWVLDKLKAERERGITIDIALWKFET KYY TVIDAPGHRDFIKNMITGTSQADCA+LII + TG FEAGISKDGQTREHALLA+TLGVKQ+I   NKMD T  ++S+AR++EI+KE  +++KKVGYNP  V FVPISGF GDNM+E STN  WY+
Sbjct:    1 MGKEDKAHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKGSFKYAWVLDKLKAERERGITIDIALWKFETPKYYVTVIDAPGHRDFIKNMITGTSQADCAILIIAAGTGEFEAGISKDGQTREHALLAYTLGVKQLIVAINKMDTT--QWSQARFEEIIKETKNFIKKVGYNPATVAFVPISGFNGDNMLEASTNCPWYK 211          
BLAST of EY659938 vs. ExPASy Swiss-Prot
Match: EF1A_NEUCR (Elongation factor 1-alpha OS=Neurospora crassa GN=tef-1 PE=3 SV=2)

HSP 1 Score: 340.887 bits (873), Expect = 6.454e-93
Identity = 168/213 (78.87%), Postives = 186/213 (87.32%), Query Frame = 3
Query:  108 MGKET-THINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIEKSTNLDWYR 743
            MGKE  THIN+VVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEAAE+ K SFKYAWVLDKLKAERERGITIDIALWKFET KYY TVIDAPGHRDFIKNMITGTSQADCA+LII + TG FEAGISKDGQTREHALLA+TLGVKQ+I   NKMD T  ++S+ R++EI+KE  +++KKVGYNP  V FVPISGF GDNM+E STN  WY+
Sbjct:    1 MGKEDKTHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKGSFKYAWVLDKLKAERERGITIDIALWKFETPKYYVTVIDAPGHRDFIKNMITGTSQADCAILIIAAGTGEFEAGISKDGQTREHALLAYTLGVKQLIVAINKMDTT--QWSQTRFEEIIKETKNFIKKVGYNPAGVAFVPISGFNGDNMLEPSTNCPWYK 211          
BLAST of EY659938 vs. ExPASy Swiss-Prot
Match: EF1A_PUCGR (Elongation factor 1-alpha OS=Puccinia graminis GN=TEF PE=3 SV=2)

HSP 1 Score: 340.117 bits (871), Expect = 1.101e-92
Identity = 166/212 (78.30%), Postives = 188/212 (88.68%), Query Frame = 3
Query:  108 MGKETTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIEKSTNLDWYR 743
            MGKE  H+N+VVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEAAE+ K SFKYAWVLDKLKAERERGITIDIALWKFET KYY TVIDAPGHRDFIKNMITGTSQADCA+LII + TG FEAGISKDGQTREHALLAFTLGV+Q+I   NKMD T  K+S+ R+ EIVKE S+++KKVGYNP+ + FVPISG+ GDNM+E+STN+ W++
Sbjct:    1 MGKEKNHVNVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKGSFKYAWVLDKLKAERERGITIDIALWKFETPKYYVTVIDAPGHRDFIKNMITGTSQADCAILIIAAGTGEFEAGISKDGQTREHALLAFTLGVRQLIVAINKMDTT--KWSEQRF-EIVKETSNFVKKVGYNPKSIAFVPISGWHGDNMLEESTNMGWFK 209          
BLAST of EY659938 vs. ExPASy Swiss-Prot
Match: EF1A_CRYNE (Elongation factor 1-alpha OS=Cryptococcus neoformans GN=TEF1 PE=2 SV=2)

HSP 1 Score: 340.117 bits (871), Expect = 1.101e-92
Identity = 163/212 (76.89%), Postives = 187/212 (88.21%), Query Frame = 3
Query:  108 MGKETTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIEKSTNLDWYR 743
            MGK+  H+N+VVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA E+ K SFKYAWVLDKLKAERERGITIDIALWKFET +Y  TVIDAPGHRDFIKNMITGTSQADCA+LII +  G FEAGISKDGQTREHALLAFTLGV+Q+I  CNKMD  T K+S+ R++EIVKE + ++KKVGYNP+ VPFVPISG+ GDNM+E++TN+ WY+
Sbjct:    1 MGKDKLHVNVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQELGKSSFKYAWVLDKLKAERERGITIDIALWKFETPRYQVTVIDAPGHRDFIKNMITGTSQADCAILIIATGIGEFEAGISKDGQTREHALLAFTLGVRQLIVACNKMD--TCKWSEDRFNEIVKETNGFIKKVGYNPKAVPFVPISGWHGDNMLEETTNMPWYK 210          
BLAST of EY659938 vs. ExPASy Swiss-Prot
Match: EF1A_PIRIN (Elongation factor 1-alpha OS=Piriformospora indica GN=TEF1 PE=2 SV=1)

HSP 1 Score: 339.732 bits (870), Expect = 1.438e-92
Identity = 166/212 (78.30%), Postives = 185/212 (87.26%), Query Frame = 3
Query:  108 MGKETTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIEKSTNLDWYR 743
            MGKE  H+N+VVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEAAE+ K SFKYAWVLDKLKAERERGITIDIALWK ET KY  TVIDAPGHRDFIKNMITGTSQADCA+LII   TG FEAGISKDGQTREHALLAFTLGV+Q+I   NKMD T   +S+AR++EIVKE S+++KKVGYNP+ V FVPISG+ GDNM+E STN+ WY+
Sbjct:    1 MGKEKAHVNVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKGSFKYAWVLDKLKAERERGITIDIALWKSETPKYMVTVIDAPGHRDFIKNMITGTSQADCAILIIAGGTGEFEAGISKDGQTREHALLAFTLGVRQLIVAVNKMDTT--NWSEARFNEIVKETSNFIKKVGYNPKTVAFVPISGWHGDNMLEPSTNMPWYK 210          
BLAST of EY659938 vs. ExPASy Swiss-Prot
Match: EF1A_HYDAT (Elongation factor 1-alpha OS=Hydra attenuata PE=2 SV=1)

HSP 1 Score: 339.732 bits (870), Expect = 1.438e-92
Identity = 164/210 (78.10%), Postives = 185/210 (88.10%), Query Frame = 3
Query:  114 KETTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIEKSTNLDWYR 743
            K   HINIVVIGHVDSGKST+TGH+IYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAERERGITIDIALWKFETTKY  T+IDAPGHRDFIKNMITGTSQADCAVLI+ S+TG FEAGISK+GQTREHALLAFTLGVKQMI   NK+D T P YS+AR++EI KE+S+Y+KKVGY+P+ VP +P+SG+ GDNMIE S N+ WY+
Sbjct:    4 KVKPHINIVVIGHVDSGKSTSTGHMIYKCGGIDKRQIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETTKYVVTIIDAPGHRDFIKNMITGTSQADCAVLIVASSTGEFEAGISKNGQTREHALLAFTLGVKQMIVAVNKIDNTEPPYSEARFNEIKKEISAYVKKVGYDPKTVPVLPVSGWHGDNMIEPSPNMSWYK 213          
BLAST of EY659938 vs. ExPASy Swiss-Prot
Match: EF1A1_EUPCR (Elongation factor 1-alpha 1 OS=Euplotes crassus GN=EFA1 PE=3 SV=1)

HSP 1 Score: 339.732 bits (870), Expect = 1.438e-92
Identity = 177/263 (67.30%), Postives = 201/263 (76.43%), Query Frame = 3
Query:  108 MGKETTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIEKSTNLDWYRVQP-CWMLXDIS*AEEPSDSPF------VCTSGRVQIVALEPSSGRVETGV 875
            MGKE  H+N+VVIGHVDSGKSTTTGHLIYKLGGID R IE+FEKE+AEM K SFKYAWVLDKLKAERERGITIDIALWKFET   + T+IDAPGHRDFIKNMITGTSQAD A+LII S TG FEAGISK+GQTREHALLA+T+GVKQM+   NKMD+T P YS+ RY+EI KEVS++L KVGY P K+ FVPISGF+GDN+ E STN+ WY+    C  L      + P   P       V   G +  V +    GRVETGV
Sbjct:    1 MGKEKEHLNLVVIGHVDSGKSTTTGHLIYKLGGIDARTIEKFEKESAEMGKASFKYAWVLDKLKAERERGITIDIALWKFETENRHYTIIDAPGHRDFIKNMITGTSQADAAILIIASGTGEFEAGISKEGQTREHALLAYTMGVKQMVVAMNKMDSTEPPYSEDRYEEIKKEVSTFLAKVGYKPAKMNFVPISGFQGDNIQENSTNMPWYKGPTLCAALDSFKIPKRPIAKPLRLPLQDVYKIGGIGTVPV----GRVETGV 259          
BLAST of EY659938 vs. ExPASy Swiss-Prot
Match: EF1A_TRIRE (Elongation factor 1-alpha OS=Trichoderma reesei GN=tef1 PE=3 SV=1)

HSP 1 Score: 338.576 bits (867), Expect = 3.203e-92
Identity = 167/213 (78.40%), Postives = 186/213 (87.32%), Query Frame = 3
Query:  108 MGKET-THINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIEKSTNLDWYR 743
            MGKE  THIN+VVIGHVDSGKSTTTGHLIY+ GGIDKR IE+FEKEAAE+ K SFKYAWVLDKLKAERERGITIDIALWKFET KYY TVIDAPGHRDFIKNMITGTSQADCA+LII + TG FEAGISKDGQTREHALLA+TLGVKQ+I   NKMD  T  +++ARY EI+KE S+++KKVG+NP+ V FVPISGF GDNM+  STN  WY+
Sbjct:    1 MGKEDKTHINVVVIGHVDSGKSTTTGHLIYQCGGIDKRTIEKFEKEAAELGKGSFKYAWVLDKLKAERERGITIDIALWKFETPKYYVTVIDAPGHRDFIKNMITGTSQADCAILIIAAGTGEFEAGISKDGQTREHALLAYTLGVKQLIVAINKMD--TANWAEARYQEIIKETSNFIKKVGFNPKAVAFVPISGFNGDNMLTPSTNCPWYK 211          
BLAST of EY659938 vs. ExPASy Swiss-Prot
Match: EF1A_PLAFK (Elongation factor 1-alpha OS=Plasmodium falciparum (isolate K1 / Thailand) GN=MEF-1 PE=3 SV=1)

HSP 1 Score: 330.872 bits (847), Expect = 6.678e-90
Identity = 170/259 (65.64%), Postives = 200/259 (77.22%), Query Frame = 3
Query:  108 MGKETTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIEKSTNLDWYRVQPCWMLXD-IS*AEEPSDSPF-VCTSGRVQIVAL-EPSSGRVETGV 875
            MGKE THIN+VVIGHVDSGKSTTTGH+IYKLGGID+R IE+FEKE+AEM K SFKYAWVLDKLKAERERGITIDIALWKFET +Y+ TVIDAPGH+DFIKNMITGTSQAD A+L++ +  GGF+   SK+GQT+EH LLAFTLGVKQ++   NKMD  T KYS+ RY+EI KEV  YLKKVGY  +KV F+PISGFEGDN+IEKS    WY+ +      D +   + P D P  +   G  +I  +     GRVETG+
Sbjct:    1 MGKEKTHINLVVIGHVDSGKSTTTGHIIYKLGGIDRRTIEKFEKESAEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETPRYFFTVIDAPGHKDFIKNMITGTSQADVALLVVPADVGGFDGAFSKEGQTKEHVLLAFTLGVKQIVVGVNKMD--TVKYSEDRYEEIKKEVKDYLKKVGYQADKVDFIPISGFEGDNLIEKSDKTPWYKGRTLIEALDTMQPPKRPYDKPLRIPLQGVYKIGGIGTVPVGRVETGI 257          
The following BLAST results are available for this feature:
BLAST of EY659938 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EF1A_ASPOR3.783e-9380.28Elongation factor 1-alpha OS=Aspergillus oryzae GN... [more]
EF1A_SORMA6.454e-9378.87Elongation factor 1-alpha OS=Sordaria macrospora G... [more]
EF1A_NEUCR6.454e-9378.87Elongation factor 1-alpha OS=Neurospora crassa GN=... [more]
EF1A_PUCGR1.101e-9278.30Elongation factor 1-alpha OS=Puccinia graminis GN=... [more]
EF1A_CRYNE1.101e-9276.89Elongation factor 1-alpha OS=Cryptococcus neoforma... [more]
EF1A_PIRIN1.438e-9278.30Elongation factor 1-alpha OS=Piriformospora indica... [more]
EF1A_HYDAT1.438e-9278.10Elongation factor 1-alpha OS=Hydra attenuata PE=2 ... [more]
EF1A1_EUPCR1.438e-9267.30Elongation factor 1-alpha 1 OS=Euplotes crassus GN... [more]
EF1A_TRIRE3.203e-9278.40Elongation factor 1-alpha OS=Trichoderma reesei GN... [more]
EF1A_PLAFK6.678e-9065.64Elongation factor 1-alpha OS=Plasmodium falciparum... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-G05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659938 ID=EY659938; Name=EY659938; organism=Citrus sinensis; type=EST; length=952bp
ACTGGACGCCTGCAGACCGGTCCGGATTCCTTCAACAACCACGCGTCCGT
GCTTGCTCTTCCGATAAGATTAACTGTCTCTTCGAAGTTTCAGTTAATTT
AACAGCCATGGGTAAGGAGACGACTCACATCAACATTGTGGTGATTGGCC
ATGTCGACTCTGGAAAGTCAACCACCACCGGACACTTGATCTACAAGCTT
GGTGGTATTGACAAGCGTGTGATCGAGAGGTTCGAGAAGGAAGCTGCTGA
GATGAACAAGAGGTCATTCAAGTATGCCTGGGTGCTCGACAAGCTCAAGG
CTGAGCGTGAACGTGGTATTACCATTGATATTGCCTTGTGGAAGTTCGAG
ACCACCAAGTACTACTGCACCGTCATTGATGCTCCTGGACATCGTGACTT
TATCAAGAACATGATTACCGGTACCTCACAGGCTGACTGTGCCGTCCTTA
TCATTGACTCCACCACCGGTGGTTTTGAAGCTGGTATCTCCAAGGATGGT
CAGACTCGTGAGCATGCTTTGCTTGCTTTCACCCTTGGTGTGAAGCAGAT
GATTTGCTGCTGTAACAAGATGGACGCCACCACCCCCAAGTACTCAAAGG
CTAGGTACGATGAAATTGTGAAGGAGGTCTCTTCCTACCTGAAGAAGGTT
GGATACAACCCCGAGAAAGTCCCATTCGTGCCCATCTCTGGTTTCGAGGG
TGACAACATGATTGAGAAGTCTACCAACCTTGACTGGTACAGGGTCCAAC
CCTGCTGGATGCTCNNTGACATATCATGAGCCGAAGAGCCCTCAGACAGC
CCCTTCGTCTGCACTTCAGGACGTGTACAGATTGTTGCATTGGAACCGTC
CAGTGGGCGCGTTGAGACCGGGGTCTCAAGCCTTGAATGGGGTGACATTT
GGCCCCTCTGGATGACAATGAAGGTAAGCTGGTGGATGCCCACGAACTCT
GA
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