EY659914

Overview
NameEY659914
Unique NameEY659914
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length926
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY659914_ssr338 microsatellite EY659914_ssr338:338..349. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: RAX3_ARATH (Transcription factor RAX3 OS=Arabidopsis thaliana GN=RAX3 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.918e-42
Identity = 76/118 (64.41%), Postives = 94/118 (79.66%), Query Frame = 2
Query:  122 MGRAPCCDKSGLKKGPWTPEEDQKLIDYIQKHGYG-NWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLL 472
            MGRAPCCDK+ +KKGPW+PEED KL  YI+  G G NW  LP+  GL+RCGKSCRLRW NYLRP+IK G F+ EEE  I  L+  +G++WS IAA+LPGRTDN+IKNYWNT ++K+L+
Sbjct:    1 MGRAPCCDKANVKKGPWSPEEDAKLKSYIENSGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEENIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLI 118          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: RAX2_ARATH (Transcription factor RAX2 OS=Arabidopsis thaliana GN=RAX2 PE=1 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.811e-42
Identity = 77/127 (60.63%), Postives = 95/127 (74.80%), Query Frame = 2
Query:  122 MGRAPCCDKSGLKKGPWTPEEDQKLIDYIQKHGYG-NWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTH 499
            MGRAPCCDK+ +K+GPW+PEED KL DYI+K G G NW  LP  AGL+RCGKSCRLRW NYLRP+I+ G F  EE+  I  L + +G++WS IAA L GRTDN+IKNYWNT ++K+L+     P  H
Sbjct:    1 MGRAPCCDKANVKRGPWSPEEDAKLKDYIEKQGTGGNWIALPHKAGLRRCGKSCRLRWLNYLRPNIRHGDFTEEEDNIIYSLFASIGSRWSVIAAHLQGRTDNDIKNYWNTKLKKKLIATMAPPPHH 127          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYB3_HORVU (Myb-related protein Hv33 OS=Hordeum vulgare GN=MYB2 PE=2 SV=3)

HSP 1 Score: 170.629 bits (431), Expect = 1.109e-41
Identity = 73/117 (62.39%), Postives = 95/117 (81.20%), Query Frame = 2
Query:  155 LKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHSP 505
            ++KG W+PEED+KL ++I +HG G W ++P+ A L RCGKSCRLRW NYLRPD+KRG F+ +EE+ I+ LH ILGN+WS IA+ LPGRTDNEIKN+WN+ I+K+L + GIDP TH P
Sbjct:   14 VRKGLWSPEEDEKLYNHIIRHGVGCWSSVPRLAALNRCGKSCRLRWINYLRPDLKRGCFSQQEEDHIVALHQILGNRWSQIASHLPGRTDNEIKNFWNSCIKKKLRQQGIDPATHKP 130          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYBC_MAIZE (Anthocyanin regulatory C1 protein OS=Zea mays GN=C1 PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.448e-41
Identity = 71/115 (61.74%), Postives = 91/115 (79.13%), Query Frame = 2
Query:  122 MGRAPCCDKSGLKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKR 466
            MGR  CC K G+K+G WT +ED  L  Y++ HG G WR +P+ AGL+RCGKSCRLRW NYLRP+I+RG  +++EE+ II+LH +LGN+WS IA RLPGRTDNEIKNYWN+ + +R
Sbjct:    1 MGRRACCAKEGVKRGAWTSKEDDALAAYVKAHGEGKWREVPQKAGLRRCGKSCRLRWLNYLRPNIRRGNISYDEEDLIIRLHRLLGNRWSLIAGRLPGRTDNEIKNYWNSTLGRR 115          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYB46_ARATH (Transcription factor MYB46 OS=Arabidopsis thaliana GN=MYB46 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.601e-40
Identity = 74/108 (68.52%), Postives = 90/108 (83.33%), Query Frame = 2
Query:  155 LKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRM 478
            +KKG W+PEED KL+ Y+  +G G W  + KNAGLQRCGKSCRLRW NYLRPD+KRG F+ +EE+ II+ HSILGN+WS IAARLPGRTDNEIKN+WN+ I+KRL +M
Sbjct:   18 MKKGLWSPEEDSKLMQYMLSNGQGCWSDVAKNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEEDLIIRFHSILGNRWSQIAARLPGRTDNEIKNFWNSTIKKRLKKM 125          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: GAM1_ORYSJ (Transcription factor GAMYB OS=Oryza sativa subsp. japonica GN=GAM1 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 1.038e-39
Identity = 74/110 (67.27%), Postives = 86/110 (78.18%), Query Frame = 2
Query:  155 LKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMGI 484
            LKKGPWT  ED  L+DY++KHG GNW  + KN GL RCGKSCRLRW N+LRP++K+G F  EEE  IIQLHS +GNKW+ +AA LPGRTDNEIKNYWNT I KR  R G+
Sbjct:   40 LKKGPWTSAEDAILVDYVKKHGEGNWNAVQKNTGLFRCGKSCRLRWANHLRPNLKKGAFTAEEERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNYWNTRI-KRCQRAGL 148          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: GAM1_ORYSI (Transcription factor GAMYB OS=Oryza sativa subsp. indica GN=GAM1 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 1.038e-39
Identity = 74/110 (67.27%), Postives = 86/110 (78.18%), Query Frame = 2
Query:  155 LKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMGI 484
            LKKGPWT  ED  L+DY++KHG GNW  + KN GL RCGKSCRLRW N+LRP++K+G F  EEE  IIQLHS +GNKW+ +AA LPGRTDNEIKNYWNT I KR  R G+
Sbjct:   40 LKKGPWTSAEDAILVDYVKKHGEGNWNAVQKNTGLFRCGKSCRLRWANHLRPNLKKGAFTAEEERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNYWNTRI-KRCQRAGL 148          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: TT2_ARATH (Transcription factor TT2 OS=Arabidopsis thaliana GN=TT2 PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.147e-38
Identity = 71/105 (67.62%), Postives = 84/105 (80.00%), Query Frame = 2
Query:  155 LKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRL 469
            L +G WT  ED+ L DYI  HG G W TLP  AGL+RCGKSCRLRW NYLRP IKRG  + +EEE II+LH++LGN+WS IA RLPGRTDNEIKN+WN+++RKRL
Sbjct:   14 LNRGAWTDHEDKILRDYITTHGEGKWSTLPNQAGLKRCGKSCRLRWKNYLRPGIKRGNISSDEEELIIRLHNLLGNRWSLIAGRLPGRTDNEIKNHWNSNLRKRL 118          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: WER_ARATH (Transcription factor WER OS=Arabidopsis thaliana GN=WER PE=1 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 9.713e-38
Identity = 65/104 (62.50%), Postives = 84/104 (80.77%), Query Frame = 2
Query:  158 KKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRL 469
            KKG WT EED+ L+DY++ HG G+W  + K  GL+RCGKSCRLRW NYL P++KRG F  +EE+ II+LH +LGN+WS IA R+PGRTDN++KNYWNTH+ K+L
Sbjct:   17 KKGLWTVEEDKILMDYVKAHGKGHWNRIAKKTGLKRCGKSCRLRWMNYLSPNVKRGNFTEQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSKKL 120          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYB23_ARATH (Transcription factor MYB23 OS=Arabidopsis thaliana GN=MYB23 PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.826e-37
Identity = 64/104 (61.54%), Postives = 83/104 (79.81%), Query Frame = 2
Query:  158 KKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRL 469
            KKG WT EED+ L+DY++ HG G+W  + K  GL+RCGKSCRLRW NYL P++ RG F  +EE+ II+LH +LGN+WS IA R+PGRTDN++KNYWNTH+ K+L
Sbjct:   13 KKGLWTVEEDKILMDYVRTHGQGHWNRIAKKTGLKRCGKSCRLRWMNYLSPNVNRGNFTDQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSKKL 116          
The following BLAST results are available for this feature:
BLAST of EY659914 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 74
Match NameE-valueIdentityDescription
RAX3_ARATH2.918e-4264.41Transcription factor RAX3 OS=Arabidopsis thaliana ... [more]
RAX2_ARATH3.811e-4260.63Transcription factor RAX2 OS=Arabidopsis thaliana ... [more]
MYB3_HORVU1.109e-4162.39Myb-related protein Hv33 OS=Hordeum vulgare GN=MYB... [more]
MYBC_MAIZE1.448e-4161.74Anthocyanin regulatory C1 protein OS=Zea mays GN=C... [more]
MYB46_ARATH1.601e-4068.52Transcription factor MYB46 OS=Arabidopsis thaliana... [more]
GAM1_ORYSJ1.038e-3967.27Transcription factor GAMYB OS=Oryza sativa subsp. ... [more]
GAM1_ORYSI1.038e-3967.27Transcription factor GAMYB OS=Oryza sativa subsp. ... [more]
TT2_ARATH1.147e-3867.62Transcription factor TT2 OS=Arabidopsis thaliana G... [more]
WER_ARATH9.713e-3862.50Transcription factor WER OS=Arabidopsis thaliana G... [more]
MYB23_ARATH2.826e-3761.54Transcription factor MYB23 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-E04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659914 ID=EY659914; Name=EY659914; organism=Citrus sinensis; type=EST; length=926bp
AAGTGGTAGCCTGCAGTACGGNNAGGAATTTTTCATATGGGGGNGTNNGT
AAAAATATTCCTAAACAGGAGGTTAATTAAATTAGAAGATTTCTAGAGGA
ACTCTTACTAGTTTTAACCCGATGGGAAGAGCACCGTGCTGTGATAAAAG
CGGGCTTAAGAAAGGGCCATGGACACCAGAGGAAGATCAGAAGTTGATAG
ATTACATTCAAAAACACGGCTACGGGAATTGGAGAACACTTCCAAAGAAT
GCCGGTTTGCAAAGATGTGGAAAGAGCTGCCGTCTCCGCTGGACTAACTA
TTTGCGACCGGATATCAAGAGAGGCAGATTTGCTTTTGAAGAAGAAGAAA
CAATAATTCAGCTACATAGTATATTGGGGAACAAGTGGTCTGCAATTGCT
GCTCGCTTGCCTGGAAGAACAGACAATGAAATCAAGAACTACTGGAACAC
TCACATTAGAAAAAGGCTTCTTCGTATGGGAATCGATCCAGTTACTCATA
GCCCTCGTCTTGATCTCCTTGATCTATCTTCGATTCTAAGCTCATCTTTT
TACAGTTCATCTCAAATGAACATTTCGAGGCTTGTCGGGGCGCAGACTTT
AGTTAACCCAGAGCTACTAAGATTGGCCACATCTCTTATGTCAACGCATC
ATCACCGCGAAAACCAAAACCAAATCCAAAAATTTATTTATCAAAATTTT
CAAGAAACCAATATCAGCAATTAGTCCAACCTGATAGTCACCAACTTCAG
ATTCCACTTGAAGCTTGCTGCACATTGACTCCTCCTCCCTCCTCTTGTGG
TTCTCATTCTAATGATCAAGCACAACTAATGAACTCTAATGTAGAGGCAT
TCCCAACAATTTCACCAACTTTAGCAACAAAATTGTCAACAAAGTGATGG
GAGAGCATGGGATTGCCTCGAACTGA
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