EY659914

Overview
NameEY659914
Unique NameEY659914
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length926
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY659914_ssr338 microsatellite EY659914_ssr338:338..349. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYB82_ARATH (Transcription factor MYB82 OS=Arabidopsis thaliana GN=MYB82 PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 4.081e-36
Identity = 64/107 (59.81%), Postives = 84/107 (78.50%), Query Frame = 2
Query:  146 KSGLKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKR 466
            KS +K+G W PEED  L  Y++ HG GNW  + + +GL+R GKSCRLRW NYLRP+IKRG  + +E++ II++H +LGN+WS IA RLPGRTDNE+KNYWNTH+ K+
Sbjct:    9 KSYVKRGLWKPEEDMILKSYVETHGEGNWADISRRSGLKRGGKSCRLRWKNYLRPNIKRGSMSPQEQDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKK 115          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: GL1_ARATH (Trichome differentiation protein GL1 OS=Arabidopsis thaliana GN=GL1 PE=1 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 5.330e-36
Identity = 62/105 (59.05%), Postives = 81/105 (77.14%), Query Frame = 2
Query:  158 KKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLL 472
            KKG WT EED  L+DY+  HG G W  + +  GL+RCGKSCRLRW NYL P++ +G F  +EE+ II+LH +LGN+WS IA R+PGRTDN++KNYWNTH+ K+L+
Sbjct:   15 KKGLWTVEEDNILMDYVLNHGTGQWNRIVRKTGLKRCGKSCRLRWMNYLSPNVNKGNFTEQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSKKLV 119          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: GL1_ARALY (Trichome differentiation protein GL1 OS=Arabidopsis lyrata GN=GL1 PE=3 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 5.330e-36
Identity = 62/105 (59.05%), Postives = 81/105 (77.14%), Query Frame = 2
Query:  158 KKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLL 472
            KKG WT EED  L+DY+  HG G W  + +  GL+RCGKSCRLRW NYL P++ +G F  +EE+ II+LH +LGN+WS IA R+PGRTDN++KNYWNTH+ K+L+
Sbjct:   15 KKGLWTVEEDNILMDYVLNHGTGQWNRIVRKTGLKRCGKSCRLRWMNYLSPNVNKGNFTEQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSKKLV 119          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: LAF1_ARATH (Transcription factor LAF1 OS=Arabidopsis thaliana GN=LAF1 PE=1 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 7.696e-35
Identity = 66/106 (62.26%), Postives = 82/106 (77.36%), Query Frame = 2
Query:  158 KKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLR 475
            +KG W+PEED+KL  +I  +G+  W T+P  AGLQR GKSCRLRW NYLRP +KR   + EEEETI+  HS LGNKWS IA  LPGRTDNEIKNYW++H++K+ L+
Sbjct:   11 RKGLWSPEEDEKLRSFILSYGHSCWTTVPIKAGLQRNGKSCRLRWINYLRPGLKRDMISAEEEETILTFHSSLGNKWSQIAKFLPGRTDNEIKNYWHSHLKKKWLK 116          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYB05_ANTMA (Myb-related protein 305 OS=Antirrhinum majus GN=MYB305 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 2.239e-34
Identity = 67/117 (57.26%), Postives = 85/117 (72.65%), Query Frame = 2
Query:  122 MGRAPCCDKS-GLKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRL 469
            M + PC  +   ++KGPWT EED  LI+YI  HG G W +L ++AGL+R GKSCRLRW NYLRPD++RG    EE+  I++LH+  GN+WS IA  LPGRTDNEIKNYW T I+K +
Sbjct:    1 MDKKPCNSQDVEVRKGPWTMEEDLILINYIANHGEGVWNSLARSAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLIMELHAKWGNRWSKIAKTLPGRTDNEIKNYWRTRIQKHM 117          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MY114_ARATH (Transcription factor MYB114 OS=Arabidopsis thaliana GN=MYB114 PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 2.239e-34
Identity = 62/105 (59.05%), Postives = 79/105 (75.24%), Query Frame = 2
Query:  152 GLKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKR 466
            GL+KG WT EED  L   I K+G G W  +P  AGL RC KSCRLRW NYL+P IKRG+F+ +E + +++LH +LGN+WS IA RLPGRT N++KNYWNTH+ K+
Sbjct:    7 GLRKGAWTAEEDSLLRQCIGKYGEGKWHQVPLRAGLNRCRKSCRLRWLNYLKPSIKRGKFSSDEVDLLLRLHKLLGNRWSLIAGRLPGRTANDVKNYWNTHLSKK 111          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYB75_ARATH (Transcription factor MYB75 OS=Arabidopsis thaliana GN=MYB75 PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 8.509e-34
Identity = 61/105 (58.10%), Postives = 78/105 (74.29%), Query Frame = 2
Query:  152 GLKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKR 466
            GL+KG WT EED  L   I K+G G W  +P  AGL RC KSCRLRW NYL+P IKRG+ + +E + +++LH +LGN+WS IA RLPGRT N++KNYWNTH+ K+
Sbjct:    7 GLRKGAWTTEEDSLLRQCINKYGEGKWHQVPVRAGLNRCRKSCRLRWLNYLKPSIKRGKLSSDEVDLLLRLHRLLGNRWSLIAGRLPGRTANDVKNYWNTHLSKK 111          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYB90_ARATH (Transcription factor MYB90 OS=Arabidopsis thaliana GN=MYB90 PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.111e-33
Identity = 62/105 (59.05%), Postives = 78/105 (74.29%), Query Frame = 2
Query:  152 GLKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKR 466
            GL+KG WT EED  L   I K+G G W  +P  AGL RC KSCRLRW NYL+P IKRGR + +E + +++LH +LGN+WS IA RLPGRT N++KNYWNTH+ K+
Sbjct:    7 GLRKGAWTAEEDSLLRLCIDKYGEGKWHQVPLRAGLNRCRKSCRLRWLNYLKPSIKRGRLSNDEVDLLLRLHKLLGNRWSLIAGRLPGRTANDVKNYWNTHLSKK 111          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MY113_ARATH (Transcription factor MYB113 OS=Arabidopsis thaliana GN=MYB113 PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.451e-33
Identity = 63/115 (54.78%), Postives = 80/115 (69.57%), Query Frame = 2
Query:  122 MGRAPCCDKSGLKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKR 466
            MG +P     GL+KG WT EED  L   I K+G G W  +P   GL RC KSCRLRW NYL+P IKRG+   +E + +++LH +LGN+WS IA RLPGRT N++KNYWNTH+ K+
Sbjct:    1 MGESP----KGLRKGTWTTEEDILLRQCIDKYGEGKWHRVPLRTGLNRCRKSCRLRWLNYLKPSIKRGKLCSDEVDLVLRLHKLLGNRWSLIAGRLPGRTANDVKNYWNTHLSKK 111          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYB40_ANTMA (Myb-related protein 340 OS=Antirrhinum majus GN=MYB340 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.896e-33
Identity = 67/118 (56.78%), Postives = 85/118 (72.03%), Query Frame = 2
Query:  122 MGRAPCCDKS-GLKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWN-THIRKRL 469
            M + PC      ++KGPWT EED  LI++I  HG G W T+ ++AGL+R GKSCRLRW NYLRPD++RG    EE+  I++LH+  GN+WS IA  LPGRTDNEIKNYWN T I+K +
Sbjct:    1 MDKKPCNSHDVEVRKGPWTMEEDLILINFISNHGEGVWNTIARSAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNYWNRTRIQKHI 118          
The following BLAST results are available for this feature:
BLAST of EY659914 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 74
Match NameE-valueIdentityDescription
MYB82_ARATH4.081e-3659.81Transcription factor MYB82 OS=Arabidopsis thaliana... [more]
GL1_ARATH5.330e-3659.05Trichome differentiation protein GL1 OS=Arabidopsi... [more]
GL1_ARALY5.330e-3659.05Trichome differentiation protein GL1 OS=Arabidopsi... [more]
LAF1_ARATH7.696e-3562.26Transcription factor LAF1 OS=Arabidopsis thaliana ... [more]
MYB05_ANTMA2.239e-3457.26Myb-related protein 305 OS=Antirrhinum majus GN=MY... [more]
MY114_ARATH2.239e-3459.05Transcription factor MYB114 OS=Arabidopsis thalian... [more]
MYB75_ARATH8.509e-3458.10Transcription factor MYB75 OS=Arabidopsis thaliana... [more]
MYB90_ARATH1.111e-3359.05Transcription factor MYB90 OS=Arabidopsis thaliana... [more]
MY113_ARATH1.451e-3354.78Transcription factor MYB113 OS=Arabidopsis thalian... [more]
MYB40_ANTMA1.896e-3356.78Myb-related protein 340 OS=Antirrhinum majus GN=MY... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-E04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659914 ID=EY659914; Name=EY659914; organism=Citrus sinensis; type=EST; length=926bp
AAGTGGTAGCCTGCAGTACGGNNAGGAATTTTTCATATGGGGGNGTNNGT
AAAAATATTCCTAAACAGGAGGTTAATTAAATTAGAAGATTTCTAGAGGA
ACTCTTACTAGTTTTAACCCGATGGGAAGAGCACCGTGCTGTGATAAAAG
CGGGCTTAAGAAAGGGCCATGGACACCAGAGGAAGATCAGAAGTTGATAG
ATTACATTCAAAAACACGGCTACGGGAATTGGAGAACACTTCCAAAGAAT
GCCGGTTTGCAAAGATGTGGAAAGAGCTGCCGTCTCCGCTGGACTAACTA
TTTGCGACCGGATATCAAGAGAGGCAGATTTGCTTTTGAAGAAGAAGAAA
CAATAATTCAGCTACATAGTATATTGGGGAACAAGTGGTCTGCAATTGCT
GCTCGCTTGCCTGGAAGAACAGACAATGAAATCAAGAACTACTGGAACAC
TCACATTAGAAAAAGGCTTCTTCGTATGGGAATCGATCCAGTTACTCATA
GCCCTCGTCTTGATCTCCTTGATCTATCTTCGATTCTAAGCTCATCTTTT
TACAGTTCATCTCAAATGAACATTTCGAGGCTTGTCGGGGCGCAGACTTT
AGTTAACCCAGAGCTACTAAGATTGGCCACATCTCTTATGTCAACGCATC
ATCACCGCGAAAACCAAAACCAAATCCAAAAATTTATTTATCAAAATTTT
CAAGAAACCAATATCAGCAATTAGTCCAACCTGATAGTCACCAACTTCAG
ATTCCACTTGAAGCTTGCTGCACATTGACTCCTCCTCCCTCCTCTTGTGG
TTCTCATTCTAATGATCAAGCACAACTAATGAACTCTAATGTAGAGGCAT
TCCCAACAATTTCACCAACTTTAGCAACAAAATTGTCAACAAAGTGATGG
GAGAGCATGGGATTGCCTCGAACTGA
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