EY659914

Overview
NameEY659914
Unique NameEY659914
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length926
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY659914_ssr338 microsatellite EY659914_ssr338:338..349. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYB98_ARATH (Transcription factor MYB98 OS=Arabidopsis thaliana GN=MYB98 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.982e-24
Identity = 52/107 (48.60%), Postives = 71/107 (66.36%), Query Frame = 2
Query:  146 KSGLKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKR 466
            KS L KG WT EED+ LI  ++K+G   W  + +     R GK CR RW N+LRPDIK+  ++ EE+  +I+ H  +GNKW+ IA RLPGRT+N IKN+WN   R++
Sbjct:  212 KSTLVKGQWTAEEDRVLIQLVEKYGLRKWSHIAQVLP-GRIGKQCRERWHNHLRPDIKKETWSEEEDRVLIEFHKEIGNKWAEIAKRLPGRTENSIKNHWNATKRRQ 317          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MB3R1_ARATH (Myb-related protein 3R-1 OS=Arabidopsis thaliana GN=MYB3R-1 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.043e-23
Identity = 49/105 (46.67%), Postives = 70/105 (66.67%), Query Frame = 2
Query:  155 LKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRL 469
            L KGPW+ EED  +ID ++K+G   W T+ ++    R GK CR RW N+L P I +  +  EEE T+I+ H I GNKW+ +   LPGR+DN IKN+WN+ ++K+L
Sbjct:   85 LVKGPWSKEEDNTIIDLVEKYGPKKWSTISQHLP-GRIGKQCRERWHNHLNPGINKNAWTQEEELTLIRAHQIYGNKWAELMKFLPGRSDNSIKNHWNSSVKKKL 188          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYB44_ARATH (Transcription factor MYB44 OS=Arabidopsis thaliana GN=MYB44 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.362e-23
Identity = 49/102 (48.04%), Postives = 70/102 (68.63%), Query Frame = 2
Query:  161 KGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKR 466
            KGPW+PEED++L   + K+G  NW  + K+    R GKSCRLRW N L P ++   F+ EE+ETI + H+  GNKW+ IA  L GRTDN +KN+WN+ ++++
Sbjct:    6 KGPWSPEEDEQLRRLVVKYGPRNWTVISKSIP-GRSGKSCRLRWCNQLSPQVEHRPFSAEEDETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRK 106          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYB_DROME (Myb protein OS=Drosophila melanogaster GN=Myb PE=1 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 2.174e-21
Identity = 48/104 (46.15%), Postives = 67/104 (64.42%), Query Frame = 2
Query:  155 LKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKR 466
            L KGPWT +ED  +I  ++  G   W  + +     R GK CR RW N+L P+IK+  +  +E+E I Q H  LGN+W+ IA RLPGRTDN IKN+WN+ +R++
Sbjct:  134 LIKGPWTRDEDDMVIKLVRNFGPKKWTLIARYLN-GRIGKQCRERWHNHLNPNIKKTAWTEKEDEIIYQAHLELGNQWAKIAKRLPGRTDNAIKNHWNSTMRRK 236          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYBAA_DICDI (Myb-like protein AA OS=Dictyostelium discoideum GN=mybAA PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.261e-21
Identity = 53/134 (39.55%), Postives = 74/134 (55.22%), Query Frame = 2
Query:  128 RAPCCDKSGLKK--------------GPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMGID 487
            ++P   KSGLKK              G WT EED+KL   +  HG   W+ +     L R G+ CR RW+N L P IKR  +  EE+  I+  HS  GNKW+ I+  LPGRT+  IKN+WN+ ++++L +   D
Sbjct:  732 KSPAVKKSGLKKSGRSKSSSNESKAKGHWTKEEDEKLRSLVDLHGTKRWKYIASLLCL-RNGRQCRERWSNQLDPSIKRDAWTLEEDRIILDAHSKYGNKWAEISKLLPGRTNCAIKNHWNSTMKRKLSKKQYD 864          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYBQ_DICDI (Myb-like protein Q OS=Dictyostelium discoideum GN=mybQ PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.403e-20
Identity = 45/106 (42.45%), Postives = 67/106 (63.21%), Query Frame = 2
Query:  152 GLKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRL 469
            G+ KGPW  EED KL++ + K G   W ++       R GK CR RW N+L P++++  +  EE++ II  H+ LGNKW+AI+  L GR  N IKN+WN+ + K++
Sbjct:  274 GIVKGPWKDEEDAKLVELVNKCGPKEWSSIAAKIP-GRIGKQCRERWFNHLSPEVRKTNWTPEEDKIIIDAHASLGNKWTAISKMLDGRPANAIKNHWNSTLLKKI 378          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYBA_DICDI (Myb-like protein A OS=Dictyostelium discoideum GN=mybA PE=4 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 2.403e-20
Identity = 46/103 (44.66%), Postives = 68/103 (66.02%), Query Frame = 2
Query:  155 LKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRK 463
            L KG WT +ED K+I+ ++ +G   W  +  +    R GK CR RW N+L P+IK+  ++ EE++ I   H+I GNKW+ IA  LPGRTDN IKN+WN+ +++
Sbjct:  199 LVKGAWTKDEDDKVIELVKTYGPKKWSDIALHLK-GRMGKQCRERWHNHLNPNIKKEAWSDEEDQIIRDQHAIHGNKWAEIAKFLPGRTDNAIKNHWNSSMKR 300          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: RS2_MAIZE (Protein rough sheath 2 OS=Zea mays GN=RS2 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.237e-17
Identity = 42/101 (41.58%), Postives = 57/101 (56.44%), Query Frame = 2
Query:  170 WTPEEDQKLIDYIQKHGYGNWRTLPK--NAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKR 466
            W PEED  L  Y++++G   W  + +  N  L R  KSC  RW NYLRP IK+G    EE+  +I+L +  GNKW  IAA +PGRT   +  +W     K+
Sbjct:    7 WRPEEDAVLRAYVRQYGPREWHLVSQRMNVALDRDAKSCLERWKNYLRPGIKKGSLTEEEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQ 107          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: RS2_ORYSJ (Protein rough sheath 2 homolog OS=Oryza sativa subsp. japonica GN=RS2 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.612e-16
Identity = 41/101 (40.59%), Postives = 58/101 (57.43%), Query Frame = 2
Query:  170 WTPEEDQKLIDYIQKHGYGNWRTLPK--NAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKR 466
            W PEED  L+ Y++++G   W  + +  N  L R  KSC  RW NYLRP IK+G    +E+  +I+L +  GNKW  IAA +PGRT   +  +W     K+
Sbjct:   12 WRPEEDAILLAYVRQYGPREWSLVSQRMNRPLHRDAKSCLERWKNYLRPGIKKGSLTDDEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQ 112          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYB1_NEUCR (Myb-like DNA-binding protein myb-1 OS=Neurospora crassa GN=rca-1 PE=3 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 1.045e-15
Identity = 39/97 (40.21%), Postives = 57/97 (58.76%), Query Frame = 2
Query:  158 KKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWN 448
            ++GPW+  EDQ+LI  ++  G GNW  + +  G  R  K CR RW   L+P +  G    EE   I++   + G +W+ IA +L GR+DN +KNYWN
Sbjct:    8 RRGPWSAGEDQRLIKLVKDLGPGNWVNVARILGT-RTPKQCRERWHQNLKPGLNHGPMTQEEAAIIVREVDLKGPRWADIARKLQGRSDNAVKNYWN 103          
The following BLAST results are available for this feature:
BLAST of EY659914 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 74
Match NameE-valueIdentityDescription
MYB98_ARATH7.982e-2448.60Transcription factor MYB98 OS=Arabidopsis thaliana... [more]
MB3R1_ARATH1.043e-2346.67Myb-related protein 3R-1 OS=Arabidopsis thaliana G... [more]
MYB44_ARATH1.362e-2348.04Transcription factor MYB44 OS=Arabidopsis thaliana... [more]
MYB_DROME2.174e-2146.15Myb protein OS=Drosophila melanogaster GN=Myb PE=1... [more]
MYBAA_DICDI8.261e-2139.55Myb-like protein AA OS=Dictyostelium discoideum GN... [more]
MYBQ_DICDI2.403e-2042.45Myb-like protein Q OS=Dictyostelium discoideum GN=... [more]
MYBA_DICDI2.403e-2044.66Myb-like protein A OS=Dictyostelium discoideum GN=... [more]
RS2_MAIZE7.237e-1741.58Protein rough sheath 2 OS=Zea mays GN=RS2 PE=1 SV=... [more]
RS2_ORYSJ1.612e-1640.59Protein rough sheath 2 homolog OS=Oryza sativa sub... [more]
MYB1_NEUCR1.045e-1540.21Myb-like DNA-binding protein myb-1 OS=Neurospora c... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-E04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659914 ID=EY659914; Name=EY659914; organism=Citrus sinensis; type=EST; length=926bp
AAGTGGTAGCCTGCAGTACGGNNAGGAATTTTTCATATGGGGGNGTNNGT
AAAAATATTCCTAAACAGGAGGTTAATTAAATTAGAAGATTTCTAGAGGA
ACTCTTACTAGTTTTAACCCGATGGGAAGAGCACCGTGCTGTGATAAAAG
CGGGCTTAAGAAAGGGCCATGGACACCAGAGGAAGATCAGAAGTTGATAG
ATTACATTCAAAAACACGGCTACGGGAATTGGAGAACACTTCCAAAGAAT
GCCGGTTTGCAAAGATGTGGAAAGAGCTGCCGTCTCCGCTGGACTAACTA
TTTGCGACCGGATATCAAGAGAGGCAGATTTGCTTTTGAAGAAGAAGAAA
CAATAATTCAGCTACATAGTATATTGGGGAACAAGTGGTCTGCAATTGCT
GCTCGCTTGCCTGGAAGAACAGACAATGAAATCAAGAACTACTGGAACAC
TCACATTAGAAAAAGGCTTCTTCGTATGGGAATCGATCCAGTTACTCATA
GCCCTCGTCTTGATCTCCTTGATCTATCTTCGATTCTAAGCTCATCTTTT
TACAGTTCATCTCAAATGAACATTTCGAGGCTTGTCGGGGCGCAGACTTT
AGTTAACCCAGAGCTACTAAGATTGGCCACATCTCTTATGTCAACGCATC
ATCACCGCGAAAACCAAAACCAAATCCAAAAATTTATTTATCAAAATTTT
CAAGAAACCAATATCAGCAATTAGTCCAACCTGATAGTCACCAACTTCAG
ATTCCACTTGAAGCTTGCTGCACATTGACTCCTCCTCCCTCCTCTTGTGG
TTCTCATTCTAATGATCAAGCACAACTAATGAACTCTAATGTAGAGGCAT
TCCCAACAATTTCACCAACTTTAGCAACAAAATTGTCAACAAAGTGATGG
GAGAGCATGGGATTGCCTCGAACTGA
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