EY659903
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659903 vs. ExPASy Swiss-Prot
Match: PEL18_SOLLC (Probable pectate lyase P18 OS=Solanum lycopersicum GN=9612 PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 2.225e-34 Identity = 69/120 (57.50%), Postives = 80/120 (66.67%), Query Frame = 2 Query: 44 RHGYFHVVNNDYTHWDTYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYF--TPXXXXXXXXXXXXXXXXXKSSSMAGSITSGAGALTCRKSRQC 397 RHGYFHVVNNDYTHW+ YAIGGSA PTINSQGNR+ AP + KEVTK D SQW+ WNWRSEGDL+LNGAYF T + SS+ GSIT+ AG + C+K +C Sbjct: 285 RHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFLAPNEKYRKEVTKHEDAPESQWRSWNWRSEGDLMLNGAYFRQTGAGASSSSTYARASSLSARPSSLVGSITTNAGPVNCKKGSRC 404
BLAST of EY659903 vs. ExPASy Swiss-Prot
Match: PEL_ZINEL (Pectate lyase OS=Zinnia elegans PE=1 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.957e-34 Identity = 67/118 (56.78%), Postives = 78/118 (66.10%), Query Frame = 2 Query: 44 RHGYFHVVNNDYTHWDTYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXXKSSSMAGSITSGAGALTCRKSRQC 397 RHGYFHVVNNDYTHW+ YAIGGSA+PTI SQGNR+ AP F KEVTK + S+WK WNWRSEGDL+LNGAYF + S++ S+T AGAL CRK +C Sbjct: 284 RHGYFHVVNNDYTHWEMYAIGGSASPTIYSQGNRFLAPNTRFDKEVTKHENAPESEWKNWNWRSEGDLMLNGAYFRESGGRAASSFARASSLSGRPSTLVASMTRSAGALVCRKGSRC 401
BLAST of EY659903 vs. ExPASy Swiss-Prot
Match: PEL22_ARATH (Probable pectate lyase 22 OS=Arabidopsis thaliana GN=At5g63180 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 4.196e-33 Identity = 67/120 (55.83%), Postives = 80/120 (66.67%), Query Frame = 2 Query: 44 RHGYFHVVNNDYTHWDTYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFT--PXXXXXXXXXXXXXXXXXKSSSMAGSITSGAGALTCRKSRQC 397 RHGYFHVVNNDYTHW+ YAIGGSANPTINSQGNR+ AP ++ +KEVTK D +W+ WNWRSEGDLLLNGA+FT + SS G IT +GAL+C++ C Sbjct: 313 RHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPDDSSSKEVTKHEDAPEDEWRNWNWRSEGDLLLNGAFFTYSGAGPAKSSSYSKASSLAARPSSHVGEITIASGALSCKRGSHC 432
BLAST of EY659903 vs. ExPASy Swiss-Prot
Match: PEL12_ARATH (Probable pectate lyase 12 OS=Arabidopsis thaliana GN=At3g53190 PE=2 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 1.763e-31 Identity = 64/110 (58.18%), Postives = 72/110 (65.45%), Query Frame = 2 Query: 44 RHGYFHVVNNDYTHWDTYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXXKSSSMAGSITSGAGAL 373 R GY HVVNND+T W+ YAIGGS NPTINSQGNRY AP N FAKEVTKRV+T WKGWNWRSEGD+L+NGA+F KS+S IT +G L Sbjct: 305 RRGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPTNPFAKEVTKRVETPDGDWKGWNWRSEGDILVNGAFFVASGEGAEMRYEKAYSVEPKSASFITQITFHSGVL 414
BLAST of EY659903 vs. ExPASy Swiss-Prot
Match: PEL13_ARATH (Probable pectate lyase 13 OS=Arabidopsis thaliana GN=PMR6 PE=1 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.708e-26 Identity = 57/109 (52.29%), Postives = 69/109 (63.30%), Query Frame = 2 Query: 44 RHGYFHVVNNDYTHWDTYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTA-ASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXXKSSSMAGSITSGAG 367 R GY HVVNND+T W YAIGGS NPTINSQGNRY+AP + AKEVTKRVD+ +W WNWR+EGDL+ NGA+F K++S+ +T AG Sbjct: 302 RRGYIHVVNNDFTEWKMYAIGGSGNPTINSQGNRYSAPSDPSAKEVTKRVDSKDDGEWSNWNWRTEGDLMENGAFFVASGEGMSSMYSKASSVDPKAASLVDQLTRNAG 410
BLAST of EY659903 vs. ExPASy Swiss-Prot
Match: PEL3_ARATH (Probable pectate lyase 3 OS=Arabidopsis thaliana GN=AT59 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.446e-25 Identity = 58/124 (46.77%), Postives = 69/124 (55.65%), Query Frame = 2 Query: 44 RHGYFHVVNNDYTHWDTYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYF------TPXXXXXXXXXXXXXXXXXKSSSMAGSITSGAGALTCRKSRQC 397 R+G HVVNNDYTHW+ YAIGG+ NPTI SQGNR+ AP N AK++TKR T +WK WNW+SEGD LNGAYF K +M +T AG L C+ C Sbjct: 336 RYGTIHVVNNDYTHWEMYAIGGNMNPTIISQGNRFIAPPNEEAKQITKREYTPYGEWKSWNWQSEGDYFLNGAYFVQSGKANAWSSKPKTPLPNKFTIRPKPGTMVRKLTMDAGVLGCKLGEAC 459
BLAST of EY659903 vs. ExPASy Swiss-Prot
Match: PEL21_ARATH (Putative pectate lyase 21 OS=Arabidopsis thaliana GN=At5g55720 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.726e-24 Identity = 55/119 (46.22%), Postives = 68/119 (57.14%), Query Frame = 2 Query: 44 RHGYFHVVNNDYTHWDTYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDT-AASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXXKSSSMAGSITSGAGALTCRKSRQC 397 RHGYFH+VNN Y W YAIGGSANPTI SQGN + A N F KEVTKR +WK WNW+SEGD ++NGA+FTP + +S+ + G L+C + C Sbjct: 274 RHGYFHIVNNIYRDWKMYAIGGSANPTIFSQGNVFIASNNQFTKEVTKRESADGDEEWKEWNWKSEGDEMVNGAFFTPSGKEDSPSYAKFSSMVARPASLLKTTHPSVGVLSCEIDQAC 392
BLAST of EY659903 vs. ExPASy Swiss-Prot
Match: PEL_LILLO (Pectate lyase OS=Lilium longiflorum PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.561e-24 Identity = 52/118 (44.07%), Postives = 70/118 (59.32%), Query Frame = 2 Query: 44 RHGYFHVVNNDYTHWDTYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXXKSSSMAGSITSGAGALTCRKSRQC 397 R+G+ HVVNNDYTHW YA+GGS +PTI SQGNRY AP AKEVTKR ++W W W+S+GDL ++GA+F K + +T +GAL C+++ +C Sbjct: 317 RYGFVHVVNNDYTHWIMYAVGGSQHPTIISQGNRYIAPHIEAAKEVTKRDYAEPAEWSKWTWKSQGDLFVSGAFFVESGGPFENKYSKKDLIKAKPGTFVQRLTRFSGALNCKENMEC 434
BLAST of EY659903 vs. ExPASy Swiss-Prot
Match: PEL59_SOLLC (Probable pectate lyase P59 OS=Solanum lycopersicum GN=LAT59 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.937e-23 Identity = 49/76 (64.47%), Postives = 56/76 (73.68%), Query Frame = 2 Query: 44 RHGYFHVVNNDYTHWDTYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFT 271 R GY HVVNNDYTHW+ YAIGGS +PTI QGNR+ AP + F K+VTKR S W W WRSEG+L +NGAYFT Sbjct: 330 RWGYIHVVNNDYTHWNMYAIGGSMHPTIIHQGNRFIAPPDIFKKQVTKREYNPESVWMQWTWRSEGNLFMNGAYFT 405
BLAST of EY659903 vs. ExPASy Swiss-Prot
Match: PEL7_ARATH (Probable pectate lyase 7 OS=Arabidopsis thaliana GN=At3g01270 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 5.142e-23 Identity = 57/120 (47.50%), Postives = 69/120 (57.50%), Query Frame = 2 Query: 44 RHGYFHVVNNDYTHWDTYAIGGSANPTINSQGNRYNAPLN-AFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXXKSSSMAGS-ITSGAGALTCRKSRQC 397 R G+ HVVNNDYTHW+ YAIGGS PTI S GNR+ AP + +EVTKR + S+WK WNWRSE D+ +N AYF + MA S +T AGAL CR + C Sbjct: 356 RWGFVHVVNNDYTHWELYAIGGSQGPTILSHGNRFIAPPHKQHYREVTKRDYASESEWKNWNWRSEKDVFMNNAYFRQSGNPHFKCSHSRQQMIKPKNGMAVSKLTKYAGALDCRVGKAC 475 The following BLAST results are available for this feature:
BLAST of EY659903 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659903 ID=EY659903; Name=EY659903; organism=Citrus sinensis; type=EST; length=916bpback to top |