EY659896

Overview
NameEY659896
Unique NameEY659896
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: FOLKE_LACLA (Bifunctional protein folKE OS=Lactococcus lactis subsp. lactis GN=folKE PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.846e-12
Identity = 46/135 (34.07%), Postives = 70/135 (51.85%), Query Frame = 3
Query:  396 ENGVKLSSLELGFEQEPDALAIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELL 800
            E  V    L +  E++     IEDAVK +L  +GE+ NREG+ +TP RVAK   E     +Q +    E  LF                 +V+++D+  +S C+  +LPF  K HV Y+P+  +++GLSK P L+
Sbjct:  148 ELSVSEQELHVIKEEKTPRNRIEDAVKEILFAVGENPNREGLLETPARVAKMYEEILS--SQRLSKFNEYKLFE--------IDSSKTDSIVLIKDIPFYSMCEHHMLPFFGKAHVAYIPADGKIIGLSKIPRLV 272          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_GEOSW (GTP cyclohydrolase 1 OS=Geobacillus sp. (strain WCH70) GN=folE PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.023e-12
Identity = 47/131 (35.88%), Postives = 71/131 (54.20%), Query Frame = 3
Query:  459 IEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEV 848
            IE AV+++L+ +GED NREG+  TP RVAK   E   G  ++ K   +  +F E   +           LV+V+D+  +S C+  L+PF    HV Y+P G +V GLSK    +++    P+ Q R+T  V
Sbjct:    9 IEYAVRLILEAIGEDPNREGLVDTPKRVAKMYAEVFAGLHEDPKQHFQ-TVFSEDHEE-----------LVLVKDIPFYSMCEHHLVPFFGVAHVAYIPRGGKVTGLSKLARAVETVARRPQLQERITATV 127          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_WOLSU (GTP cyclohydrolase 1 OS=Wolinella succinogenes GN=folE PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.568e-12
Identity = 38/123 (30.89%), Postives = 73/123 (59.35%), Query Frame = 3
Query:  441 EPDALAIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSF 809
            E   +A+E+ ++ +   +G+D +REG+  TP RV K+  +   GYTQ+ ++I+ G +F +   D           +V++++++ +S C+  +LPF  KV + Y+P  Q+V+G+SK   L++ F
Sbjct:    2 EDKKIAMEETIRSIFDFIGDDRHREGLLDTPKRVVKSWDKLYSGYTQDPREIL-GTVFEDGACD----------EMVVLKNIEFYSMCEHHMLPFFGKVSIGYIPD-QKVVGISKLARLVEVF 112          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_STRSY (GTP cyclohydrolase 1 OS=Streptococcus suis (strain 05ZYH33) GN=folE PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.568e-12
Identity = 50/131 (38.17%), Postives = 68/131 (51.91%), Query Frame = 3
Query:  459 IEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEV 848
            IE  +  LL+ LGED NREG+  TP RVAK   E   G  ++ KD    A+F E   +           +V+V+D+   S C+  L+PF    HV Y+PS  RV GLSK    ++     P+ Q RLT +V
Sbjct:    7 IEQTIYQLLELLGEDPNREGLLDTPKRVAKMYLEMFNGLEEDPKDQFT-AVFSEGHEE-----------VVLVKDIPFHSMCEHHLVPFYGIAHVAYIPSKGRVTGLSKLARAVEVASRRPQLQERLTHQV 125          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_STRS2 (GTP cyclohydrolase 1 OS=Streptococcus suis (strain 98HAH33) GN=folE PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.568e-12
Identity = 50/131 (38.17%), Postives = 68/131 (51.91%), Query Frame = 3
Query:  459 IEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEV 848
            IE  +  LL+ LGED NREG+  TP RVAK   E   G  ++ KD    A+F E   +           +V+V+D+   S C+  L+PF    HV Y+PS  RV GLSK    ++     P+ Q RLT +V
Sbjct:    7 IEQTIYQLLELLGEDPNREGLLDTPKRVAKMYLEMFNGLEEDPKDQFT-AVFSEGHEE-----------VVLVKDIPFHSMCEHHLVPFYGIAHVAYIPSKGRVTGLSKLARAVEVASRRPQLQERLTHQV 125          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_STRP8 (GTP cyclohydrolase 1 OS=Streptococcus pyogenes serotype M18 GN=folE PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.568e-12
Identity = 47/130 (36.15%), Postives = 69/130 (53.08%), Query Frame = 3
Query:  462 EDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEV 848
            E A+   L+ +GE+ NREG+  TP RVAK   E   G  ++ K+    A+F E   D           +VIV+D+  +S C+  L+PF  K H+ Y+PS  RV GLSK    ++     P+ Q RLT ++
Sbjct:   15 EAAIYQFLEAIGENPNREGLLDTPKRVAKMYAEMFLGLGKDPKEEFT-AVFKEQHED-----------VVIVKDISFYSICEHHLVPFYGKAHIAYLPSDGRVTGLSKLARAVEVASKRPQLQERLTSQI 132          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_STRP6 (GTP cyclohydrolase 1 OS=Streptococcus pyogenes serotype M6 GN=folE PE=3 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 8.568e-12
Identity = 47/130 (36.15%), Postives = 69/130 (53.08%), Query Frame = 3
Query:  462 EDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEV 848
            E A+   L+ +GE+ NREG+  TP RVAK   E   G  ++ K+    A+F E   D           +VIV+D+  +S C+  L+PF  K H+ Y+PS  RV GLSK    ++     P+ Q RLT ++
Sbjct:   15 EAAIYQFLEAIGENPNREGLLDTPKRVAKMYAEMFLGLGKDPKEEFT-AVFKEQHED-----------VVIVKDISFYSICEHHLVPFYGKAHIAYLPSDGRVTGLSKLARAVEVASKRPQLQERLTSQI 132          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_STRP1 (GTP cyclohydrolase 1 OS=Streptococcus pyogenes serotype M1 GN=folE PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.568e-12
Identity = 47/130 (36.15%), Postives = 69/130 (53.08%), Query Frame = 3
Query:  462 EDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEV 848
            E A+   L+ +GE+ NREG+  TP RVAK   E   G  ++ K+    A+F E   D           +VIV+D+  +S C+  L+PF  K H+ Y+PS  RV GLSK    ++     P+ Q RLT ++
Sbjct:   15 EAAIYQFLEAIGENPNREGLLDTPKRVAKMYAEMFLGLGKDPKEEFT-AVFKEQHED-----------VVIVKDISFYSICEHHLVPFYGKAHIAYLPSDGRVTGLSKLARAVEVASKRPQLQERLTSQI 132          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_RHOPT (GTP cyclohydrolase 1 OS=Rhodopseudomonas palustris (strain TIE-1) GN=folE PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.568e-12
Identity = 44/125 (35.20%), Postives = 64/125 (51.20%), Query Frame = 3
Query:  435 EQEPDALAIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSF 809
            +  P     E AVK LL  +GE+  REG+  TP RV +A  E  +GY Q  K+++E      A  D            V+VR++   S+C+  ++PF  K H+ Y P  +RV+GLSK   L+  F
Sbjct:   39 QPRPSRAEAEAAVKTLLSYIGENTEREGLIDTPRRVVEAYDELFQGYHQCPKEVLERTFGETAGYD----------DFVLVRNISFTSHCEHHVMPFYGKAHIAYTPV-ERVVGLSKLARLVDIF 152          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_RHOPA (GTP cyclohydrolase 1 OS=Rhodopseudomonas palustris GN=folE PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.568e-12
Identity = 44/125 (35.20%), Postives = 64/125 (51.20%), Query Frame = 3
Query:  435 EQEPDALAIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSF 809
            +  P     E AVK LL  +GE+  REG+  TP RV +A  E  +GY Q  K+++E      A  D            V+VR++   S+C+  ++PF  K H+ Y P  +RV+GLSK   L+  F
Sbjct:   39 QPRPSRAEAEAAVKTLLSYIGENTEREGLIDTPRRVVEAYDELFQGYHQCPKEVLERTFGETAGYD----------DFVLVRNISFTSHCEHHVMPFYGKAHIAYTPV-ERVVGLSKLARLVDIF 152          
The following BLAST results are available for this feature:
BLAST of EY659896 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 175
Match NameE-valueIdentityDescription
FOLKE_LACLA3.846e-1234.07Bifunctional protein folKE OS=Lactococcus lactis s... [more]
GCH1_GEOSW5.023e-1235.88GTP cyclohydrolase 1 OS=Geobacillus sp. (strain WC... [more]
GCH1_WOLSU8.568e-1230.89GTP cyclohydrolase 1 OS=Wolinella succinogenes GN=... [more]
GCH1_STRSY8.568e-1238.17GTP cyclohydrolase 1 OS=Streptococcus suis (strain... [more]
GCH1_STRS28.568e-1238.17GTP cyclohydrolase 1 OS=Streptococcus suis (strain... [more]
GCH1_STRP88.568e-1236.15GTP cyclohydrolase 1 OS=Streptococcus pyogenes ser... [more]
GCH1_STRP68.568e-1236.15GTP cyclohydrolase 1 OS=Streptococcus pyogenes ser... [more]
GCH1_STRP18.568e-1236.15GTP cyclohydrolase 1 OS=Streptococcus pyogenes ser... [more]
GCH1_RHOPT8.568e-1235.20GTP cyclohydrolase 1 OS=Rhodopseudomonas palustris... [more]
GCH1_RHOPA8.568e-1235.20GTP cyclohydrolase 1 OS=Rhodopseudomonas palustris... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-C09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659896 ID=EY659896; Name=EY659896; organism=Citrus sinensis; type=EST; length=885bp
TCAAACAACGCCGCGTCCGAATAATCATTCCCAAAAAACGTATCCTCTTT
CTTTTCCCTTACCCTCTCCCTCTACTGCTTCTGCTCCCTATCTCTTCACA
TCTCTCTTCTTCTCGCTGTTCTTATTGTCTCTGGCTACCTCTTCTTTTCT
TTTTTCCTCTCTCTCCCCTTTTTTTCTTAATTGACAGTTTTACAAAAAAT
TGATTTTTTATTTTTGTGTGTTCCAGAACCAATCTCTTTTCGAGTTTCCA
ATATCAATATCAATATCAATATCAAAGTTGTTTTGTGTGTACTTTTTTGG
GTTTTTGATTGGTTTGTTTATCTGGGTTGTTGTTATTTTGTGTGTCTCTC
AATCAAATGGGCGCTTTGGATGAGGGACATTTCGATTTGGAGCTTGAGAA
TGGAGTGAAACTGAGTAGCCTTGAGCTTGGCTTTGAGCAAGAACCAGACG
CGCTCGCTATTGAGGATGCCGTCAAAGTTCTCTTGCAAGGATTAGGTGAA
GATATTAATAGAGAAGGCATCAAGAAGACTCCTCATCGCGTTGCCAAAGC
TCTTCGTGAAGGAACCAAAGGTTACACACAAAATGTAAAAGACATTGTTG
AAGGTGCTTTGTTCCCTGAAGCANGTGTGGATCATGGAATTGGTCATGCC
GGAGGAGCAGGTGGGCTTGTGATTGTTCGAGATCTTGACCTCTTCTCATA
CTGCCAGTCTTGTTTGCTTCCTTTTCAGGTTAAAGTTCATGTANGCTATG
TGCCATCTGGTCAACGAGTTTTGGGATTAAGCAAGTCTCCAGAGTTGCTG
AAGTCTTTTCAAACGACTCCAAAACCACAGCGTCTAACAGATGAAGTGTG
TCAGCTTTGCACATGGTATCAGCCGGGCAGTGTTG
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