EY659896

Overview
NameEY659896
Unique NameEY659896
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_PELUB (GTP cyclohydrolase 1 OS=Pelagibacter ubique GN=folE PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.568e-12
Identity = 44/132 (33.33%), Postives = 73/132 (55.30%), Query Frame = 3
Query:  462 EDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEVCQ 854
            E+A K +L  +GED +REG+ +TP RV KA +E   GYT++ + I+E         D           +V+ +++ + S+C+  + P     HV Y+P+ +RV+GLSK   +++ F    + Q RLT +V Q
Sbjct:   23 EEAFKTILTWMGEDPSREGLLETPKRVVKAFKEYFGGYTEDAEKILEKTFGDVEGYD----------DMVVEKNISVSSHCEHHMAPIVGTAHVAYIPN-ERVVGLSKLARVVEVFSKRLQTQERLTMQVAQ 143          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_BARHE (GTP cyclohydrolase 1 OS=Bartonella henselae GN=folE PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.568e-12
Identity = 42/128 (32.81%), Postives = 70/128 (54.69%), Query Frame = 3
Query:  426 LGFEQEPDALAIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSF 809
            L   + P    +E A++  L  +GE+ NREG+  TP RVAKA R+   GY ++V++I+ G +F E                VI++DL  +S+C+  ++P   K H+ Y P  ++++GLSK   ++  F
Sbjct:   13 LSGRKRPPFEEVEAAIRTFLLWIGENPNREGLLDTPGRVAKAYRDLFTGYDESVEEIL-GTVFEEV---------SGYNEPVIMKDLSFYSHCEHHMIPIVGKAHIAYFPD-EKIVGLSKIARVVNVF 129          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_XANC5 (GTP cyclohydrolase 1 OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=folE PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.119e-11
Identity = 43/132 (32.58%), Postives = 73/132 (55.30%), Query Frame = 3
Query:  462 EDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEVCQ 854
            E+AV+ LL+  GED  REG+  TP RVA+A  +   GY +  ++ +E      A  D           L+++RD+   S+C+  + P   KVHV Y+P G +V+G+SK   +++S+    + Q ++T ++ Q
Sbjct:   17 EEAVRTLLRWAGEDPTREGLLDTPRRVAEAYGDWFSGYREEPREYLERTFEEVAGYD----------ELIVLRDISYESHCEHHMAPIIGKVHVGYLPRG-KVVGISKLARVVESYARRFQVQEKMTAQIAQ 137          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_STRPG (GTP cyclohydrolase 1 OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=folE PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.119e-11
Identity = 47/130 (36.15%), Postives = 69/130 (53.08%), Query Frame = 3
Query:  462 EDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEV 848
            E A+   L+ +GE+ NREG+  TP RVAK   E   G  ++ K+    A+F E   D           +VIV+D+  +S C+  L+PF  K H+ Y+PS  RV GLSK    ++     P+ Q RLT ++
Sbjct:   15 EAAIYQFLEAIGENPNREGLLDTPKRVAKMYAEMFLGLGKDPKEEFT-AVFKEHHED-----------VVIVKDISFYSICEHHLVPFYGKAHIAYLPSDGRVTGLSKLARAVEVASKRPQLQERLTSQI 132          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_STRP3 (GTP cyclohydrolase 1 OS=Streptococcus pyogenes serotype M3 GN=folE PE=3 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.119e-11
Identity = 47/130 (36.15%), Postives = 69/130 (53.08%), Query Frame = 3
Query:  462 EDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEV 848
            E A+   L+ +GE+ NREG+  TP RVAK   E   G  ++ K+    A+F E   D           +VIV+D+  +S C+  L+PF  K H+ Y+PS  RV GLSK    ++     P+ Q RLT ++
Sbjct:   15 EAAIYQFLEAIGENPNREGLLDTPKRVAKMYAEMFLGLGKDPKEEFT-AVFKEHHED-----------VVIVKDISFYSVCEHHLVPFYGKAHIAYLPSDGRVTGLSKLARAVEVASKRPQLQERLTSQI 132          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_RHOPS (GTP cyclohydrolase 1 OS=Rhodopseudomonas palustris (strain BisB5) GN=folE PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.119e-11
Identity = 43/125 (34.40%), Postives = 64/125 (51.20%), Query Frame = 3
Query:  435 EQEPDALAIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSF 809
            +  P     E AVK LL  +GE+  REG+  TP RV +A  E  +GY Q   ++++      A  D            V+VRD+   S+C+  ++PF  K H+ Y P  +RV+GLSK   L++ F
Sbjct:   39 QPRPSRTEAEQAVKTLLAYIGENTGREGLLDTPRRVVEAYDELFQGYHQCPAEVLDRTFGETAGYD----------DFVLVRDIGFTSHCEHHVMPFYGKAHIAYTPV-ERVVGLSKLARLVEIF 152          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_RHOP2 (GTP cyclohydrolase 1 OS=Rhodopseudomonas palustris (strain HaA2) GN=folE PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.119e-11
Identity = 43/125 (34.40%), Postives = 64/125 (51.20%), Query Frame = 3
Query:  435 EQEPDALAIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSF 809
            +  P     E AVK LL  +GE+  REG+  TP RV +A  E  +GY Q   ++++      A  D            V+VRD+   S+C+  ++PF  K H+ Y P  +RV+GLSK   L++ F
Sbjct:   39 QPRPSRAEAEAAVKTLLSYIGENTEREGLLDTPRRVVEAYDELFQGYHQCPAEVLDRTFGETAGYD----------DFVLVRDISFTSHCEHHVMPFYGKAHIAYTPV-ERVVGLSKLARLVEIF 152          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_FINM2 (GTP cyclohydrolase 1 OS=Finegoldia magna (strain ATCC 29328) GN=folE PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.119e-11
Identity = 48/142 (33.80%), Postives = 73/142 (51.41%), Query Frame = 3
Query:  447 DALAIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEVCQLCTWY 869
            D   IE AV ++++ +GED NREG+ +TP RVA+   E   G  Q+ K  +  +      VD           +VI +D+  +S C+  LLPF  KV++ Y+P+ +RV GLSK    +  +   P+ Q RL  E+      Y
Sbjct:    2 DKEKIEQAVSMIIEAIGEDPNREGLLETPQRVARMYEEIFSGLNQDAKTHLSKSF---EIVD---------DNMVIEKDIPFYSMCEHHLLPFWGKVNIAYIPN-KRVAGLSKLARTVDVYSKKPQLQERLNIEIADALMEY 130          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_CORA7 (GTP cyclohydrolase 1 OS=Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1) GN=folE PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.119e-11
Identity = 47/140 (33.57%), Postives = 73/140 (52.14%), Query Frame = 3
Query:  435 EQEPDALAIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVP-SGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEV 848
            ++E D    E AV+ LL  +GED +REG+++TP RVA+A  E   G  Q+  +++      E               LV+VRD+ ++S C+  L+PF    H+ Y+P +   V GLSK   L   +   P+ Q RLT ++
Sbjct:    8 QREFDHERAEAAVRELLIAVGEDPDREGLRETPARVARAYAEVFAGLHQDPTEVLHKTFAEE------------HQELVLVRDIPIYSTCEHHLVPFYGTAHIGYIPGTDGHVTGLSKLARLADMYAKRPQVQERLTSQI 135          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_RHOBA (GTP cyclohydrolase 1 OS=Rhodopirellula baltica GN=folE PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.461e-11
Identity = 49/140 (35.00%), Postives = 74/140 (52.86%), Query Frame = 3
Query:  441 EPDALAIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEVCQL 857
            E D   IE AV+ +L+ +GED +R+G+ +TP RVA+   E   G   +    +   +F E   +           +V+VRD+   S C+  LLPF  K H+ Y+PSG +V+GLSK   +++     P+ Q RLT  V  L
Sbjct:   42 EVDFARIESAVREILEAVGEDPDRDGLLETPERVARMYAEMFAGLKSDPGRHL-AKVFAEDYDE-----------IVLVRDISFCSMCEHHLLPFTGKAHIAYLPSG-KVVGLSKLARVVEEVARRPQVQERLTHTVANL 168          
The following BLAST results are available for this feature:
BLAST of EY659896 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 175
Match NameE-valueIdentityDescription
GCH1_PELUB8.568e-1233.33GTP cyclohydrolase 1 OS=Pelagibacter ubique GN=fol... [more]
GCH1_BARHE8.568e-1232.81GTP cyclohydrolase 1 OS=Bartonella henselae GN=fol... [more]
GCH1_XANC51.119e-1132.58GTP cyclohydrolase 1 OS=Xanthomonas campestris pv.... [more]
GCH1_STRPG1.119e-1136.15GTP cyclohydrolase 1 OS=Streptococcus pyogenes ser... [more]
GCH1_STRP31.119e-1136.15GTP cyclohydrolase 1 OS=Streptococcus pyogenes ser... [more]
GCH1_RHOPS1.119e-1134.40GTP cyclohydrolase 1 OS=Rhodopseudomonas palustris... [more]
GCH1_RHOP21.119e-1134.40GTP cyclohydrolase 1 OS=Rhodopseudomonas palustris... [more]
GCH1_FINM21.119e-1133.80GTP cyclohydrolase 1 OS=Finegoldia magna (strain A... [more]
GCH1_CORA71.119e-1133.57GTP cyclohydrolase 1 OS=Corynebacterium aurimucosu... [more]
GCH1_RHOBA1.461e-1135.00GTP cyclohydrolase 1 OS=Rhodopirellula baltica GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-C09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659896 ID=EY659896; Name=EY659896; organism=Citrus sinensis; type=EST; length=885bp
TCAAACAACGCCGCGTCCGAATAATCATTCCCAAAAAACGTATCCTCTTT
CTTTTCCCTTACCCTCTCCCTCTACTGCTTCTGCTCCCTATCTCTTCACA
TCTCTCTTCTTCTCGCTGTTCTTATTGTCTCTGGCTACCTCTTCTTTTCT
TTTTTCCTCTCTCTCCCCTTTTTTTCTTAATTGACAGTTTTACAAAAAAT
TGATTTTTTATTTTTGTGTGTTCCAGAACCAATCTCTTTTCGAGTTTCCA
ATATCAATATCAATATCAATATCAAAGTTGTTTTGTGTGTACTTTTTTGG
GTTTTTGATTGGTTTGTTTATCTGGGTTGTTGTTATTTTGTGTGTCTCTC
AATCAAATGGGCGCTTTGGATGAGGGACATTTCGATTTGGAGCTTGAGAA
TGGAGTGAAACTGAGTAGCCTTGAGCTTGGCTTTGAGCAAGAACCAGACG
CGCTCGCTATTGAGGATGCCGTCAAAGTTCTCTTGCAAGGATTAGGTGAA
GATATTAATAGAGAAGGCATCAAGAAGACTCCTCATCGCGTTGCCAAAGC
TCTTCGTGAAGGAACCAAAGGTTACACACAAAATGTAAAAGACATTGTTG
AAGGTGCTTTGTTCCCTGAAGCANGTGTGGATCATGGAATTGGTCATGCC
GGAGGAGCAGGTGGGCTTGTGATTGTTCGAGATCTTGACCTCTTCTCATA
CTGCCAGTCTTGTTTGCTTCCTTTTCAGGTTAAAGTTCATGTANGCTATG
TGCCATCTGGTCAACGAGTTTTGGGATTAAGCAAGTCTCCAGAGTTGCTG
AAGTCTTTTCAAACGACTCCAAAACCACAGCGTCTAACAGATGAAGTGTG
TCAGCTTTGCACATGGTATCAGCCGGGCAGTGTTG
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