EY659896

Overview
NameEY659896
Unique NameEY659896
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_OCHA4 (GTP cyclohydrolase 1 OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=folE PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.461e-11
Identity = 43/123 (34.96%), Postives = 68/123 (55.28%), Query Frame = 3
Query:  441 EPDALAIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSF 809
            +P     E AV+ LL   G+D  REG+ +TP RVAKA +E   GYT++ ++++ G +F E               LV+V+D+   S+C+  ++P   K HV Y+P   +V+GLSK   ++  F
Sbjct:   27 KPTQADAEAAVRTLLLWAGDDPEREGLLETPKRVAKAYKELFAGYTESPEEVL-GTVFEEV---------GGYNDLVLVKDISFHSHCEHHMVPIIGKAHVAYLPD-HKVVGLSKIARVVDIF 138          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_CLONN (GTP cyclohydrolase 1 OS=Clostridium novyi (strain NT) GN=folE PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.461e-11
Identity = 44/131 (33.59%), Postives = 73/131 (55.73%), Query Frame = 3
Query:  459 IEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEV 848
            I+ AV ++++ +GED NREG+K+TP R+A+   E   G    +++  E  L     V+           +V+ +D+  +S C+   LPF  KVH+ Y+P+G +V+GLSK     + F   P+ Q RLT ++
Sbjct:    7 IKKAVIMIIEAIGEDPNREGLKETPDRIARMYEEIFSG----IRETPEKHLSKVFKVN--------NDDVVVEKDIQFYSMCEHHFLPFFGKVHIAYIPNG-KVVGLSKLARTTEVFSKRPQLQERLTSQI 124          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_XANAC (GTP cyclohydrolase 1 OS=Xanthomonas axonopodis pv. citri GN=folE PE=3 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.909e-11
Identity = 43/132 (32.58%), Postives = 72/132 (54.55%), Query Frame = 3
Query:  462 EDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEVCQ 854
            E+AV+ LL+  GED  REG+  TP RVA+A  +   GY    ++ +E      A  D           L+++RD+   S+C+  + P   KVHV Y+P G +V+G+SK   +++S+    + Q ++T ++ Q
Sbjct:   17 EEAVRTLLRWAGEDPTREGLLDTPRRVAEAYGDWFSGYRDEPREYLERTFEEVAGYD----------ELIVLRDISYESHCEHHMAPIIGKVHVGYLPRG-KVVGISKLARVVESYARRFQVQEKMTAQIAQ 137          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_NITMU (GTP cyclohydrolase 1 OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=folE PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.909e-11
Identity = 46/137 (33.58%), Postives = 72/137 (52.55%), Query Frame = 3
Query:  480 LLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEVCQ-LCTWYQPGSV 884
            LL+ LGED +R+G+++TP RV +A    T+GY Q+          P A +            L++VR + ++S+C+  L PF     + Y+P+G  ++GLSK   L+  F    + Q RLT +V Q L    QP +V
Sbjct:   16 LLRSLGEDPSRQGLRETPERVTRAWAHWTRGYKQD----------PAAILKTFADGGESYDELIVVRQIPVYSHCEHHLAPFFGHATIGYLPTG-HIVGLSKLTRLVNCFAARLQVQERLTQQVAQSLLEHLQPKAV 141          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_STRPJ (GTP cyclohydrolase 1 OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=folE PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.493e-11
Identity = 44/142 (30.99%), Postives = 71/142 (50.00%), Query Frame = 3
Query:  447 DALAIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEVCQLCTWY 869
            D   IE AVK++++ +GED NREG+++TP RVA+  +E   G  Q  ++ +  +                   +V+ +D+   + C+   LPF  + H+ Y+P G RV GLSK    ++ +   P+ Q RL  EV      Y
Sbjct:    2 DTQKIEAAVKMIIEAVGEDANREGLQETPARVARMYQEIFSGLGQTAEEHLSKSF------------EIIDDNMVVEKDIFFHTMCEHHFLPFYGRAHIAYIPDG-RVAGLSKLARTVEVYSKKPQIQERLNIEVADALMEY 130          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_GEOKA (GTP cyclohydrolase 1 OS=Geobacillus kaustophilus GN=folE PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.493e-11
Identity = 43/124 (34.68%), Postives = 66/124 (53.23%), Query Frame = 3
Query:  459 IEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ 830
            IE AV+++L+ +GED NREG+  TP RVAK   E   G  ++ K   +  +F E   +           LV+V+D+  +S C+  L+PF    HV Y+P   +V GLSK    +++    P+ Q
Sbjct:    9 IEYAVRLILEAIGEDPNREGLVDTPKRVAKMYAEVFAGLQEDPKQHFQ-TVFSEEHEE-----------LVLVKDIPFYSMCEHHLVPFFGAAHVAYIPREGKVTGLSKLARAVEAVARRPQLQ 120          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_STRR6 (GTP cyclohydrolase 1 OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=folE PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.256e-11
Identity = 43/135 (31.85%), Postives = 70/135 (51.85%), Query Frame = 3
Query:  447 DALAIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEV 848
            D   IE AVK++++ +GED NREG+++TP RVA+  +E   G  Q  ++ +  +                   +V+ +D+   + C+   LPF  + H+ Y+P G RV GLSK    ++ +   P+ Q RL  EV
Sbjct:    2 DTQKIEAAVKMIIEAVGEDANREGLQETPARVARMYQEIFSGLGQTAEEHLSKSF------------EIIDDNMVVEKDIFFHTMCEHHFLPFYGRAHIAYIPDG-RVAGLSKLARTVEVYSKKPQIQERLNIEV 123          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_STRPN (GTP cyclohydrolase 1 OS=Streptococcus pneumoniae GN=folE PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.256e-11
Identity = 43/135 (31.85%), Postives = 70/135 (51.85%), Query Frame = 3
Query:  447 DALAIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEV 848
            D   IE AVK++++ +GED NREG+++TP RVA+  +E   G  Q  ++ +  +                   +V+ +D+   + C+   LPF  + H+ Y+P G RV GLSK    ++ +   P+ Q RL  EV
Sbjct:    2 DTQKIEAAVKMIIEAVGEDANREGLQETPARVARMYQEIFSGLGQTAEEHLSKSF------------EIIDDNMVVEKDIFFHTMCEHHFLPFYGRAHIAYIPDG-RVAGLSKLARTVEVYSKKPQIQERLNIEV 123          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_STRP7 (GTP cyclohydrolase 1 OS=Streptococcus pneumoniae (strain 70585) GN=folE PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.256e-11
Identity = 43/135 (31.85%), Postives = 70/135 (51.85%), Query Frame = 3
Query:  447 DALAIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEV 848
            D   IE AVK++++ +GED NREG+++TP RVA+  +E   G  Q  ++ +  +                   +V+ +D+   + C+   LPF  + H+ Y+P G RV GLSK    ++ +   P+ Q RL  EV
Sbjct:    2 DTQKIEAAVKMIIEAVGEDANREGLQETPARVARMYQEIFSGLGQTAEEHLSKSF------------EIIDDNMVVEKDIFFHTMCEHHFLPFYGRAHIAYIPDG-RVAGLSKLARTVEVYSKKPQIQERLNIEV 123          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_STRP4 (GTP cyclohydrolase 1 OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=folE PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.256e-11
Identity = 43/135 (31.85%), Postives = 70/135 (51.85%), Query Frame = 3
Query:  447 DALAIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEV 848
            D   IE AVK++++ +GED NREG+++TP RVA+  +E   G  Q  ++ +  +                   +V+ +D+   + C+   LPF  + H+ Y+P G RV GLSK    ++ +   P+ Q RL  EV
Sbjct:    2 DTQKIEAAVKMIIEAVGEDANREGLQETPARVARMYQEIFSGLGQTAEEHLSKSF------------EIIDDNMVVEKDIFFHTMCEHHFLPFYGRAHIAYIPDG-RVAGLSKLARTVEVYSKKPQIQERLNIEV 123          
The following BLAST results are available for this feature:
BLAST of EY659896 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 175
Match NameE-valueIdentityDescription
GCH1_OCHA41.461e-1134.96GTP cyclohydrolase 1 OS=Ochrobactrum anthropi (str... [more]
GCH1_CLONN1.461e-1133.59GTP cyclohydrolase 1 OS=Clostridium novyi (strain ... [more]
GCH1_XANAC1.909e-1132.58GTP cyclohydrolase 1 OS=Xanthomonas axonopodis pv.... [more]
GCH1_NITMU1.909e-1133.58GTP cyclohydrolase 1 OS=Nitrosospira multiformis (... [more]
GCH1_STRPJ2.493e-1130.99GTP cyclohydrolase 1 OS=Streptococcus pneumoniae (... [more]
GCH1_GEOKA2.493e-1134.68GTP cyclohydrolase 1 OS=Geobacillus kaustophilus G... [more]
GCH1_STRR63.256e-1131.85GTP cyclohydrolase 1 OS=Streptococcus pneumoniae (... [more]
GCH1_STRPN3.256e-1131.85GTP cyclohydrolase 1 OS=Streptococcus pneumoniae G... [more]
GCH1_STRP73.256e-1131.85GTP cyclohydrolase 1 OS=Streptococcus pneumoniae (... [more]
GCH1_STRP43.256e-1131.85GTP cyclohydrolase 1 OS=Streptococcus pneumoniae s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-C09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659896 ID=EY659896; Name=EY659896; organism=Citrus sinensis; type=EST; length=885bp
TCAAACAACGCCGCGTCCGAATAATCATTCCCAAAAAACGTATCCTCTTT
CTTTTCCCTTACCCTCTCCCTCTACTGCTTCTGCTCCCTATCTCTTCACA
TCTCTCTTCTTCTCGCTGTTCTTATTGTCTCTGGCTACCTCTTCTTTTCT
TTTTTCCTCTCTCTCCCCTTTTTTTCTTAATTGACAGTTTTACAAAAAAT
TGATTTTTTATTTTTGTGTGTTCCAGAACCAATCTCTTTTCGAGTTTCCA
ATATCAATATCAATATCAATATCAAAGTTGTTTTGTGTGTACTTTTTTGG
GTTTTTGATTGGTTTGTTTATCTGGGTTGTTGTTATTTTGTGTGTCTCTC
AATCAAATGGGCGCTTTGGATGAGGGACATTTCGATTTGGAGCTTGAGAA
TGGAGTGAAACTGAGTAGCCTTGAGCTTGGCTTTGAGCAAGAACCAGACG
CGCTCGCTATTGAGGATGCCGTCAAAGTTCTCTTGCAAGGATTAGGTGAA
GATATTAATAGAGAAGGCATCAAGAAGACTCCTCATCGCGTTGCCAAAGC
TCTTCGTGAAGGAACCAAAGGTTACACACAAAATGTAAAAGACATTGTTG
AAGGTGCTTTGTTCCCTGAAGCANGTGTGGATCATGGAATTGGTCATGCC
GGAGGAGCAGGTGGGCTTGTGATTGTTCGAGATCTTGACCTCTTCTCATA
CTGCCAGTCTTGTTTGCTTCCTTTTCAGGTTAAAGTTCATGTANGCTATG
TGCCATCTGGTCAACGAGTTTTGGGATTAAGCAAGTCTCCAGAGTTGCTG
AAGTCTTTTCAAACGACTCCAAAACCACAGCGTCTAACAGATGAAGTGTG
TCAGCTTTGCACATGGTATCAGCCGGGCAGTGTTG
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