EY659892

Overview
NameEY659892
Unique NameEY659892
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length517
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659892 vs. ExPASy Swiss-Prot
Match: G3P2_RHOSH (Glyceraldehyde-3-phosphate dehydrogenase B OS=Rhodobacter sphaeroides GN=gapB PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.354e-15
Identity = 50/138 (36.23%), Postives = 75/138 (54.35%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQ--RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVV-GVN 493
            +++ INGFGRIGR V R I++  R D+E+VA+ND     +   ++ ++DSVHG++         D  +  G  P+ V  +RNP E+PWA  G +  +E TG+FT               V++SAP   A   +V GVN
Sbjct:    3 IRVAINGFGRIGRNVLRAIVESGRTDIEVVAIND-LGQVETNAHLLRFDSVHGRFP--AKVTSGDDWIDVGRGPIKVTAIRNPAELPWA--GVDMAMECTGIFTTKEKAAAHLQNGAKRVLVSAPCDGADRTIVYGVN 135          
BLAST of EY659892 vs. ExPASy Swiss-Prot
Match: G3PP_RALEH (Glyceraldehyde-3-phosphate dehydrogenase, plasmid OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbGP PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.310e-15
Identity = 55/145 (37.93%), Postives = 78/145 (53.79%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP-SKDAPMFVV-GVNENEYK 508
            +K+ ING+GRIGR V R   +   R D+E+VA+ND         ++ +YD+VHG++   E+ V  D   + G++ + V   RNP E+PW E G + V+E TG+FT               VIISAP  KD    +V GVN    K
Sbjct:    3 IKVAINGYGRIGRNVLRAHYEGGKRHDLEIVAIND-LGNAATNAHLTQYDTVHGRFPG-EVSVDGDAFRVNGDR-IRVLAQRNPAELPWGELGVDVVMECTGLFTSKEKASAHLKGGAKKVIISAPGGKDVDATIVYGVNHGVLK 144          
BLAST of EY659892 vs. ExPASy Swiss-Prot
Match: G3P_STRAU (Glyceraldehyde-3-phosphate dehydrogenase OS=Streptomyces aureofaciens GN=gap PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.017e-15
Identity = 52/144 (36.11%), Postives = 79/144 (54.86%), Query Frame = 2
Query:   92 KIGINGFGRIGRLVARVILQRD-DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPM-FVVGVNENEYKPEL 517
            +I INGFGRIGR V R +L+RD D+++VAVND       +  +  YD+  G+     + V+ +  ++ G + +TV   R P  +PWAE G + V+E+TG FT               V++SAP+  A +    GVN + Y P+L
Sbjct:    3 RIAINGFGRIGRNVLRALLERDSDLDVVAVND-LTEPATLARLLAYDTTSGRLGR-PVTVEGNVLVVDGRR-ITVTAEREPANLPWAELGVDIVLEATGRFTSAKAARAHLDAGAKKVLVSAPADGADITLAFGVNTDAYDPDL 143          
BLAST of EY659892 vs. ExPASy Swiss-Prot
Match: G3PA_SCEVA (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Scenedesmus vacuolatus GN=GapA PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.017e-15
Identity = 49/139 (35.25%), Postives = 76/139 (54.68%), Query Frame = 2
Query:  104 NGFGRIGRLVARVILQRDD--VELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK--DAPMFVVGVNENEYK 508
            NGFGRIGR   R +  R +  +E++A+ND        +++ KYDS  G++   ++K+ DD  +    K + V   R+P ++PW E   + V+E TGVF                V+I+AP+K  D P +VVGVN ++YK
Sbjct:    1 NGFGRIGRNFLRCLETRQNSLLEVIAINDSG-GVKQASHLLKYDSTLGKFDA-DVKIVDDGHISVNGKSIRVVSSRDPTKLPWGEMEIDLVIEGTGVFIDTPGASKHIEAGAKKVLITAPAKGSDIPTYVVGVNAHDYK 137          
BLAST of EY659892 vs. ExPASy Swiss-Prot
Match: G3P3_ECO57 (Glyceraldehyde-3-phosphate dehydrogenase C OS=Escherichia coli O157:H7 GN=gapC PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.017e-15
Identity = 47/137 (34.31%), Postives = 76/137 (55.47%), Query Frame = 2
Query:   92 KIGINGFGRIGRLVARVILQ-RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEN 499
            K+GINGFGRIGRLV R +L+ + ++++VA+ND   +   + Y+ K+DS +G +       +D  +L+   K + V+  +  + IPW   GAE +VE TG +T               V+ISAP+ +    V  VN++
Sbjct:    3 KVGINGFGRIGRLVLRRLLEVKSNIDVVAIND-LTSPKILAYLLKHDSNYGPFPWSVDFTED--SLIVDGKSIAVYAEKEAKNIPWKAKGAEIIVECTGFYTSAEKSQAHLDAGAKKVLISAPAGEMKTIVYKVNDD 136          
BLAST of EY659892 vs. ExPASy Swiss-Prot
Match: G3PA_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GAPA PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 5.147e-15
Identity = 52/149 (34.90%), Postives = 76/149 (51.01%), Query Frame = 2
Query:   77 IMGQVKIGINGFGRIGRLVARVILQRDD--VELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNENEYKPE 514
            +  ++K+ INGFGRIGR   R    R D  ++++A+ND        +++ KYDS  G +      V  D   + G K + V   RNP  +PW + G + V+E TGVF                V+I+AP K D P +VVGVN + Y P+
Sbjct:   54 VEAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVIAINDTG-GVKQASHLLKYDSTLGIFDADVKPVGTDGISVDG-KVIQVVSDRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADLYNPD 200          
BLAST of EY659892 vs. ExPASy Swiss-Prot
Match: G3PA_PEA (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Pisum sativum GN=GAPA PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 6.722e-15
Identity = 53/143 (37.06%), Postives = 73/143 (51.05%), Query Frame = 2
Query:   86 QVKIGINGFGRIGRLVARVILQRDD--VELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNENEY 505
            Q+K+ INGFGRIGR   R    R D  ++++A+ND        +++ KYDS  G +      V  D   + G K + V   RNP  +PW E G + V+E TGVF                V+I+AP K D P +VVGVN + Y
Sbjct:   70 QLKVAINGFGRIGRNFLRCWHGRKDSPLDVIAINDTG-GVKQASHLLKYDSTLGIFDADVKPVGTDGISVDG-KVIKVVSDRNPANLPWKELGIDLVIEGTGVFVDREGAGRHITAGAKKVLITAPGKGDIPTYVVGVNADAY 210          
BLAST of EY659892 vs. ExPASy Swiss-Prot
Match: G3P_ZYMMO (Glyceraldehyde-3-phosphate dehydrogenase OS=Zymomonas mobilis GN=gap PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 8.779e-15
Identity = 54/142 (38.03%), Postives = 75/142 (52.82%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDD--VELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVV-GVNENE 502
            VK+ INGFGRIGRL AR IL R D  +ELV +ND   + +   ++FK DS HG +        +D  ++   K + V   R+P  +P  + G + V+E TG+FT               V+ISAP+K D    VV GVN  +
Sbjct:    3 VKVAINGFGRIGRLAARAILSRPDSGLELVTIND-LGSVEGNAFLFKRDSAHGTYPGTVTTEGND--MVIDGKKIVVTAERDPANLPHKKLGVDIVMECTGIFTNTEKASAHLTAGAKKVLISAPAKGDVDRTVVYGVNHKD 141          
BLAST of EY659892 vs. ExPASy Swiss-Prot
Match: G3P_ENTAE (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Enterobacter aerogenes GN=gap PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 8.779e-15
Identity = 45/127 (35.43%), Postives = 68/127 (53.54%), Query Frame = 2
Query:  128 LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD-APMFVVGVNENEY 505
            +V R   +R D+E+V +ND  +  +YM YM KYDS HG++    ++VKD   ++ G K + V   ++P  + W E G + V E+TG+F                V+++ PSKD  PMFV G N   Y
Sbjct:    1 IVFRAAQKRSDIEIVGIND-LLDAEYMAYMLKYDSTHGRFDG-TVEVKDGHLVVNG-KTIRVTAEKDPANLKWNEIGVDVVAEATGIFLTDETARKHITAGAKKVVLTGPSKDNTPMFVRGANFETY 124          
BLAST of EY659892 vs. ExPASy Swiss-Prot
Match: G3P3_ECOLI (Putative glyceraldehyde-3-phosphate dehydrogenase C OS=Escherichia coli (strain K12) GN=gapC PE=5 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 8.779e-15
Identity = 46/137 (33.58%), Postives = 75/137 (54.74%), Query Frame = 2
Query:   92 KIGINGFGRIGRLV-ARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEN 499
            K+GINGFGRIGRLV  R++  + ++++VA+ND   +   + Y+ K+DS +G +       +D  +L+   K + V+  +  + IPW   GAE +VE TG +T               V+ISAP+ +    V  VN++
Sbjct:    3 KVGINGFGRIGRLVLGRLLEVKSNIDVVAIND-LTSPKILAYLLKHDSNYGPFPWSVDFTED--SLIVDGKSIAVYAEKEAKNIPWKAKGAEIIVECTGFYTSAEKSQAHLDAGAKKVLISAPAGEMKTIVYNVNDD 136          
The following BLAST results are available for this feature:
BLAST of EY659892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 307
Match NameE-valueIdentityDescription
G3P2_RHOSH1.354e-1536.23Glyceraldehyde-3-phosphate dehydrogenase B OS=Rhod... [more]
G3PP_RALEH2.310e-1537.93Glyceraldehyde-3-phosphate dehydrogenase, plasmid ... [more]
G3P_STRAU3.017e-1536.11Glyceraldehyde-3-phosphate dehydrogenase OS=Strept... [more]
G3PA_SCEVA3.017e-1535.25Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]
G3P3_ECO573.017e-1534.31Glyceraldehyde-3-phosphate dehydrogenase C OS=Esch... [more]
G3PA_TOBAC5.147e-1534.90Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]
G3PA_PEA6.722e-1537.06Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]
G3P_ZYMMO8.779e-1538.03Glyceraldehyde-3-phosphate dehydrogenase OS=Zymomo... [more]
G3P_ENTAE8.779e-1535.43Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
G3P3_ECOLI8.779e-1533.58Putative glyceraldehyde-3-phosphate dehydrogenase ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-C04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659892 ID=EY659892; Name=EY659892; organism=Citrus sinensis; type=EST; length=517bp
AACGGAGGCGTNCGGNTCTCCCCTTTCATACAAATGTCTTCACCACTCTT
TCACCGCTCAATTTCATCTCTCGAGAATCATGGGGCAGGTCAAGATCGGA
ATCAACGGATTCGGAAGAATTGGTAGGCTGGTGGCAAGAGTCATCTTGCA
GAGGGACGATGTTGAACTCGTTGCTGTTAATGATCCCTTTATCACAACCG
ATTACATGACATACATGTTTAAGTACGACAGTGTTCACGGTCAATGGAAG
CACCATGAATTGAAGGTTAAGGACGATAAGACCCTTCTCTTTGGTGAGAA
GCCTGTCACTGTTTTCGGTGTTAGGAACCCAGAGGAGATCCCATGGGCTG
AGACTGGAGCCGAGTATGTTGTGGAGTCGACTGGAGTCTTTACTGACAAG
GATAAGGCTGCTGCCCATTTGAAGGGTGGTGCTAAGAAAGTTATCATCTC
AGCCCCCAGCAAGGATGCTCCTATGTTTGTTGTCGGTGTCAATGAAAACG
AGTACAAACCAGAGCTC
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